Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
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Accession | NC_008609 |
Length | 4,008,000 |
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The map label for this gene is 118578650
Identifier: 118578650
GI number: 118578650
Start: 204566
End: 204979
Strand: Direct
Name: 118578650
Synonym: Ppro_0206
Alternate gene names: NA
Gene position: 204566-204979 (Clockwise)
Preceding gene: 118578649
Following gene: 118578651
Centisome position: 5.1
GC content: 55.8
Gene sequence:
>414_bases ATGAGTCCTAAAATCCCACGTCCCAAGGCTGTTCCCGGCTTCACCATCGAACGCCGGTCTGCCTGCGGGAAAATTTACAC TACCGTCACCCTGTCCCCCTCGACAGCTACGCCAATGGAAGTCTTCATCCGTTTCGGCAAGGCCGGAGGTTGTGGTTCTG CCATGGCCGATGGCATTGCTCGCCTGGTCTCCTACGGTCTCCGTTCGGGACTGGAGCCAGTCGATGCGTTCAAGGCTCTC ACCGGCATAGGTTGTCATCTCGGGGCCAATACCTGCCTCAACTGCGTTGCCGAATCCATAGGCATCGTTTTGGAGCATCT GAAAACAGGGCGCGATCTCAACGACCTCATCGAGGAAGCTGACTTCGCGGCACTTAACCAAATCGGACAAGGAGCTGATC ACCATGAAATATAG
Upstream 100 bases:
>100_bases GATGTCTTAGTAGGACAGCGAAATTAACCATCACCCTTGGCGGGATGCATGTCATCTCCGCAAAGGAGAGGTAACCCGCC GTCATTACAAGGAGGCATCC
Downstream 100 bases:
>100_bases CATCAAGGACATCTTCAATATTCCCGTGAAAGAGAGTCTCTGCGTAGAAGGTCGGCCTCAGACCGACAACCCCTTCATCC CTGAAGTTGACAGCGACTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Ribonucleoside-Diphosphate Reductase Alpha Chain
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MSPKIPRPKAVPGFTIERRSACGKIYTTVTLSPSTATPMEVFIRFGKAGGCGSAMADGIARLVSYGLRSGLEPVDAFKAL TGIGCHLGANTCLNCVAESIGIVLEHLKTGRDLNDLIEEADFAALNQIGQGADHHEI
Sequences:
>Translated_137_residues MSPKIPRPKAVPGFTIERRSACGKIYTTVTLSPSTATPMEVFIRFGKAGGCGSAMADGIARLVSYGLRSGLEPVDAFKAL TGIGCHLGANTCLNCVAESIGIVLEHLKTGRDLNDLIEEADFAALNQIGQGADHHEI >Mature_136_residues SPKIPRPKAVPGFTIERRSACGKIYTTVTLSPSTATPMEVFIRFGKAGGCGSAMADGIARLVSYGLRSGLEPVDAFKALT GIGCHLGANTCLNCVAESIGIVLEHLKTGRDLNDLIEEADFAALNQIGQGADHHEI
Specific function: Unknown
COG id: COG0209
COG function: function code F; Ribonucleotide reductase, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14399; Mature: 14268
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPKIPRPKAVPGFTIERRSACGKIYTTVTLSPSTATPMEVFIRFGKAGGCGSAMADGIA CCCCCCCCCCCCCCCHHHHHHCCEEEEEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHH RLVSYGLRSGLEPVDAFKALTGIGCHLGANTCLNCVAESIGIVLEHLKTGRDLNDLIEEA HHHHHHHHCCCCHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH DFAALNQIGQGADHHEI HHHHHHHHCCCCCCCCC >Mature Secondary Structure SPKIPRPKAVPGFTIERRSACGKIYTTVTLSPSTATPMEVFIRFGKAGGCGSAMADGIA CCCCCCCCCCCCCCHHHHHHCCEEEEEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHH RLVSYGLRSGLEPVDAFKALTGIGCHLGANTCLNCVAESIGIVLEHLKTGRDLNDLIEEA HHHHHHHHCCCCHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH DFAALNQIGQGADHHEI HHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA