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The map label for this gene is ltrC [H]

Identifier: 118480039

GI number: 118480039

Start: 4728254

End: 4728754

Strand: Direct

Name: ltrC [H]

Synonym: BALH_4486

Alternate gene names: 118480039

Gene position: 4728254-4728754 (Clockwise)

Preceding gene: 118480037

Following gene: 118480043

Centisome position: 89.94

GC content: 36.13

Gene sequence:

>501_bases
GTGATAAACATGAAAGAATCAAATCAACTACAAGAAAGAGCATTACAACTATTACAAGAACGTGGTGTAACAATTGACGA
TATTGCTGAGCTTGTTCATTTTCTGCAAAAAAAATATCATCCAAATTTAGAAATGTCAGAATGCCGTTATAACGTTGAGC
GTGTATTATCAAAACGTGAAGTACAAAATGCATTGATTACAGGTATCGAACTCGATGTCCTTACTGAAAAAGGAATGTTA
AGTCAACCATTACAAGATATCGTAAAACGTGATGAAGGCTTATACGGAATTGATGAAGTAATCGCACTTTCTATCGTTAA
TGTGTACGGCTCTATCGGTTTCACGAACTTTGGATATATCGATAAATTAAAACCTGGTATTTTAGAATACTTAAATGATA
AATCGTCTGGAAAAGTGCATACATTTCTTGATGATATCGTTGGCGGAATCGCTGCCGCTGCTTCAAGCCGTTTAGCGCAT
AGAGCTGAGCATTCGGAGTGA

Upstream 100 bases:

>100_bases
CCTATGGTTTTTCTTTATATATATGAGCTTGTGCTCGCCTTTCATTCCTATGCACATGATAAAGCAACGAAACGTATACA
AATACTAAAAAGAAAAAAAG

Downstream 100 bases:

>100_bases
AATATGAAAGACCGTCAGTGTCATACTGACGGTCTTTTGTATTCCATGAGCATAAATTCTCTTCCTCGGCTCAAAAAAAT
AGGCCCTTGCTGAAAACCTA

Product: low temperature requirement C protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MINMKESNQLQERALQLLQERGVTIDDIAELVHFLQKKYHPNLEMSECRYNVERVLSKREVQNALITGIELDVLTEKGML
SQPLQDIVKRDEGLYGIDEVIALSIVNVYGSIGFTNFGYIDKLKPGILEYLNDKSSGKVHTFLDDIVGGIAAAASSRLAH
RAEHSE

Sequences:

>Translated_166_residues
MINMKESNQLQERALQLLQERGVTIDDIAELVHFLQKKYHPNLEMSECRYNVERVLSKREVQNALITGIELDVLTEKGML
SQPLQDIVKRDEGLYGIDEVIALSIVNVYGSIGFTNFGYIDKLKPGILEYLNDKSSGKVHTFLDDIVGGIAAAASSRLAH
RAEHSE
>Mature_166_residues
MINMKESNQLQERALQLLQERGVTIDDIAELVHFLQKKYHPNLEMSECRYNVERVLSKREVQNALITGIELDVLTEKGML
SQPLQDIVKRDEGLYGIDEVIALSIVNVYGSIGFTNFGYIDKLKPGILEYLNDKSSGKVHTFLDDIVGGIAAAASSRLAH
RAEHSE

Specific function: Unknown

COG id: COG1267

COG function: function code I; Phosphatidylglycerophosphatase A and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ypjQ [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007686 [H]

Pfam domain/function: PF04608 PgpA [H]

EC number: NA

Molecular weight: Translated: 18644; Mature: 18644

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINMKESNQLQERALQLLQERGVTIDDIAELVHFLQKKYHPNLEMSECRYNVERVLSKRE
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
VQNALITGIELDVLTEKGMLSQPLQDIVKRDEGLYGIDEVIALSIVNVYGSIGFTNFGYI
HHHHHHHCCHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCH
DKLKPGILEYLNDKSSGKVHTFLDDIVGGIAAAASSRLAHRAEHSE
HHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MINMKESNQLQERALQLLQERGVTIDDIAELVHFLQKKYHPNLEMSECRYNVERVLSKRE
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
VQNALITGIELDVLTEKGMLSQPLQDIVKRDEGLYGIDEVIALSIVNVYGSIGFTNFGYI
HHHHHHHCCHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCH
DKLKPGILEYLNDKSSGKVHTFLDDIVGGIAAAASSRLAHRAEHSE
HHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]