Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
---|---|
Accession | NC_008600 |
Length | 5,257,091 |
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The map label for this gene is thiT [H]
Identifier: 118479938
GI number: 118479938
Start: 4600995
End: 4601765
Strand: Direct
Name: thiT [H]
Synonym: BALH_4383
Alternate gene names: 118479938
Gene position: 4600995-4601765 (Clockwise)
Preceding gene: 118479936
Following gene: 118479944
Centisome position: 87.52
GC content: 37.74
Gene sequence:
>771_bases GTGCAAACGTCCGAAATACATACCTCTTTTTTATTTACGTATTTCGTATCCTCCTATGATATCTATTCTTTTTTGTACAA CTTGGATTTAGGGGGAGACAACATGCGTAACACCAATTTACAAGCGATGATCGAATCTGCTATTCTTGCAGCCTTCGCCA TGGTCATCGACATTTTACCATTATCAATTAGCCTTCCAACAGGCGGTTCCATTTCATTTGCTATGATTCCTATTTTTATT ATCGCATACCGCTGGGGCTTCAAAATGGCTTTCTTAGGAGGCTTAATTTGGGGATTATTACAAATTGTCGTAGGCGATGC CATTATCGTCACGCCACTTCAAGTACTCATTGAATACTTCGTTGCTTTCGCATTCATTGGATTTGCTGGTTTATTCTATC GTCCAATTCAAAAAGCACTTTTAACGTCCAATGAAAATAACTTAGAACAATCCAATTTAGGTAGTCGCAAAGACAAACCT GCTTCCAAACAAAACGAAGGAAAGAAAGTCCTTGCTTATATTATCCTTGCTACATTTATCGGTAGCTTTGCTCGCTACTT CTGTCACTTTATTGCCGGTATTATTTTCTGGGGACAATATGCACCGAAAGGTCAATCAGCTGTGCTTTATTCATTAATCG TAAACGGCAGTACAATGCTCGGCTCTTTTATTTTATGTACCGTTTTACTTATATTTTTATTCCTTACTTCACCACGCTTA TTCAAGAGCATCAATGCTTATCAAATAAATGCAAACAAAAAGGGCGCTTAA
Upstream 100 bases:
>100_bases CAAATAAAGAATTTCGTTATCACAGGGGGAGCCATGCCGCTGAGAGGGAACACTTCGTTCCGACCCTTCGAACCTGTTAG TTAATGCTAACGCAGGGATT
Downstream 100 bases:
>100_bases TAAGCGCTCTTTTTTTCATATCGTAATATCAATTAAAAATACAATAAATACGCAAAAGAAAATAAATACCATTATACTTA GCCAATTGCTATGCACGGTT
Product: thiamine transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MQTSEIHTSFLFTYFVSSYDIYSFLYNLDLGGDNMRNTNLQAMIESAILAAFAMVIDILPLSISLPTGGSISFAMIPIFI IAYRWGFKMAFLGGLIWGLLQIVVGDAIIVTPLQVLIEYFVAFAFIGFAGLFYRPIQKALLTSNENNLEQSNLGSRKDKP ASKQNEGKKVLAYIILATFIGSFARYFCHFIAGIIFWGQYAPKGQSAVLYSLIVNGSTMLGSFILCTVLLIFLFLTSPRL FKSINAYQINANKKGA
Sequences:
>Translated_256_residues MQTSEIHTSFLFTYFVSSYDIYSFLYNLDLGGDNMRNTNLQAMIESAILAAFAMVIDILPLSISLPTGGSISFAMIPIFI IAYRWGFKMAFLGGLIWGLLQIVVGDAIIVTPLQVLIEYFVAFAFIGFAGLFYRPIQKALLTSNENNLEQSNLGSRKDKP ASKQNEGKKVLAYIILATFIGSFARYFCHFIAGIIFWGQYAPKGQSAVLYSLIVNGSTMLGSFILCTVLLIFLFLTSPRL FKSINAYQINANKKGA >Mature_256_residues MQTSEIHTSFLFTYFVSSYDIYSFLYNLDLGGDNMRNTNLQAMIESAILAAFAMVIDILPLSISLPTGGSISFAMIPIFI IAYRWGFKMAFLGGLIWGLLQIVVGDAIIVTPLQVLIEYFVAFAFIGFAGLFYRPIQKALLTSNENNLEQSNLGSRKDKP ASKQNEGKKVLAYIILATFIGSFARYFCHFIAGIIFWGQYAPKGQSAVLYSLIVNGSTMLGSFILCTVLLIFLFLTSPRL FKSINAYQINANKKGA
Specific function: Probable proton-coupled thiamine transporter [H]
COG id: COG3859
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the proton-coupled thiamine transporter family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012651 [H]
Pfam domain/function: PF09515 Thia_YuaJ [H]
EC number: NA
Molecular weight: Translated: 28383; Mature: 28383
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTSEIHTSFLFTYFVSSYDIYSFLYNLDLGGDNMRNTNLQAMIESAILAAFAMVIDILP CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LSISLPTGGSISFAMIPIFIIAYRWGFKMAFLGGLIWGLLQIVVGDAIIVTPLQVLIEYF HEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH VAFAFIGFAGLFYRPIQKALLTSNENNLEQSNLGSRKDKPASKQNEGKKVLAYIILATFI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH GSFARYFCHFIAGIIFWGQYAPKGQSAVLYSLIVNGSTMLGSFILCTVLLIFLFLTSPRL HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHH FKSINAYQINANKKGA HHCCCCEEECCCCCCC >Mature Secondary Structure MQTSEIHTSFLFTYFVSSYDIYSFLYNLDLGGDNMRNTNLQAMIESAILAAFAMVIDILP CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LSISLPTGGSISFAMIPIFIIAYRWGFKMAFLGGLIWGLLQIVVGDAIIVTPLQVLIEYF HEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH VAFAFIGFAGLFYRPIQKALLTSNENNLEQSNLGSRKDKPASKQNEGKKVLAYIILATFI HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH GSFARYFCHFIAGIIFWGQYAPKGQSAVLYSLIVNGSTMLGSFILCTVLLIFLFLTSPRL HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHH FKSINAYQINANKKGA HHCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]