| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
Click here to switch to the map view.
The map label for this gene is pckA [H]
Identifier: 118479897
GI number: 118479897
Start: 4559232
End: 4560818
Strand: Direct
Name: pckA [H]
Synonym: BALH_4341
Alternate gene names: 118479897
Gene position: 4559232-4560818 (Clockwise)
Preceding gene: 118479893
Following gene: 118479902
Centisome position: 86.73
GC content: 38.44
Gene sequence:
>1587_bases ATGAGTACTGTGAATGTCCAAATTGGTTTACACGAATTATTGAACGGAAGCAATGCACAGATTCAACTAAGTGTTCCGCA ATTAGTGGAAAAAGTATTAATGCGAAATGAAGGGAAATTAACTTCGACTGGTGCCGTTTCTGCTTCAACTGGAAAATATA CAGGACGTTCTCCTAAAGATAAATTTATTGTGAAAGAAGCATCGGTTGCTGACAAAATTGCTTGGGGAGCTGTGAATCAA CCGATTTCTGAAGAACATTTTAATAAATTATATACTAAAGTTTTAGAATACTTAAAAGAAAAAGAAGAGTTATTCGTCTT CAAAGGATTTGCAGGCGCGGACCGCAATTACCGTCTACCAATCCAAGTTATTAATGAATATGCATGGCACAATTTATTTG TACATCAATTATTCATTCGTCCAACTGAAGAAGAATTAACGACTCATGAATCAGAATTCACAATTGTTTCTGCACCGAAT TTCAAAGCTGATCCAGCTGTTGACGGTACAAACTCTGAAGCATTCATTATGGTTTCATTCGAAAAACGTATCGTACTAAT TGGTGGTACAGAATACGCTGGAGAAATGAAAAAATCAATCTTCTCTATTATGAACTTCTTACTACCTGAACAAGATATTC TTTCTATGCATTGCTCTGCAAACGTAGGTGAAGAAGGCGACGTAGCACTATTCTTCGGTTTATCTGGAACAGGTAAAACA ACATTATCTGCTGATCCAAACCGTAAATTAATCGGTGATGATGAGCATGGTTGGTCTGATAACGGTGTATTCAATATTGA AGGCGGTTGCTACGCAAAATGTGTAAACCTTTCTCACGAGAAAGAACCACAAATTTTCGATGCAATCACATTTGGATCTG TTTTAGAAAACGTTATCATTAATGACCAAACGCGTATCGCAGACTATAACGATACTACTTTAACAGAAAATACTCGTGCT GCATACCCTATGCATGCGATCGACAATATCGTATTGCCAAGTGTTGCTGGACATCCAAATACAATTATTTTCTTAACTGC TGATGCATCTGGCGTATTGCCTCCAATCAGTAAGTTATCAAAAGAACAAGCTATGTATCATTTCTTAAGTGGTTACACTA GTAAACTAGCAGGAACAGAGCGCGGCGTTACATCACCGCAAGCAACATTCTCAACTTGCTTCGGTTCACCATTCTTACCA CTTGATGCATCTCGCTATGCTGAAATGCTTGGTGAAAAAATCGAGAAACACGATGCAAAAGTATTCTTAGTAAACACTGG CTGGACTGGTGGCGAATACGGCGTTGGTAAACGTATGAACTTAGGTTACACTCGTGCAATGATTCAAGCAGCATTAAACG GTGAACTTGCGAAAACTGAAACAGCTAAACATGACATCTTCGGTCTTGAAGTTCCACTTCACGTACCAGGTGTACCTGAC GAAGTGTTAATGCCTGAACAAACTTGGGCTGATAAAGCTGCTTACAAAGCAAAAGCAATCGAACTTGCAAATGAATTCAA AGCTAACTTCAAAAAGTTCGACAGCGTATCTGAAGACATTATTAACTTAGGCGGTCCAATCGCTTAA
Upstream 100 bases:
>100_bases AAAAAGAAATAAATAGTATACATTATTTATATAATTGTGTTATACTCTTGTTGGGGATTACGAGAAATATTTCATTAAAT GAAAAGGATGGTATATAAAT
Downstream 100 bases:
>100_bases GTGCAAACTTTCTGTTGGAATAACCCTTTACTCATATGAATAAGTGTCGTGTAACCGTAAAGTTTCGCGTACTCACCGAC AAAACCCAATGCGGCTTAAC
Product: phosphoenolpyruvate carboxykinase
Products: NA
Alternate protein names: PEP carboxykinase; PEPCK; Phosphoenolpyruvate carboxylase [H]
Number of amino acids: Translated: 528; Mature: 527
Protein sequence:
>528_residues MSTVNVQIGLHELLNGSNAQIQLSVPQLVEKVLMRNEGKLTSTGAVSASTGKYTGRSPKDKFIVKEASVADKIAWGAVNQ PISEEHFNKLYTKVLEYLKEKEELFVFKGFAGADRNYRLPIQVINEYAWHNLFVHQLFIRPTEEELTTHESEFTIVSAPN FKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKT TLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSVLENVIINDQTRIADYNDTTLTENTRA AYPMHAIDNIVLPSVAGHPNTIIFLTADASGVLPPISKLSKEQAMYHFLSGYTSKLAGTERGVTSPQATFSTCFGSPFLP LDASRYAEMLGEKIEKHDAKVFLVNTGWTGGEYGVGKRMNLGYTRAMIQAALNGELAKTETAKHDIFGLEVPLHVPGVPD EVLMPEQTWADKAAYKAKAIELANEFKANFKKFDSVSEDIINLGGPIA
Sequences:
>Translated_528_residues MSTVNVQIGLHELLNGSNAQIQLSVPQLVEKVLMRNEGKLTSTGAVSASTGKYTGRSPKDKFIVKEASVADKIAWGAVNQ PISEEHFNKLYTKVLEYLKEKEELFVFKGFAGADRNYRLPIQVINEYAWHNLFVHQLFIRPTEEELTTHESEFTIVSAPN FKADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKT TLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSVLENVIINDQTRIADYNDTTLTENTRA AYPMHAIDNIVLPSVAGHPNTIIFLTADASGVLPPISKLSKEQAMYHFLSGYTSKLAGTERGVTSPQATFSTCFGSPFLP LDASRYAEMLGEKIEKHDAKVFLVNTGWTGGEYGVGKRMNLGYTRAMIQAALNGELAKTETAKHDIFGLEVPLHVPGVPD EVLMPEQTWADKAAYKAKAIELANEFKANFKKFDSVSEDIINLGGPIA >Mature_527_residues STVNVQIGLHELLNGSNAQIQLSVPQLVEKVLMRNEGKLTSTGAVSASTGKYTGRSPKDKFIVKEASVADKIAWGAVNQP ISEEHFNKLYTKVLEYLKEKEELFVFKGFAGADRNYRLPIQVINEYAWHNLFVHQLFIRPTEEELTTHESEFTIVSAPNF KADPAVDGTNSEAFIMVSFEKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKTT LSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSVLENVIINDQTRIADYNDTTLTENTRAA YPMHAIDNIVLPSVAGHPNTIIFLTADASGVLPPISKLSKEQAMYHFLSGYTSKLAGTERGVTSPQATFSTCFGSPFLPL DASRYAEMLGEKIEKHDAKVFLVNTGWTGGEYGVGKRMNLGYTRAMIQAALNGELAKTETAKHDIFGLEVPLHVPGVPDE VLMPEQTWADKAAYKAKAIELANEFKANFKKFDSVSEDIINLGGPIA
Specific function: Rate-limiting gluconeogenic enzyme. [C]
COG id: COG1866
COG function: function code C; Phosphoenolpyruvate carboxykinase (ATP)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoenolpyruvate carboxykinase [ATP] family [H]
Homologues:
Organism=Escherichia coli, GI1789807, Length=489, Percent_Identity=50.1022494887526, Blast_Score=476, Evalue=1e-135, Organism=Saccharomyces cerevisiae, GI6322950, Length=504, Percent_Identity=51.1904761904762, Blast_Score=514, Evalue=1e-146,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001272 - InterPro: IPR013035 - InterPro: IPR008210 - InterPro: IPR015994 [H]
Pfam domain/function: PF01293 PEPCK_ATP [H]
EC number: =4.1.1.49 [H]
Molecular weight: Translated: 57952; Mature: 57821
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: PS00532 PEPCK_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVNVQIGLHELLNGSNAQIQLSVPQLVEKVLMRNEGKLTSTGAVSASTGKYTGRSPKD CCEEEEEEEHHHHHCCCCCEEEEEHHHHHHHHHHCCCCCEEECCCEECCCCCCCCCCCCC KFIVKEASVADKIAWGAVNQPISEEHFNKLYTKVLEYLKEKEELFVFKGFAGADRNYRLP CEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCH IQVINEYAWHNLFVHQLFIRPTEEELTTHESEFTIVSAPNFKADPAVDGTNSEAFIMVSF HHHHHHHHHHHHEEEHHEECCCHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEE EKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKT CCEEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHEECCCCCCCCCCEEEEEEECCCCCE TLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSVLENVII EECCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHC NDQTRIADYNDTTLTENTRAAYPMHAIDNIVLPSVAGHPNTIIFLTADASGVLPPISKLS CCCCEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHH KEQAMYHFLSGYTSKLAGTERGVTSPQATFSTCFGSPFLPLDASRYAEMLGEKIEKHDAK HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCE VFLVNTGWTGGEYGVGKRMNLGYTRAMIQAALNGELAKTETAKHDIFGLEVPLHVPGVPD EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCCCEEEEEEEEECCCCCH EVLMPEQTWADKAAYKAKAIELANEFKANFKKFDSVSEDIINLGGPIA HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure STVNVQIGLHELLNGSNAQIQLSVPQLVEKVLMRNEGKLTSTGAVSASTGKYTGRSPKD CEEEEEEEHHHHHCCCCCEEEEEHHHHHHHHHHCCCCCEEECCCEECCCCCCCCCCCCC KFIVKEASVADKIAWGAVNQPISEEHFNKLYTKVLEYLKEKEELFVFKGFAGADRNYRLP CEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCH IQVINEYAWHNLFVHQLFIRPTEEELTTHESEFTIVSAPNFKADPAVDGTNSEAFIMVSF HHHHHHHHHHHHEEEHHEECCCHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEE EKRIVLIGGTEYAGEMKKSIFSIMNFLLPEQDILSMHCSANVGEEGDVALFFGLSGTGKT CCEEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHEECCCCCCCCCCEEEEEEECCCCCE TLSADPNRKLIGDDEHGWSDNGVFNIEGGCYAKCVNLSHEKEPQIFDAITFGSVLENVII EECCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHC NDQTRIADYNDTTLTENTRAAYPMHAIDNIVLPSVAGHPNTIIFLTADASGVLPPISKLS CCCCEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHH KEQAMYHFLSGYTSKLAGTERGVTSPQATFSTCFGSPFLPLDASRYAEMLGEKIEKHDAK HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCE VFLVNTGWTGGEYGVGKRMNLGYTRAMIQAALNGELAKTETAKHDIFGLEVPLHVPGVPD EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCCCCCEEEEEEEEECCCCCH EVLMPEQTWADKAAYKAKAIELANEFKANFKKFDSVSEDIINLGGPIA HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA