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The map label for this gene is 118578626

Identifier: 118578626

GI number: 118578626

Start: 183760

End: 184530

Strand: Direct

Name: 118578626

Synonym: Ppro_0182

Alternate gene names: NA

Gene position: 183760-184530 (Clockwise)

Preceding gene: 118578625

Following gene: 118578627

Centisome position: 4.58

GC content: 51.75

Gene sequence:

>771_bases
ATGCCGTCACAACATGATACGATTTCTTCCTTGGTTGTGCGCGAGATCCAGGCAAAGAGCATCCTCTCCGTATCCAAGAT
ATATTCCTATGTGATCAATCCGTACGTCGGCTGCCAACATGCTTGCTCGTACTGTTATGCCCGCTATATGAAAAAGTTCA
CCGGGCATAAGGAGCCATGGGGCACCTTCGTCGATGTCAAAATAAATGCCGCCGAGTTGCTACAAAAGGAAATCGGCAAG
AAAAAGAAGGATTCCGTATGGATCAGCGGCGTGTGCGACCCGTATCAGCCGTTGGAGGCGGAATACAGATTGACTAGGCG
CTGCCTGCAGATCCTGGCTGACTATGACTGGCCGGTGGTCGTTCAGACCCGATCACCATTGGTGCTCAGAGATATCGATA
TTTTTAAGGTAGTGAAGGGAATTGAAGTAGGGTTTTCTGTCACGACCGCAGATGATAACATCAGAAAACTGTTCGAGCCC
CATGCCCCGTCGATAGCGGAGCGATTGAACGCGCTGGCAGAGCTACACCGTCAAGGGATCAGAACGTACGCGATGATCGC
TCCTCTCCTCCCCGGAGCGGAAAGCCTGGTGGCGTTGTTTGACGGGAGTGTTGATTATATCTTGGTTGATCGCATGAATT
ATCACTACGCCGACGCCATTTACCGGAGTTGTCGGCTGGAAGACAAACACACTGAAGCCTATTTCACCTGGGCGAGCCAG
AGGATCAAAGCCGAGAGTGACCGCCGGGGGATTGAGTGCACCATCGTATAG

Upstream 100 bases:

>100_bases
CGGCGGAACTCATGCAGGCATGGCAGGTCTCAAAACTCGCCAACAGCCTGGCGCACGACAGCGAAGAATGCATCCGCCGC
GTAGCTTGATGGAGGAGCGA

Downstream 100 bases:

>100_bases
CAAACGATGAGGTCCTTGATCATAATAACAATGAATGTGTGAAAGGAACTTTCATGGATGAAATATCTGTCGAACGTGCA
CCAGATACTACCAAACTTGA

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MPSQHDTISSLVVREIQAKSILSVSKIYSYVINPYVGCQHACSYCYARYMKKFTGHKEPWGTFVDVKINAAELLQKEIGK
KKKDSVWISGVCDPYQPLEAEYRLTRRCLQILADYDWPVVVQTRSPLVLRDIDIFKVVKGIEVGFSVTTADDNIRKLFEP
HAPSIAERLNALAELHRQGIRTYAMIAPLLPGAESLVALFDGSVDYILVDRMNYHYADAIYRSCRLEDKHTEAYFTWASQ
RIKAESDRRGIECTIV

Sequences:

>Translated_256_residues
MPSQHDTISSLVVREIQAKSILSVSKIYSYVINPYVGCQHACSYCYARYMKKFTGHKEPWGTFVDVKINAAELLQKEIGK
KKKDSVWISGVCDPYQPLEAEYRLTRRCLQILADYDWPVVVQTRSPLVLRDIDIFKVVKGIEVGFSVTTADDNIRKLFEP
HAPSIAERLNALAELHRQGIRTYAMIAPLLPGAESLVALFDGSVDYILVDRMNYHYADAIYRSCRLEDKHTEAYFTWASQ
RIKAESDRRGIECTIV
>Mature_255_residues
PSQHDTISSLVVREIQAKSILSVSKIYSYVINPYVGCQHACSYCYARYMKKFTGHKEPWGTFVDVKINAAELLQKEIGKK
KKDSVWISGVCDPYQPLEAEYRLTRRCLQILADYDWPVVVQTRSPLVLRDIDIFKVVKGIEVGFSVTTADDNIRKLFEPH
APSIAERLNALAELHRQGIRTYAMIAPLLPGAESLVALFDGSVDYILVDRMNYHYADAIYRSCRLEDKHTEAYFTWASQR
IKAESDRRGIECTIV

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 29245; Mature: 29114

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSQHDTISSLVVREIQAKSILSVSKIYSYVINPYVGCQHACSYCYARYMKKFTGHKEPW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC
GTFVDVKINAAELLQKEIGKKKKDSVWISGVCDPYQPLEAEYRLTRRCLQILADYDWPVV
CCEEEEEECHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEE
VQTRSPLVLRDIDIFKVVKGIEVGFSVTTADDNIRKLFEPHAPSIAERLNALAELHRQGI
EECCCCEEEEHHHHHHHHHHHHCCEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RTYAMIAPLLPGAESLVALFDGSVDYILVDRMNYHYADAIYRSCRLEDKHTEAYFTWASQ
HHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCHHHEEHHHH
RIKAESDRRGIECTIV
HHCCCCCCCCCEEEEC
>Mature Secondary Structure 
PSQHDTISSLVVREIQAKSILSVSKIYSYVINPYVGCQHACSYCYARYMKKFTGHKEPW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC
GTFVDVKINAAELLQKEIGKKKKDSVWISGVCDPYQPLEAEYRLTRRCLQILADYDWPVV
CCEEEEEECHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEE
VQTRSPLVLRDIDIFKVVKGIEVGFSVTTADDNIRKLFEPHAPSIAERLNALAELHRQGI
EECCCCEEEEHHHHHHHHHHHHCCEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RTYAMIAPLLPGAESLVALFDGSVDYILVDRMNYHYADAIYRSCRLEDKHTEAYFTWASQ
HHHHHHHHCCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCHHHEEHHHH
RIKAESDRRGIECTIV
HHCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]