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The map label for this gene is traH [H]

Identifier: 118578642

GI number: 118578642

Start: 198726

End: 200210

Strand: Direct

Name: traH [H]

Synonym: Ppro_0198

Alternate gene names: 118578642

Gene position: 198726-200210 (Clockwise)

Preceding gene: 118578641

Following gene: 118578643

Centisome position: 4.96

GC content: 57.91

Gene sequence:

>1485_bases
GTGAAACGAACCGTGATTACCAGAACCACCGCCGCCTGCCTGGCGGCAACCATTGCCTTGAACCCGGTCCTTTCCTGGTC
CGGCTGGGTCGATGACTGGGTACAGCAGAAAAGCTCCACTTCGCCCAGCTATTACGAGGGGTCAAAGCGTGGCTACTACA
CGGGCGGCAGTTTCTCTGCCAGGTGGGCAAACACCGACGACCATCTGTTCACCGCTTCTCTCCCAAAGCTGAAATCTGGC
TGCGGCGGTATCGACATGTTCCTCGGCGGGTTTTCGTTCCTGAACGTGGATTATCTGGTACAGAAGCTCCAGAACATCCT
GTCGGCAGCTCCGGCGGCAGCCTTTGACATCGCCCTGAAGACCCTGGCACCACAGGTGGCCGACACCATCAAGACCCTCG
AAGCGATCACCGACCGGCTGAACTCGCTGCAGTTGAACGATTGCAAGGCGGCCAAGGCGCTGGTGGCAACTGCTGCCAGT
CCGTTTTCGTCGGTCATGTCCGACAGCCTGAAGGCTGAGATGAAGACGGCCCAGACCGACTTCATGGTGTCGAGCGGCGC
CAAGGATCTGTATCAGGATGTCAGCAAGCTGTTCGAGAGCGAACAGAAGACCAATGCCGGCAACAAGCCTGGTGTCCCCG
GCACTACCCAGACCTCAGCCACCAGCGCTACTGCCGGGTGCCCGACTGAAGTCCTGCAAGTCTTCGGGGATGGATCGGTT
CTGGAGAACCTGGCTGGCAAGAAAGGGATGAGCAGCGAGTACGTCAAACTGGTGCGCGGCTTCATCGGCGATGTGGTGAT
CCAGAACCCGGCAACGACCGGCACGACCTACCAGGCCCAATACATTCCTCCGTGCGACAAGAACAACAGCTTCGATTCCT
TTATCAGCGGTTCCGCACAAGGACGGGATACCGCCGGGGCCTGTGCCGATATCACCGACGCCAACAAGAACCTGATGGTC
TATGTGGCCGGCAAGATGCAGTCCATCGCCACCAAGATCAAATCAAAGACAGCACTCACCGCCGACGAGGAGGCGTTTCT
CAAAAGCACTCCGTTGTCGGTCGGCCTGATCCTCAAGAATGCCACAGCCACCAACACCGAGGGCGAGGTCATCGGTAAAC
TGGCGGAACTGACTGCCCGGGCCTACGGCTACTACATGCTGCTTGATCTGTTCGGGCGTGCAGTCCAGTTGCAGGAGATG
GCCCGCAACATCATGTCTACCCAGAAAGGGAATAAAGCCGGGGCTTCGCCGGAGACCTGCCAGTTGGCGCTCCTCGGCGA
AGGTATGCAGCATATCCAGACGCTTGAGGAAAAGACGCTGCAACTTCTGAGCGTTGCCCAGCAGAGTTACGCCAATGCAG
CCTCTGAGATCAATGCAGTGGAGATGATCGTCCAGAATATGAAGAAGTTCGACGACACGGTGTTTTCGGAATTATCGGAC
CGCTTCGGCAAGGGAATCGCCATGCGGGCAACCGGTAGAATCTAA

Upstream 100 bases:

>100_bases
CAGAAGGGTGGCAGCTTCGACGTGAAGAAACGCCGTCTTCAGGAAAAGGAGCGGCCATGAGTCTGCTTGTCCTACAGCAA
CAGAGAAATGAGGTGTCAGT

Downstream 100 bases:

>100_bases
CAACAATAAAAGGGAGGAATCATGGCAGACAAGAATACCAAGGCGGATAAGGGCAACAGCGCTTCTCCGGCTTCCAGGAA
AATCGACTGGCAGGCGAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 494; Mature: 494

Protein sequence:

>494_residues
MKRTVITRTTAACLAATIALNPVLSWSGWVDDWVQQKSSTSPSYYEGSKRGYYTGGSFSARWANTDDHLFTASLPKLKSG
CGGIDMFLGGFSFLNVDYLVQKLQNILSAAPAAAFDIALKTLAPQVADTIKTLEAITDRLNSLQLNDCKAAKALVATAAS
PFSSVMSDSLKAEMKTAQTDFMVSSGAKDLYQDVSKLFESEQKTNAGNKPGVPGTTQTSATSATAGCPTEVLQVFGDGSV
LENLAGKKGMSSEYVKLVRGFIGDVVIQNPATTGTTYQAQYIPPCDKNNSFDSFISGSAQGRDTAGACADITDANKNLMV
YVAGKMQSIATKIKSKTALTADEEAFLKSTPLSVGLILKNATATNTEGEVIGKLAELTARAYGYYMLLDLFGRAVQLQEM
ARNIMSTQKGNKAGASPETCQLALLGEGMQHIQTLEEKTLQLLSVAQQSYANAASEINAVEMIVQNMKKFDDTVFSELSD
RFGKGIAMRATGRI

Sequences:

>Translated_494_residues
MKRTVITRTTAACLAATIALNPVLSWSGWVDDWVQQKSSTSPSYYEGSKRGYYTGGSFSARWANTDDHLFTASLPKLKSG
CGGIDMFLGGFSFLNVDYLVQKLQNILSAAPAAAFDIALKTLAPQVADTIKTLEAITDRLNSLQLNDCKAAKALVATAAS
PFSSVMSDSLKAEMKTAQTDFMVSSGAKDLYQDVSKLFESEQKTNAGNKPGVPGTTQTSATSATAGCPTEVLQVFGDGSV
LENLAGKKGMSSEYVKLVRGFIGDVVIQNPATTGTTYQAQYIPPCDKNNSFDSFISGSAQGRDTAGACADITDANKNLMV
YVAGKMQSIATKIKSKTALTADEEAFLKSTPLSVGLILKNATATNTEGEVIGKLAELTARAYGYYMLLDLFGRAVQLQEM
ARNIMSTQKGNKAGASPETCQLALLGEGMQHIQTLEEKTLQLLSVAQQSYANAASEINAVEMIVQNMKKFDDTVFSELSD
RFGKGIAMRATGRI
>Mature_494_residues
MKRTVITRTTAACLAATIALNPVLSWSGWVDDWVQQKSSTSPSYYEGSKRGYYTGGSFSARWANTDDHLFTASLPKLKSG
CGGIDMFLGGFSFLNVDYLVQKLQNILSAAPAAAFDIALKTLAPQVADTIKTLEAITDRLNSLQLNDCKAAKALVATAAS
PFSSVMSDSLKAEMKTAQTDFMVSSGAKDLYQDVSKLFESEQKTNAGNKPGVPGTTQTSATSATAGCPTEVLQVFGDGSV
LENLAGKKGMSSEYVKLVRGFIGDVVIQNPATTGTTYQAQYIPPCDKNNSFDSFISGSAQGRDTAGACADITDANKNLMV
YVAGKMQSIATKIKSKTALTADEEAFLKSTPLSVGLILKNATATNTEGEVIGKLAELTARAYGYYMLLDLFGRAVQLQEM
ARNIMSTQKGNKAGASPETCQLALLGEGMQHIQTLEEKTLQLLSVAQQSYANAASEINAVEMIVQNMKKFDDTVFSELSD
RFGKGIAMRATGRI

Specific function: Involved in pilus assembly [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010927 [H]

Pfam domain/function: PF06122 TraH [H]

EC number: NA

Molecular weight: Translated: 52722; Mature: 52722

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTVITRTTAACLAATIALNPVLSWSGWVDDWVQQKSSTSPSYYEGSKRGYYTGGSFSA
CCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCEECCCCCEE
RWANTDDHLFTASLPKLKSGCGGIDMFLGGFSFLNVDYLVQKLQNILSAAPAAAFDIALK
EECCCCCCEEECCCHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
TLAPQVADTIKTLEAITDRLNSLQLNDCKAAKALVATAASPFSSVMSDSLKAEMKTAQTD
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMVSSGAKDLYQDVSKLFESEQKTNAGNKPGVPGTTQTSATSATAGCPTEVLQVFGDGSV
HHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHH
LENLAGKKGMSSEYVKLVRGFIGDVVIQNPATTGTTYQAQYIPPCDKNNSFDSFISGSAQ
HHHHCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCEEEEEECCCCCCCCCHHHHHCCCCC
GRDTAGACADITDANKNLMVYVAGKMQSIATKIKSKTALTADEEAFLKSTPLSVGLILKN
CCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEEEC
ATATNTEGEVIGKLAELTARAYGYYMLLDLFGRAVQLQEMARNIMSTQKGNKAGASPETC
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE
QLALLGEGMQHIQTLEEKTLQLLSVAQQSYANAASEINAVEMIVQNMKKFDDTVFSELSD
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFGKGIAMRATGRI
HHCCCEEEEECCCC
>Mature Secondary Structure
MKRTVITRTTAACLAATIALNPVLSWSGWVDDWVQQKSSTSPSYYEGSKRGYYTGGSFSA
CCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCEECCCCCEE
RWANTDDHLFTASLPKLKSGCGGIDMFLGGFSFLNVDYLVQKLQNILSAAPAAAFDIALK
EECCCCCCEEECCCHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
TLAPQVADTIKTLEAITDRLNSLQLNDCKAAKALVATAASPFSSVMSDSLKAEMKTAQTD
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMVSSGAKDLYQDVSKLFESEQKTNAGNKPGVPGTTQTSATSATAGCPTEVLQVFGDGSV
HHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHH
LENLAGKKGMSSEYVKLVRGFIGDVVIQNPATTGTTYQAQYIPPCDKNNSFDSFISGSAQ
HHHHCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCEEEEEECCCCCCCCCHHHHHCCCCC
GRDTAGACADITDANKNLMVYVAGKMQSIATKIKSKTALTADEEAFLKSTPLSVGLILKN
CCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEEEC
ATATNTEGEVIGKLAELTARAYGYYMLLDLFGRAVQLQEMARNIMSTQKGNKAGASPETC
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE
QLALLGEGMQHIQTLEEKTLQLLSVAQQSYANAASEINAVEMIVQNMKKFDDTVFSELSD
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFGKGIAMRATGRI
HHCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1348105; 7915817; 2656408 [H]