Definition Bacillus thuringiensis str. Al Hakam chromosome, complete genome.
Accession NC_008600
Length 5,257,091

Click here to switch to the map view.

The map label for this gene is uup [C]

Identifier: 118480217

GI number: 118480217

Start: 4915220

End: 4915579

Strand: Direct

Name: uup [C]

Synonym: BALH_4673

Alternate gene names: 118480217

Gene position: 4915220-4915579 (Clockwise)

Preceding gene: 118480216

Following gene: 118480233

Centisome position: 93.5

GC content: 36.67

Gene sequence:

>360_bases
TTGACAAACTATTTAGACTTAGCGACGCAAGAAGAATTAGAAAGCATGCTACAAGAATATCCTGGCACTATACTTTTCAT
TAGCCATGACCGTGCCTTCATTCGTTCTGTTGCAGACCATATTCTACAAGTAGATGAAAGTGAACCAAGAGTATTCCACG
GTAATTACGAACAATACACAAACAGAACAGCCGATGCTTCTGTAAACGTTACTGCACAAGAATTATTACGATTACAAACA
AAATTAACAGAAATCATCGGCCGAATTTCCATACCAAACCATCACGATGACATCACATCTCTCGAACAAGAATACGAAAC
ATTATTAGTTAAAATCCAGAAATGTAAAGAAGCACTCTAA

Upstream 100 bases:

>100_bases
GGGATGCGAATGGACTAGATGAAATTCAAAATGACGCTGAGGCGCTAGCGAAGGCACAAATTTATAATAAAGAATTCAAA
AATCACAAGCAGAAATAATT

Downstream 100 bases:

>100_bases
TGTCTTCCCTATATATCGACGGGACCTTCCGCATTTCCCAAGAAATATTGAATCTTCGACATAGCATACAAAAAGCCGTG
CAGTTCATCAGCACGGCCTT

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: ABC Transporter; ABC Transporter ATPase; ABC Transporter Related Protein; ABC Transporter-Related Protein; ATPase Components Of ABC Transporters; Pristinamycin Resistance Protein Vgab; Macrolide Efflux Pump; ABC Transporter ATPase Component

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MTNYLDLATQEELESMLQEYPGTILFISHDRAFIRSVADHILQVDESEPRVFHGNYEQYTNRTADASVNVTAQELLRLQT
KLTEIIGRISIPNHHDDITSLEQEYETLLVKIQKCKEAL

Sequences:

>Translated_119_residues
MTNYLDLATQEELESMLQEYPGTILFISHDRAFIRSVADHILQVDESEPRVFHGNYEQYTNRTADASVNVTAQELLRLQT
KLTEIIGRISIPNHHDDITSLEQEYETLLVKIQKCKEAL
>Mature_118_residues
TNYLDLATQEELESMLQEYPGTILFISHDRAFIRSVADHILQVDESEPRVFHGNYEQYTNRTADASVNVTAQELLRLQTK
LTEIIGRISIPNHHDDITSLEQEYETLLVKIQKCKEAL

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787182, Length=58, Percent_Identity=48.2758620689655, Blast_Score=64, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13748; Mature: 13616

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNYLDLATQEELESMLQEYPGTILFISHDRAFIRSVADHILQVDESEPRVFHGNYEQYT
CCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEECCHHHHC
NRTADASVNVTAQELLRLQTKLTEIIGRISIPNHHDDITSLEQEYETLLVKIQKCKEAL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TNYLDLATQEELESMLQEYPGTILFISHDRAFIRSVADHILQVDESEPRVFHGNYEQYT
CCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEECCHHHHC
NRTADASVNVTAQELLRLQTKLTEIIGRISIPNHHDDITSLEQEYETLLVKIQKCKEAL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Endonuclease; Excision [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA