Click here to switch to the map view.

The map label for this gene is 118578553

Identifier: 118578553

GI number: 118578553

Start: 120219

End: 121577

Strand: Direct

Name: 118578553

Synonym: Ppro_0106

Alternate gene names: NA

Gene position: 120219-121577 (Clockwise)

Preceding gene: 118578551

Following gene: 118578555

Centisome position: 3.0

GC content: 55.56

Gene sequence:

>1359_bases
ATGAAATCAAAGTTTATTGAAGTTGACCGGGAAACACCCTATCTGCTCCCGCCATCGCTGCAGGATTGGCTACCAGAAAA
GCACTTGGCCCGGTTTGTGGTCGAAATTGTCGAACAGCTCGACCTGCGCTCTTTGAAAGCTACCTATGCCGGCCGAGGCT
CGCAGCCCTATAACCCTGAGATGCTGGTAGCATTGTTGTTTTACGGTTATGCGACAGGCGTATTCTCCAGCCGGAAGCTT
GAGCGCAGCACCTACGACTCCGTGGCATTCCGGTTCATAGCGGCAAACAGTCATCCTGACCACGATACCATTGCCACCTT
CCGCCGGCGGTTTCTGCCGCAACTGAACAAGCTGTTTGCCCAGATTCTGCTGATCGCTCATCAGATGGAGGTGCTGAAAC
TGGGCAACGTTAGTTTGGATGGCAGCAAAATCAAGGCGAATGCCTCCAAGCACAAGGCGCTGAGCTATGAGCATGCCTGC
AAGCTTGAAGAGCAGATCAAGGCTGAGGTTGGCGAACTGCTCAAAAAGGCCGAGGCAGCGGACCATGCCGATATTCCGGA
CGGCATGAACATCCCCGAAGAACTGGAACGTCGGGAAAAGCGTCTTTCCGCCATTGCCGCAGCCAAGGTCGAGATCAAAA
AACGTGCCGCTGAGCGCCATGCTCGTGAACAGGCCGCTTATGAGAAGAAAGTCGCCGAACGGGCCAAGAAGGAGCAGGCA
ACGGGCAAGAAGGCCAAGGGGAAAGAGCCGAAACCGCCCAAATCCGGCCCCACTGCCAAAGATCAGGTCAATCTGACCGA
TGAAGAGTCGCGGATCATGCCGACCTCCGGTGGCGGATTCGAGCAGACGTACAACGCCCAGGCCGGTGTGGATACGGCAT
CAAAGCTCATCGTTTCGGCCCATGTTACCCAGAATCCCAATGACAAACAGGAGCTGACACCGACCCTGGAGAACCTGGCG
GCGCTGCCTGAGAAGCTTGGCAAGGCAACCGATCTGGTAGCTGACAGTGGCTACTTCAGCGAAACCAATGTAACTGCCTG
TGAGGAGAACGGGATAACTCCCTACATTGCCGTAGACCGGCAGAGTCACAACGTGCCACTGATGGAGCGCTTTGCCGAAC
CGCCGCCGTTACCCGAAGATGCCGATTCCGTGGCCAGAATGAAGCATCGCCTGAAGACACCTTCCGGCAAGGCGATCTAC
GCCCAGCGAAAAGTCACCTCGGAACCGGTCTTCGGCATCATCAAGGCGGTCATGGGATTCAGAAGCTTTCTTCTTCGTGG
CTTTGAAGCAGTAAAAGGCGAATGGAACCTCGTCTGCATGGCCTACAACATCAAACGGCTGCATGTCTTGGCCGGATAG

Upstream 100 bases:

>100_bases
CTGTATTTATTGAATAAGTCGTCAGCTTTAGCTTGCGTTTTCTTGGTGTATCCCGTATATTTGTCCGGTAATATCAACTG
GTTAGGTATCGGGGTTGACT

Downstream 100 bases:

>100_bases
AATGAGAAATAGCGAAAATCAGCCTGTAATAACCGCAGTCATCGCTGAAAGGGCTGAATTAACCAGGTTGCCGGTGGGAA
GACGAACACATACGGAACTT

Product: transposase, IS4 family protein

Products: NA

Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; ISPsy6 Transposase; Transposase IS4 Family; Transposase Is4 Family Protein; ISCps6 Transposase; Transglycosylase Domain-Containing Protein; ISNCY Family Transposase; ISCpe5 Transposase; ISPpu20 Transposase; ISKpn6-Like Transposase; Transposase Is4 Family; Transposase ISNCY Family Protein

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MKSKFIEVDRETPYLLPPSLQDWLPEKHLARFVVEIVEQLDLRSLKATYAGRGSQPYNPEMLVALLFYGYATGVFSSRKL
ERSTYDSVAFRFIAANSHPDHDTIATFRRRFLPQLNKLFAQILLIAHQMEVLKLGNVSLDGSKIKANASKHKALSYEHAC
KLEEQIKAEVGELLKKAEAADHADIPDGMNIPEELERREKRLSAIAAAKVEIKKRAAERHAREQAAYEKKVAERAKKEQA
TGKKAKGKEPKPPKSGPTAKDQVNLTDEESRIMPTSGGGFEQTYNAQAGVDTASKLIVSAHVTQNPNDKQELTPTLENLA
ALPEKLGKATDLVADSGYFSETNVTACEENGITPYIAVDRQSHNVPLMERFAEPPPLPEDADSVARMKHRLKTPSGKAIY
AQRKVTSEPVFGIIKAVMGFRSFLLRGFEAVKGEWNLVCMAYNIKRLHVLAG

Sequences:

>Translated_452_residues
MKSKFIEVDRETPYLLPPSLQDWLPEKHLARFVVEIVEQLDLRSLKATYAGRGSQPYNPEMLVALLFYGYATGVFSSRKL
ERSTYDSVAFRFIAANSHPDHDTIATFRRRFLPQLNKLFAQILLIAHQMEVLKLGNVSLDGSKIKANASKHKALSYEHAC
KLEEQIKAEVGELLKKAEAADHADIPDGMNIPEELERREKRLSAIAAAKVEIKKRAAERHAREQAAYEKKVAERAKKEQA
TGKKAKGKEPKPPKSGPTAKDQVNLTDEESRIMPTSGGGFEQTYNAQAGVDTASKLIVSAHVTQNPNDKQELTPTLENLA
ALPEKLGKATDLVADSGYFSETNVTACEENGITPYIAVDRQSHNVPLMERFAEPPPLPEDADSVARMKHRLKTPSGKAIY
AQRKVTSEPVFGIIKAVMGFRSFLLRGFEAVKGEWNLVCMAYNIKRLHVLAG
>Mature_452_residues
MKSKFIEVDRETPYLLPPSLQDWLPEKHLARFVVEIVEQLDLRSLKATYAGRGSQPYNPEMLVALLFYGYATGVFSSRKL
ERSTYDSVAFRFIAANSHPDHDTIATFRRRFLPQLNKLFAQILLIAHQMEVLKLGNVSLDGSKIKANASKHKALSYEHAC
KLEEQIKAEVGELLKKAEAADHADIPDGMNIPEELERREKRLSAIAAAKVEIKKRAAERHAREQAAYEKKVAERAKKEQA
TGKKAKGKEPKPPKSGPTAKDQVNLTDEESRIMPTSGGGFEQTYNAQAGVDTASKLIVSAHVTQNPNDKQELTPTLENLA
ALPEKLGKATDLVADSGYFSETNVTACEENGITPYIAVDRQSHNVPLMERFAEPPPLPEDADSVARMKHRLKTPSGKAIY
AQRKVTSEPVFGIIKAVMGFRSFLLRGFEAVKGEWNLVCMAYNIKRLHVLAG

Specific function: Unknown

COG id: COG3666

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50287; Mature: 50287

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKFIEVDRETPYLLPPSLQDWLPEKHLARFVVEIVEQLDLRSLKATYAGRGSQPYNPE
CCCCEEEECCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
MLVALLFYGYATGVFSSRKLERSTYDSVAFRFIAANSHPDHDTIATFRRRFLPQLNKLFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
QILLIAHQMEVLKLGNVSLDGSKIKANASKHKALSYEHACKLEEQIKAEVGELLKKAEAA
HHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC
DHADIPDGMNIPEELERREKRLSAIAAAKVEIKKRAAERHAREQAAYEKKVAERAKKEQA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGKKAKGKEPKPPKSGPTAKDQVNLTDEESRIMPTSGGGFEQTYNAQAGVDTASKLIVSA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHE
HVTQNPNDKQELTPTLENLAALPEKLGKATDLVADSGYFSETNVTACEENGITPYIAVDR
ECCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCEEECCCCCCCEEEECC
QSHNVPLMERFAEPPPLPEDADSVARMKHRLKTPSGKAIYAQRKVTSEPVFGIIKAVMGF
CCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHH
RSFLLRGFEAVKGEWNLVCMAYNIKRLHVLAG
HHHHHHHHHHHCCCCEEEEEEECCEEEEEECC
>Mature Secondary Structure
MKSKFIEVDRETPYLLPPSLQDWLPEKHLARFVVEIVEQLDLRSLKATYAGRGSQPYNPE
CCCCEEEECCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
MLVALLFYGYATGVFSSRKLERSTYDSVAFRFIAANSHPDHDTIATFRRRFLPQLNKLFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
QILLIAHQMEVLKLGNVSLDGSKIKANASKHKALSYEHACKLEEQIKAEVGELLKKAEAA
HHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC
DHADIPDGMNIPEELERREKRLSAIAAAKVEIKKRAAERHAREQAAYEKKVAERAKKEQA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGKKAKGKEPKPPKSGPTAKDQVNLTDEESRIMPTSGGGFEQTYNAQAGVDTASKLIVSA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHE
HVTQNPNDKQELTPTLENLAALPEKLGKATDLVADSGYFSETNVTACEENGITPYIAVDR
ECCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCEEECCCCCCCEEEECC
QSHNVPLMERFAEPPPLPEDADSVARMKHRLKTPSGKAIYAQRKVTSEPVFGIIKAVMGF
CCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHH
RSFLLRGFEAVKGEWNLVCMAYNIKRLHVLAG
HHHHHHHHHHHCCCCEEEEEEECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA