| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is ydeO [H]
Identifier: 118479924
GI number: 118479924
Start: 4588543
End: 4589433
Strand: Direct
Name: ydeO [H]
Synonym: BALH_4368
Alternate gene names: 118479924
Gene position: 4588543-4589433 (Clockwise)
Preceding gene: 118479923
Following gene: 118479929
Centisome position: 87.28
GC content: 34.79
Gene sequence:
>891_bases TTGAAACGAGGAAATTATATGGAGAAAATTATCAAAAACAAGCCCAATAAGCTAAAAATCGCTTCAAAAGCTTTGATGAT TATTATTGGGGCATTTATCACAGCGTACGGATTAGAAGCAGTATTAATTCCAAATAACGTATCAGACGGTGGTGTAACTG GTTTGAGTATCGTTAGTTCAAGATTATTTGGATTGCCATTAGGAGCTCTAATCGCAATTATTAACATTCCTTTCGTTTGG TTAGGATATAAGCAAATCGGTAAAAGCTTTGCAATTTATTCTATTATTGGGATTGCTTCATTAGCAATAGGTACCGTTGT CATGCACGGAATACCAGCTATTATTGAAGGCGATACATTATTAGTTACAGTTGTTGGTGGTATCATTATCGGTTTTGGTA TGGGACTAGCATTACGTAACGGCGGGGCATTAGATGGAATCGATATGCTAGCTGTATTACTTTCTCGCAAGTTACCATTT GGAACGAGTGACCTTATTTTATTCTTAAACATGTTCGTATTTATTTTCGTATCAACAGTATTCGGTCTTCAAGGAGCTAT CCTTTCGGCAATTGCTTACTTTATTGCTTCGAAAGTGATTCATATCGTTGAAGTTGGTTTAAGTGGTTCGAAAGCATTTA AAATTATTACAAAAGAACCTGAATTAATGGTAGAAACAATTCGTGATCGTTTAGGCCGAAGTGCAACATATAACGAAGTG TACGGTGGTTATTCAAGAGAGAAATTCAAAGAAATTTCTTGTGTAATTAACCGTTTAGAAGAAAGTAAAATGAAAGAACT TATTAATGAAATCGATCCACACGCCTTTATTACAGTTTATGACGTAGCAGAAGTAAAAGGCGGTAACTTTAAGAAACGTG ATATTCATTAA
Upstream 100 bases:
>100_bases GTGATAATATTCCCTGCATACATCCTTTAAAGAGAATTTTTTCAAATAAAATGTTAAAATGGAAATTAGGTGTGAATTAC GTAACAAATAAGAAACTAGT
Downstream 100 bases:
>100_bases TCGTTATGAAAAACGAGGGTGTGCTAATATGTTGGCACACCCTCTTCTTATTATGAAGTTTTTGTCGGTAAGTCGATATA TTTCAATAATCACTGATATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MKRGNYMEKIIKNKPNKLKIASKALMIIIGAFITAYGLEAVLIPNNVSDGGVTGLSIVSSRLFGLPLGALIAIINIPFVW LGYKQIGKSFAIYSIIGIASLAIGTVVMHGIPAIIEGDTLLVTVVGGIIIGFGMGLALRNGGALDGIDMLAVLLSRKLPF GTSDLILFLNMFVFIFVSTVFGLQGAILSAIAYFIASKVIHIVEVGLSGSKAFKIITKEPELMVETIRDRLGRSATYNEV YGGYSREKFKEISCVINRLEESKMKELINEIDPHAFITVYDVAEVKGGNFKKRDIH
Sequences:
>Translated_296_residues MKRGNYMEKIIKNKPNKLKIASKALMIIIGAFITAYGLEAVLIPNNVSDGGVTGLSIVSSRLFGLPLGALIAIINIPFVW LGYKQIGKSFAIYSIIGIASLAIGTVVMHGIPAIIEGDTLLVTVVGGIIIGFGMGLALRNGGALDGIDMLAVLLSRKLPF GTSDLILFLNMFVFIFVSTVFGLQGAILSAIAYFIASKVIHIVEVGLSGSKAFKIITKEPELMVETIRDRLGRSATYNEV YGGYSREKFKEISCVINRLEESKMKELINEIDPHAFITVYDVAEVKGGNFKKRDIH >Mature_296_residues MKRGNYMEKIIKNKPNKLKIASKALMIIIGAFITAYGLEAVLIPNNVSDGGVTGLSIVSSRLFGLPLGALIAIINIPFVW LGYKQIGKSFAIYSIIGIASLAIGTVVMHGIPAIIEGDTLLVTVVGGIIIGFGMGLALRNGGALDGIDMLAVLLSRKLPF GTSDLILFLNMFVFIFVSTVFGLQGAILSAIAYFIASKVIHIVEVGLSGSKAFKIITKEPELMVETIRDRLGRSATYNEV YGGYSREKFKEISCVINRLEESKMKELINEIDPHAFITVYDVAEVKGGNFKKRDIH
Specific function: Unknown
COG id: COG1284
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0750 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003740 - InterPro: IPR019264 [H]
Pfam domain/function: PF02588 DUF161; PF10035 DUF2179 [H]
EC number: NA
Molecular weight: Translated: 32073; Mature: 32073
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRGNYMEKIIKNKPNKLKIASKALMIIIGAFITAYGLEAVLIPNNVSDGGVTGLSIVSS CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHH RLFGLPLGALIAIINIPFVWLGYKQIGKSFAIYSIIGIASLAIGTVVMHGIPAIIEGDTL HHHCCCHHHHHHHHHCCHHEECHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCH LVTVVGGIIIGFGMGLALRNGGALDGIDMLAVLLSRKLPFGTSDLILFLNMFVFIFVSTV HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH FGLQGAILSAIAYFIASKVIHIVEVGLSGSKAFKIITKEPELMVETIRDRLGRSATYNEV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCHHHH YGGYSREKFKEISCVINRLEESKMKELINEIDPHAFITVYDVAEVKGGNFKKRDIH HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCCCCCCC >Mature Secondary Structure MKRGNYMEKIIKNKPNKLKIASKALMIIIGAFITAYGLEAVLIPNNVSDGGVTGLSIVSS CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHH RLFGLPLGALIAIINIPFVWLGYKQIGKSFAIYSIIGIASLAIGTVVMHGIPAIIEGDTL HHHCCCHHHHHHHHHCCHHEECHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCH LVTVVGGIIIGFGMGLALRNGGALDGIDMLAVLLSRKLPFGTSDLILFLNMFVFIFVSTV HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH FGLQGAILSAIAYFIASKVIHIVEVGLSGSKAFKIITKEPELMVETIRDRLGRSATYNEV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCHHHH YGGYSREKFKEISCVINRLEESKMKELINEIDPHAFITVYDVAEVKGGNFKKRDIH HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]