Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
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Accession | NC_008600 |
Length | 5,257,091 |
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The map label for this gene is glnT [H]
Identifier: 118480132
GI number: 118480132
Start: 4821506
End: 4822948
Strand: Direct
Name: glnT [H]
Synonym: BALH_4583
Alternate gene names: 118480132
Gene position: 4821506-4822948 (Clockwise)
Preceding gene: 118480126
Following gene: 118480133
Centisome position: 91.71
GC content: 37.98
Gene sequence:
>1443_bases GTGTATTATATGGTTAATATCTTTAGCAGATTCCTTGAGGTAACGAATAATATTTTATGGTCATATATTCTTATTGCAAT GCTAATCGGCTTCGGTCTTTATTTCTCTTTTAAATTGAAGTTTGTCCAAATTACTCATTTCGGTGAGATGGTCGGTTTAA TTAGTAAAGGATTTAATCGAAAAGAAAAAAAGAAAGATAGCATCTCCCCGTTCCAAGCATTTTGCTTAAGTGCAGCTGCA CGTATCGGTATCGGAAACTTAGCTGGTGTAGCTTTAGCTATTTCAATGGGCGGACCTGGCGCAGTATTTTGGATGTGGTT TATCGCTATCCTTGGAGCAGCTACTAGTTTCGTAGAATGTACGCTCGCGCAAATTTATAAAGTAAAAGATGGAAGCAGAT TCCGTGGTGGCCCAGCATATTATATGGAAAAAGGATTAAACAAACGCTGGATGGGTGTTTGGTTCTCACTTCTTATTACA GTTGCGTACGGATTAATTTTCAACTCTGTACAAGCAAACACAGTAACAATAGCATTTGAAAATGCTTTTGGACTAGAGCG AACGATCGTAGGAGCTCTATTAGCTTTATTAGTTGCAGTTATTATTTTCGGTGGTATTAAGAGCATTTCACGTATTACGG AAATGATTGTTCCTCCAATGGCAATCATTTATATTGGTGTGGCTATTTTTGTTGTTATTAACAACTTTACTATGTTACCA AGCATTTTTATGGAAATATTTAATGGTGCATTCGGTTTAGACCAAGCCATCGCTGGTGGTATTGGAGCAGCAATCAAGTT CGGAATTCAGCGCGGTTTATTCGCAACAGAAGCAGGTATGGGTAGCTCTCCTAACGCTGCTGCAACATCAGATGTATCTC ACCCTGTCAAACAAGGACTTGTTCAAGCATTAGGTGTTTTCGTAGACACATTCTTAGTATGTACATCAACAGCATTTATC GTATTATGCTCTGGACTTTACAAAGGAACAAATTTACAAGGTATTGAATTAACACAAAGTGCATTAAGTTCACAAATCGG ACCATGGGCAAGCACTTTCTTAGCGATTATTATTTTCCTATTCGCGTTCAGTTCCTTACTAGGAAACTACTATTATGGTG AAACAAACATCGCATTCATTAAAGAAAGCAAAACATGGTTAATGATTTATCGCATTGCAGTTGTCGGAATGGTATTCTTC GGATCAATCGCTGCCCTTCAGACTGTTTGGAGCTTAGCTGATTTATTCATGGGACTAATGGTATTCACAAACTTAATTGC CATCTCATTCCTAAGCAAGTTCGCCTACGCAGCATTAGTAGACTATATGAAGCAAAAGAAACAAGGAAAAGATCCTGTTT TCGTTGCAAGCTCTATCCCTGGCTTACAAAATACAGAGTGCTGGGATGGACAGGATGTAGAAGAAAATAAAAAAGCTGTA TAA
Upstream 100 bases:
>100_bases TTAATCATAACATAAAATAGATTTAAGTAACATGATTTTTTAGAAAAATTGATTCTCGTATATTTTTTGCATATAATTTT CTTATTACGGAAAAAAGGAA
Downstream 100 bases:
>100_bases CAGTTAAAAGCGCTTCAAGCTCTCGACCTTGAAGCGCTTTTTTGCTTCGAGCGAGAGAGCGAAATGACCGGAGATTCTAG CCACCGGAGCTGGATATTAC
Product: sodium/alanine symporter family protein
Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 480; Mature: 480
Protein sequence:
>480_residues MYYMVNIFSRFLEVTNNILWSYILIAMLIGFGLYFSFKLKFVQITHFGEMVGLISKGFNRKEKKKDSISPFQAFCLSAAA RIGIGNLAGVALAISMGGPGAVFWMWFIAILGAATSFVECTLAQIYKVKDGSRFRGGPAYYMEKGLNKRWMGVWFSLLIT VAYGLIFNSVQANTVTIAFENAFGLERTIVGALLALLVAVIIFGGIKSISRITEMIVPPMAIIYIGVAIFVVINNFTMLP SIFMEIFNGAFGLDQAIAGGIGAAIKFGIQRGLFATEAGMGSSPNAAATSDVSHPVKQGLVQALGVFVDTFLVCTSTAFI VLCSGLYKGTNLQGIELTQSALSSQIGPWASTFLAIIIFLFAFSSLLGNYYYGETNIAFIKESKTWLMIYRIAVVGMVFF GSIAALQTVWSLADLFMGLMVFTNLIAISFLSKFAYAALVDYMKQKKQGKDPVFVASSIPGLQNTECWDGQDVEENKKAV
Sequences:
>Translated_480_residues MYYMVNIFSRFLEVTNNILWSYILIAMLIGFGLYFSFKLKFVQITHFGEMVGLISKGFNRKEKKKDSISPFQAFCLSAAA RIGIGNLAGVALAISMGGPGAVFWMWFIAILGAATSFVECTLAQIYKVKDGSRFRGGPAYYMEKGLNKRWMGVWFSLLIT VAYGLIFNSVQANTVTIAFENAFGLERTIVGALLALLVAVIIFGGIKSISRITEMIVPPMAIIYIGVAIFVVINNFTMLP SIFMEIFNGAFGLDQAIAGGIGAAIKFGIQRGLFATEAGMGSSPNAAATSDVSHPVKQGLVQALGVFVDTFLVCTSTAFI VLCSGLYKGTNLQGIELTQSALSSQIGPWASTFLAIIIFLFAFSSLLGNYYYGETNIAFIKESKTWLMIYRIAVVGMVFF GSIAALQTVWSLADLFMGLMVFTNLIAISFLSKFAYAALVDYMKQKKQGKDPVFVASSIPGLQNTECWDGQDVEENKKAV >Mature_480_residues MYYMVNIFSRFLEVTNNILWSYILIAMLIGFGLYFSFKLKFVQITHFGEMVGLISKGFNRKEKKKDSISPFQAFCLSAAA RIGIGNLAGVALAISMGGPGAVFWMWFIAILGAATSFVECTLAQIYKVKDGSRFRGGPAYYMEKGLNKRWMGVWFSLLIT VAYGLIFNSVQANTVTIAFENAFGLERTIVGALLALLVAVIIFGGIKSISRITEMIVPPMAIIYIGVAIFVVINNFTMLP SIFMEIFNGAFGLDQAIAGGIGAAIKFGIQRGLFATEAGMGSSPNAAATSDVSHPVKQGLVQALGVFVDTFLVCTSTAFI VLCSGLYKGTNLQGIELTQSALSSQIGPWASTFLAIIIFLFAFSSLLGNYYYGETNIAFIKESKTWLMIYRIAVVGMVFF GSIAALQTVWSLADLFMGLMVFTNLIAISFLSKFAYAALVDYMKQKKQGKDPVFVASSIPGLQNTECWDGQDVEENKKAV
Specific function: Probably functions as a sodium/glutamine symporter for glutamine uptake [H]
COG id: COG1115
COG function: function code E; Na+/alanine symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]
Homologues:
Organism=Escherichia coli, GI1786188, Length=485, Percent_Identity=40.8247422680412, Blast_Score=340, Evalue=2e-94,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001463 [H]
Pfam domain/function: PF01235 Na_Ala_symp [H]
EC number: NA
Molecular weight: Translated: 52302; Mature: 52302
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYYMVNIFSRFLEVTNNILWSYILIAMLIGFGLYFSFKLKFVQITHFGEMVGLISKGFNR CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHCCCC KEKKKDSISPFQAFCLSAAARIGIGNLAGVALAISMGGPGAVFWMWFIAILGAATSFVEC HHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHH TLAQIYKVKDGSRFRGGPAYYMEKGLNKRWMGVWFSLLITVAYGLIFNSVQANTVTIAFE HHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC NAFGLERTIVGALLALLVAVIIFGGIKSISRITEMIVPPMAIIYIGVAIFVVINNFTMLP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCHHHHH SIFMEIFNGAFGLDQAIAGGIGAAIKFGIQRGLFATEAGMGSSPNAAATSDVSHPVKQGL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHH VQALGVFVDTFLVCTSTAFIVLCSGLYKGTNLQGIELTQSALSSQIGPWASTFLAIIIFL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH FAFSSLLGNYYYGETNIAFIKESKTWLMIYRIAVVGMVFFGSIAALQTVWSLADLFMGLM HHHHHHHCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFTNLIAISFLSKFAYAALVDYMKQKKQGKDPVFVASSIPGLQNTECWDGQDVEENKKAV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MYYMVNIFSRFLEVTNNILWSYILIAMLIGFGLYFSFKLKFVQITHFGEMVGLISKGFNR CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHCCCC KEKKKDSISPFQAFCLSAAARIGIGNLAGVALAISMGGPGAVFWMWFIAILGAATSFVEC HHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHH TLAQIYKVKDGSRFRGGPAYYMEKGLNKRWMGVWFSLLITVAYGLIFNSVQANTVTIAFE HHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC NAFGLERTIVGALLALLVAVIIFGGIKSISRITEMIVPPMAIIYIGVAIFVVINNFTMLP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCHHHHH SIFMEIFNGAFGLDQAIAGGIGAAIKFGIQRGLFATEAGMGSSPNAAATSDVSHPVKQGL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHH VQALGVFVDTFLVCTSTAFIVLCSGLYKGTNLQGIELTQSALSSQIGPWASTFLAIIIFL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH FAFSSLLGNYYYGETNIAFIKESKTWLMIYRIAVVGMVFFGSIAALQTVWSLADLFMGLM HHHHHHHCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFTNLIAISFLSKFAYAALVDYMKQKKQGKDPVFVASSIPGLQNTECWDGQDVEENKKAV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]
Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]