| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is uup [C]
Identifier: 118480217
GI number: 118480217
Start: 4915220
End: 4915579
Strand: Direct
Name: uup [C]
Synonym: BALH_4673
Alternate gene names: 118480217
Gene position: 4915220-4915579 (Clockwise)
Preceding gene: 118480216
Following gene: 118480233
Centisome position: 93.5
GC content: 36.67
Gene sequence:
>360_bases TTGACAAACTATTTAGACTTAGCGACGCAAGAAGAATTAGAAAGCATGCTACAAGAATATCCTGGCACTATACTTTTCAT TAGCCATGACCGTGCCTTCATTCGTTCTGTTGCAGACCATATTCTACAAGTAGATGAAAGTGAACCAAGAGTATTCCACG GTAATTACGAACAATACACAAACAGAACAGCCGATGCTTCTGTAAACGTTACTGCACAAGAATTATTACGATTACAAACA AAATTAACAGAAATCATCGGCCGAATTTCCATACCAAACCATCACGATGACATCACATCTCTCGAACAAGAATACGAAAC ATTATTAGTTAAAATCCAGAAATGTAAAGAAGCACTCTAA
Upstream 100 bases:
>100_bases GGGATGCGAATGGACTAGATGAAATTCAAAATGACGCTGAGGCGCTAGCGAAGGCACAAATTTATAATAAAGAATTCAAA AATCACAAGCAGAAATAATT
Downstream 100 bases:
>100_bases TGTCTTCCCTATATATCGACGGGACCTTCCGCATTTCCCAAGAAATATTGAATCTTCGACATAGCATACAAAAAGCCGTG CAGTTCATCAGCACGGCCTT
Product: ABC transporter ATP-binding protein
Products: NA
Alternate protein names: ABC Transporter; ABC Transporter ATPase; ABC Transporter Related Protein; ABC Transporter-Related Protein; ATPase Components Of ABC Transporters; Pristinamycin Resistance Protein Vgab; Macrolide Efflux Pump; ABC Transporter ATPase Component
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MTNYLDLATQEELESMLQEYPGTILFISHDRAFIRSVADHILQVDESEPRVFHGNYEQYTNRTADASVNVTAQELLRLQT KLTEIIGRISIPNHHDDITSLEQEYETLLVKIQKCKEAL
Sequences:
>Translated_119_residues MTNYLDLATQEELESMLQEYPGTILFISHDRAFIRSVADHILQVDESEPRVFHGNYEQYTNRTADASVNVTAQELLRLQT KLTEIIGRISIPNHHDDITSLEQEYETLLVKIQKCKEAL >Mature_118_residues TNYLDLATQEELESMLQEYPGTILFISHDRAFIRSVADHILQVDESEPRVFHGNYEQYTNRTADASVNVTAQELLRLQTK LTEIIGRISIPNHHDDITSLEQEYETLLVKIQKCKEAL
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787182, Length=58, Percent_Identity=48.2758620689655, Blast_Score=64, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13748; Mature: 13616
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNYLDLATQEELESMLQEYPGTILFISHDRAFIRSVADHILQVDESEPRVFHGNYEQYT CCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEECCHHHHC NRTADASVNVTAQELLRLQTKLTEIIGRISIPNHHDDITSLEQEYETLLVKIQKCKEAL CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TNYLDLATQEELESMLQEYPGTILFISHDRAFIRSVADHILQVDESEPRVFHGNYEQYT CCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEECCHHHHC NRTADASVNVTAQELLRLQTKLTEIIGRISIPNHHDDITSLEQEYETLLVKIQKCKEAL CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Endonuclease; Excision [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA