| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is levR [H]
Identifier: 118480239
GI number: 118480239
Start: 4941137
End: 4943812
Strand: Direct
Name: levR [H]
Synonym: BALH_4697
Alternate gene names: 118480239
Gene position: 4941137-4943812 (Clockwise)
Preceding gene: 118480238
Following gene: 118480241
Centisome position: 93.99
GC content: 35.76
Gene sequence:
>2676_bases ATGAAACGAATAGATCTCATTTTTAACGCAATACAAGAAGGCAAGTATACAGAAGGTGTAACCGCATCAGAACTCGCTAC CCTGTTGCAACTAGATCGCGCCAATGTAAGTAGCGACTTAAACAAACTTGTAAAAGATAAACGTTTATTAAAAACAAATA CGCGTCCTGTTCGTTTTTATATAGAAACGAACACTTTGTTGGAAACGCATTCAAAAGAGGTAACTTCATTAGATACATTT GCAATTGAAAATACGAGCCTTAAAATCGCAATTGAAAAAGCGAAAGCTTCTATTCTCTATCCTCCAAACGGTATGCATAC TTTACTGCTCGGAGAAACGGGCGTCGGAAAATCTATGTTTGCTTCTTTAATGCACGAATATGCAATTGAAGTGGAACAGC TTCCTAAAAACGCACCATTTATCGTCTTTAACTGTGCTGATTATGCAAATAATCCACAGCTACTACTCGGGCAGTTATTT GGGATTAAAAAAGGAGCTTATACAGGGGCAAGTGATCAAAAAGGGTTAATTGAAAAAGCACATGAAGGAATTCTTTTCTT AGATGAAGTACATCGCCTTCCTCCAGAGGGACAAGAAATGCTTTTCACCTTTATTGACCGCGGAGTATATCGCCGCCTTG GAGAAACAGAAAACGAGCGTAAAGCACAAGTATTAATCATTACTGCAACAACAGAAGAACCAAATTCATTTTTATTAAAA ACATTTACAAGACGTATACCAATGACTGTCACATTGCCACCACTTCGTGAGCGTACACATAAAGAACGTTTTGCTTTACT GCAACTATTTTTCACAAATGAAGCAATTCGCTTGCGAAAAGAAATTCACGTTAGTCCGAATGCAATGCGTGCTTTCGTCT TTTACAATTGTCCTAATAACATCGGTCAATTAAAAACGGATGTACAAATTGCCTGTGCGAAAGCCTATTCTGACTTCGTG ACAAAGAAACGTGATTCTGTCTATGTTTCAAGTACAGACTTACCTTGGTATATGAAAGAAGGACTATTCATTGAAAGAAA GAGCCGTCACCTATACCAAATACCAAATGAAACATTTATATTTACAAGTGATGAAGGTTGGAGTAATCATAAAATAGAAA ATGAAAAACAATCTTCTATTTACGATTATATTGATTATAAATATGAAGAACTTCAAGCGCGTGGTATTGAAGAAGAAGAA TTAGAGTTGCTAATAGAAAATGATATTCAAAGCTTTTTCGTACAATATTTTAACCAAATGTCAAAAAAGACAAGTCATGA AAATGTTTTTAAAATTGTGGATCGTAATATCGTTTCCGTTTGTGAAAGAATTGCAGAACTGGCTGAAAAACATTTATCTA AGACGTTTGATGAAAAAGTATTTCTCGCTTTAAGTTTACATGTACAGACAACTCTACAACGTTTACAAGCTGGAAAACAA ATTCATCACCCACAATTAAATCAAATTCGTACGAAATATAAAGAAGCTTTTTCCGTAGCAATGCAATGCATTCAACTACT GGAGGATGAATTACAAATAACAATGCCTATCGATGAAGCAGGCTTTTTAACAATGTTCTTCGTTGTTGATCCAATTCCTG CCTCACAAACAGAAGTAAAAGTATTAATATTAGCGCACGGCAACGGCATAGCAACAGAAATGGCAAACGTCGCAAACGAA CTGCTCGGCATTGATGAAGTAACCGGGATCGATATGCCGTTACATGAATCGCCGAAAGATTTCTTAGAGCGTGTGAAAGT GTATATGAAAACACTCCAAAATGTAAACGGGCTTCTCTTACTCGTTGATATGGGATCACTCGCTTACATTGGTGATATAT TAGAAACTGAGTTCAAAATCCCGGTACGTGTTCTTTCCATGACAAGCACTCCACATGCACTAGAAGCTGCTCGAAAAGCT CAGCTTGGCTACTCGTTAGATGCATTATATGAAACAGTGAAGAACTTAACACCGTTTTACTTAAACGTACAAGAAGAAAA GAAAAAGCCGCTATCACCAATGAAATCTGTTATTTTGACAGCTTGTTTAACTGGGGAAGGTAGTGCTTTAGCTATTCAAA AAATGTTGGAGAACTATTTGCGATTTGACAAAGACTTAATTGAAATTATTCCGATTAGTATCGTCCATGAAAAAGATTTA ACAAAAATGATTGAGAACATAAAAAAAGAGCGAAATATCATTTGTATTGTTACGAATTTTGATGTACAAGTGCCATGCTT AACTTATCACTTCCAAGACATTGTAAACTACACAGCAATTCAGCCAATTCAAGAATTAATTACGTATGAAGAAACATATG CAAAAATGGCTGATATCCTTGAACAACAAATGCAGCGTAACGACGGAGCATTACTTATTAAAACGATCCGTTACGCATTA AATACAATTCAAGAATTAATTTCCTTACAGCTAACTCCTGACAGTTTAATGGGTGTTATTCTGCATATGAGCTGTATGGT TGACCGTCTTCAAAAAGGAGAAAGCCTCCTCCCTCATCCGGATAAAGAGAAACGAAGACAAGATGAATACTGGATGTATA TGAAAGTAAAAAAAGCATTGCAGCCAATTGAAAATACATTTGAAATACAAATACCTGATGACGAAGTGTTTTATGTAATG GACTTCTTCATTAAAAATCAGCCCGTAAAAAATTAG
Upstream 100 bases:
>100_bases TTTAGTACCTATATACTAAAGCTGTTTTATTTTTCTCTTCCCACCCTTCCCATTTTTGTGTAAAATTTTAAATAGTGATG AAGTTTCGAGGTGAATAGAA
Downstream 100 bases:
>100_bases TCACGGCAGTTTTTTAGTATATTGATCTTAACTCAGATTTTATCAGCGATTTTCAGGATATATCAGCGCAACTCGGGTTT TATCAGCGATTTTCAAAATA
Product: transcriptional antiterminator
Products: NA
Alternate protein names: Putative phosphotransferase EIIA component; Putative PTS system EIIA component [H]
Number of amino acids: Translated: 891; Mature: 891
Protein sequence:
>891_residues MKRIDLIFNAIQEGKYTEGVTASELATLLQLDRANVSSDLNKLVKDKRLLKTNTRPVRFYIETNTLLETHSKEVTSLDTF AIENTSLKIAIEKAKASILYPPNGMHTLLLGETGVGKSMFASLMHEYAIEVEQLPKNAPFIVFNCADYANNPQLLLGQLF GIKKGAYTGASDQKGLIEKAHEGILFLDEVHRLPPEGQEMLFTFIDRGVYRRLGETENERKAQVLIITATTEEPNSFLLK TFTRRIPMTVTLPPLRERTHKERFALLQLFFTNEAIRLRKEIHVSPNAMRAFVFYNCPNNIGQLKTDVQIACAKAYSDFV TKKRDSVYVSSTDLPWYMKEGLFIERKSRHLYQIPNETFIFTSDEGWSNHKIENEKQSSIYDYIDYKYEELQARGIEEEE LELLIENDIQSFFVQYFNQMSKKTSHENVFKIVDRNIVSVCERIAELAEKHLSKTFDEKVFLALSLHVQTTLQRLQAGKQ IHHPQLNQIRTKYKEAFSVAMQCIQLLEDELQITMPIDEAGFLTMFFVVDPIPASQTEVKVLILAHGNGIATEMANVANE LLGIDEVTGIDMPLHESPKDFLERVKVYMKTLQNVNGLLLLVDMGSLAYIGDILETEFKIPVRVLSMTSTPHALEAARKA QLGYSLDALYETVKNLTPFYLNVQEEKKKPLSPMKSVILTACLTGEGSALAIQKMLENYLRFDKDLIEIIPISIVHEKDL TKMIENIKKERNIICIVTNFDVQVPCLTYHFQDIVNYTAIQPIQELITYEETYAKMADILEQQMQRNDGALLIKTIRYAL NTIQELISLQLTPDSLMGVILHMSCMVDRLQKGESLLPHPDKEKRRQDEYWMYMKVKKALQPIENTFEIQIPDDEVFYVM DFFIKNQPVKN
Sequences:
>Translated_891_residues MKRIDLIFNAIQEGKYTEGVTASELATLLQLDRANVSSDLNKLVKDKRLLKTNTRPVRFYIETNTLLETHSKEVTSLDTF AIENTSLKIAIEKAKASILYPPNGMHTLLLGETGVGKSMFASLMHEYAIEVEQLPKNAPFIVFNCADYANNPQLLLGQLF GIKKGAYTGASDQKGLIEKAHEGILFLDEVHRLPPEGQEMLFTFIDRGVYRRLGETENERKAQVLIITATTEEPNSFLLK TFTRRIPMTVTLPPLRERTHKERFALLQLFFTNEAIRLRKEIHVSPNAMRAFVFYNCPNNIGQLKTDVQIACAKAYSDFV TKKRDSVYVSSTDLPWYMKEGLFIERKSRHLYQIPNETFIFTSDEGWSNHKIENEKQSSIYDYIDYKYEELQARGIEEEE LELLIENDIQSFFVQYFNQMSKKTSHENVFKIVDRNIVSVCERIAELAEKHLSKTFDEKVFLALSLHVQTTLQRLQAGKQ IHHPQLNQIRTKYKEAFSVAMQCIQLLEDELQITMPIDEAGFLTMFFVVDPIPASQTEVKVLILAHGNGIATEMANVANE LLGIDEVTGIDMPLHESPKDFLERVKVYMKTLQNVNGLLLLVDMGSLAYIGDILETEFKIPVRVLSMTSTPHALEAARKA QLGYSLDALYETVKNLTPFYLNVQEEKKKPLSPMKSVILTACLTGEGSALAIQKMLENYLRFDKDLIEIIPISIVHEKDL TKMIENIKKERNIICIVTNFDVQVPCLTYHFQDIVNYTAIQPIQELITYEETYAKMADILEQQMQRNDGALLIKTIRYAL NTIQELISLQLTPDSLMGVILHMSCMVDRLQKGESLLPHPDKEKRRQDEYWMYMKVKKALQPIENTFEIQIPDDEVFYVM DFFIKNQPVKN >Mature_891_residues MKRIDLIFNAIQEGKYTEGVTASELATLLQLDRANVSSDLNKLVKDKRLLKTNTRPVRFYIETNTLLETHSKEVTSLDTF AIENTSLKIAIEKAKASILYPPNGMHTLLLGETGVGKSMFASLMHEYAIEVEQLPKNAPFIVFNCADYANNPQLLLGQLF GIKKGAYTGASDQKGLIEKAHEGILFLDEVHRLPPEGQEMLFTFIDRGVYRRLGETENERKAQVLIITATTEEPNSFLLK TFTRRIPMTVTLPPLRERTHKERFALLQLFFTNEAIRLRKEIHVSPNAMRAFVFYNCPNNIGQLKTDVQIACAKAYSDFV TKKRDSVYVSSTDLPWYMKEGLFIERKSRHLYQIPNETFIFTSDEGWSNHKIENEKQSSIYDYIDYKYEELQARGIEEEE LELLIENDIQSFFVQYFNQMSKKTSHENVFKIVDRNIVSVCERIAELAEKHLSKTFDEKVFLALSLHVQTTLQRLQAGKQ IHHPQLNQIRTKYKEAFSVAMQCIQLLEDELQITMPIDEAGFLTMFFVVDPIPASQTEVKVLILAHGNGIATEMANVANE LLGIDEVTGIDMPLHESPKDFLERVKVYMKTLQNVNGLLLLVDMGSLAYIGDILETEFKIPVRVLSMTSTPHALEAARKA QLGYSLDALYETVKNLTPFYLNVQEEKKKPLSPMKSVILTACLTGEGSALAIQKMLENYLRFDKDLIEIIPISIVHEKDL TKMIENIKKERNIICIVTNFDVQVPCLTYHFQDIVNYTAIQPIQELITYEETYAKMADILEQQMQRNDGALLIKTIRYAL NTIQELISLQLTPDSLMGVILHMSCMVDRLQKGESLLPHPDKEKRRQDEYWMYMKVKKALQPIENTFEIQIPDDEVFYVM DFFIKNQPVKN
Specific function: Involved in positive regulation of the levanase operon which comprises the levDEFG genes for a fructose PTS system, and sacA for levanase [H]
COG id: COG1221
COG function: function code KT; Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 sigma-54 factor interaction domain [H]
Homologues:
Organism=Escherichia coli, GI1790437, Length=246, Percent_Identity=29.2682926829268, Blast_Score=90, Evalue=8e-19, Organism=Escherichia coli, GI1789233, Length=213, Percent_Identity=31.924882629108, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI1788550, Length=214, Percent_Identity=31.7757009345794, Blast_Score=87, Evalue=5e-18, Organism=Escherichia coli, GI87082117, Length=213, Percent_Identity=32.8638497652582, Blast_Score=85, Evalue=2e-17, Organism=Escherichia coli, GI87081872, Length=254, Percent_Identity=31.496062992126, Blast_Score=84, Evalue=4e-17, Organism=Escherichia coli, GI1786524, Length=229, Percent_Identity=31.0043668122271, Blast_Score=81, Evalue=3e-16, Organism=Escherichia coli, GI1788905, Length=228, Percent_Identity=31.5789473684211, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI87082152, Length=258, Percent_Identity=30.6201550387597, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1790299, Length=215, Percent_Identity=32.093023255814, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI1787583, Length=249, Percent_Identity=26.9076305220884, Blast_Score=79, Evalue=2e-15, Organism=Escherichia coli, GI1789087, Length=213, Percent_Identity=33.3333333333333, Blast_Score=78, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR011608 - InterPro: IPR004701 - InterPro: IPR002078 - InterPro: IPR001550 [H]
Pfam domain/function: PF03610 EIIA-man; PF00874 PRD; PF00158 Sigma54_activat [H]
EC number: NA
Molecular weight: Translated: 102303; Mature: 102303
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: PS00690 DEAH_ATP_HELICASE ; PS00676 SIGMA54_INTERACT_2 ; PS50045 SIGMA54_INTERACT_4 ; PS51096 PTS_EIIA_TYPE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIDLIFNAIQEGKYTEGVTASELATLLQLDRANVSSDLNKLVKDKRLLKTNTRPVRFY CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEE IETNTLLETHSKEVTSLDTFAIENTSLKIAIEKAKASILYPPNGMHTLLLGETGVGKSMF EECCCHHHHCCCHHHHHHHEEEECCEEEEEEEECCCEEEECCCCCEEEEEECCCCCHHHH ASLMHEYAIEVEQLPKNAPFIVFNCADYANNPQLLLGQLFGIKKGAYTGASDQKGLIEKA HHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH HEGILFLDEVHRLPPEGQEMLFTFIDRGVYRRLGETENERKAQVLIITATTEEPNSFLLK HCCEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCHHHHH TFTRRIPMTVTLPPLRERTHKERFALLQLFFTNEAIRLRKEIHVSPNAMRAFVFYNCPNN HHHHHCCEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEEECCCC IGQLKTDVQIACAKAYSDFVTKKRDSVYVSSTDLPWYMKEGLFIERKSRHLYQIPNETFI CCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHCCEEEEECCCCEEECCCCEEE FTSDEGWSNHKIENEKQSSIYDYIDYKYEELQARGIEEEELELLIENDIQSFFVQYFNQM EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH SKKTSHENVFKIVDRNIVSVCERIAELAEKHLSKTFDEKVFLALSLHVQTTLQRLQAGKQ HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHCCCC IHHPQLNQIRTKYKEAFSVAMQCIQLLEDELQITMPIDEAGFLTMFFVVDPIPASQTEVK CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEECCCCCCCCCEE VLILAHGNGIATEMANVANELLGIDEVTGIDMPLHESPKDFLERVKVYMKTLQNVNGLLL EEEEECCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEE LVDMGSLAYIGDILETEFKIPVRVLSMTSTPHALEAARKAQLGYSLDALYETVKNLTPFY EEECCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCEE LNVQEEKKKPLSPMKSVILTACLTGEGSALAIQKMLENYLRFDKDLIEIIPISIVHEKDL EEECHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHCHHEECHHHH TKMIENIKKERNIICIVTNFDVQVPCLTYHFQDIVNYTAIQPIQELITYEETYAKMADIL HHHHHHHHHCCCEEEEEECCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQQMQRNDGALLIKTIRYALNTIQELISLQLTPDSLMGVILHMSCMVDRLQKGESLLPHP HHHHHCCCCCCHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCC DKEKRRQDEYWMYMKVKKALQPIENTFEIQIPDDEVFYVMDFFIKNQPVKN CHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCCCCEEHHHHHHHCCCCCCC >Mature Secondary Structure MKRIDLIFNAIQEGKYTEGVTASELATLLQLDRANVSSDLNKLVKDKRLLKTNTRPVRFY CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEE IETNTLLETHSKEVTSLDTFAIENTSLKIAIEKAKASILYPPNGMHTLLLGETGVGKSMF EECCCHHHHCCCHHHHHHHEEEECCEEEEEEEECCCEEEECCCCCEEEEEECCCCCHHHH ASLMHEYAIEVEQLPKNAPFIVFNCADYANNPQLLLGQLFGIKKGAYTGASDQKGLIEKA HHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH HEGILFLDEVHRLPPEGQEMLFTFIDRGVYRRLGETENERKAQVLIITATTEEPNSFLLK HCCEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCHHHHH TFTRRIPMTVTLPPLRERTHKERFALLQLFFTNEAIRLRKEIHVSPNAMRAFVFYNCPNN HHHHHCCEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEEECCCC IGQLKTDVQIACAKAYSDFVTKKRDSVYVSSTDLPWYMKEGLFIERKSRHLYQIPNETFI CCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHCCEEEEECCCCEEECCCCEEE FTSDEGWSNHKIENEKQSSIYDYIDYKYEELQARGIEEEELELLIENDIQSFFVQYFNQM EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH SKKTSHENVFKIVDRNIVSVCERIAELAEKHLSKTFDEKVFLALSLHVQTTLQRLQAGKQ HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHCCCC IHHPQLNQIRTKYKEAFSVAMQCIQLLEDELQITMPIDEAGFLTMFFVVDPIPASQTEVK CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEECCCCCCCCCEE VLILAHGNGIATEMANVANELLGIDEVTGIDMPLHESPKDFLERVKVYMKTLQNVNGLLL EEEEECCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEE LVDMGSLAYIGDILETEFKIPVRVLSMTSTPHALEAARKAQLGYSLDALYETVKNLTPFY EEECCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCEE LNVQEEKKKPLSPMKSVILTACLTGEGSALAIQKMLENYLRFDKDLIEIIPISIVHEKDL EEECHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHCHHEECHHHH TKMIENIKKERNIICIVTNFDVQVPCLTYHFQDIVNYTAIQPIQELITYEETYAKMADIL HHHHHHHHHCCCEEEEEECCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQQMQRNDGALLIKTIRYALNTIQELISLQLTPDSLMGVILHMSCMVDRLQKGESLLPHP HHHHHCCCCCCHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCC DKEKRRQDEYWMYMKVKKALQPIENTFEIQIPDDEVFYVMDFFIKNQPVKN CHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCCCCEEHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1900939; 9141695; 9384377 [H]