Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

Click here to switch to the map view.

The map label for this gene is 118578650

Identifier: 118578650

GI number: 118578650

Start: 204566

End: 204979

Strand: Direct

Name: 118578650

Synonym: Ppro_0206

Alternate gene names: NA

Gene position: 204566-204979 (Clockwise)

Preceding gene: 118578649

Following gene: 118578651

Centisome position: 5.1

GC content: 55.8

Gene sequence:

>414_bases
ATGAGTCCTAAAATCCCACGTCCCAAGGCTGTTCCCGGCTTCACCATCGAACGCCGGTCTGCCTGCGGGAAAATTTACAC
TACCGTCACCCTGTCCCCCTCGACAGCTACGCCAATGGAAGTCTTCATCCGTTTCGGCAAGGCCGGAGGTTGTGGTTCTG
CCATGGCCGATGGCATTGCTCGCCTGGTCTCCTACGGTCTCCGTTCGGGACTGGAGCCAGTCGATGCGTTCAAGGCTCTC
ACCGGCATAGGTTGTCATCTCGGGGCCAATACCTGCCTCAACTGCGTTGCCGAATCCATAGGCATCGTTTTGGAGCATCT
GAAAACAGGGCGCGATCTCAACGACCTCATCGAGGAAGCTGACTTCGCGGCACTTAACCAAATCGGACAAGGAGCTGATC
ACCATGAAATATAG

Upstream 100 bases:

>100_bases
GATGTCTTAGTAGGACAGCGAAATTAACCATCACCCTTGGCGGGATGCATGTCATCTCCGCAAAGGAGAGGTAACCCGCC
GTCATTACAAGGAGGCATCC

Downstream 100 bases:

>100_bases
CATCAAGGACATCTTCAATATTCCCGTGAAAGAGAGTCTCTGCGTAGAAGGTCGGCCTCAGACCGACAACCCCTTCATCC
CTGAAGTTGACAGCGACTAT

Product: hypothetical protein

Products: NA

Alternate protein names: Ribonucleoside-Diphosphate Reductase Alpha Chain

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MSPKIPRPKAVPGFTIERRSACGKIYTTVTLSPSTATPMEVFIRFGKAGGCGSAMADGIARLVSYGLRSGLEPVDAFKAL
TGIGCHLGANTCLNCVAESIGIVLEHLKTGRDLNDLIEEADFAALNQIGQGADHHEI

Sequences:

>Translated_137_residues
MSPKIPRPKAVPGFTIERRSACGKIYTTVTLSPSTATPMEVFIRFGKAGGCGSAMADGIARLVSYGLRSGLEPVDAFKAL
TGIGCHLGANTCLNCVAESIGIVLEHLKTGRDLNDLIEEADFAALNQIGQGADHHEI
>Mature_136_residues
SPKIPRPKAVPGFTIERRSACGKIYTTVTLSPSTATPMEVFIRFGKAGGCGSAMADGIARLVSYGLRSGLEPVDAFKALT
GIGCHLGANTCLNCVAESIGIVLEHLKTGRDLNDLIEEADFAALNQIGQGADHHEI

Specific function: Unknown

COG id: COG0209

COG function: function code F; Ribonucleotide reductase, alpha subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14399; Mature: 14268

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPKIPRPKAVPGFTIERRSACGKIYTTVTLSPSTATPMEVFIRFGKAGGCGSAMADGIA
CCCCCCCCCCCCCCCHHHHHHCCEEEEEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHH
RLVSYGLRSGLEPVDAFKALTGIGCHLGANTCLNCVAESIGIVLEHLKTGRDLNDLIEEA
HHHHHHHHCCCCHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
DFAALNQIGQGADHHEI
HHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SPKIPRPKAVPGFTIERRSACGKIYTTVTLSPSTATPMEVFIRFGKAGGCGSAMADGIA
CCCCCCCCCCCCCCHHHHHHCCEEEEEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHH
RLVSYGLRSGLEPVDAFKALTGIGCHLGANTCLNCVAESIGIVLEHLKTGRDLNDLIEEA
HHHHHHHHCCCCHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
DFAALNQIGQGADHHEI
HHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA