Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
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Accession | NC_008600 |
Length | 5,257,091 |
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The map label for this gene is ytgP [H]
Identifier: 118479843
GI number: 118479843
Start: 4504539
End: 4506191
Strand: Reverse
Name: ytgP [H]
Synonym: BALH_4281
Alternate gene names: 118479843
Gene position: 4506191-4504539 (Counterclockwise)
Preceding gene: 118479846
Following gene: 118479842
Centisome position: 85.72
GC content: 38.29
Gene sequence:
>1653_bases ATGTCCGATTCGAAATTTCTGCGCGGAACGCTCATCGTTACGTTAGGGACATTTTTAGTGAAGTTCTTAGGCATGATTTA CGTCTTTCCGTTTCATGCATTAGTAGGGACAGAAGGCGGAACGCTCTATACATATGGATACATTCCATATACGATCTTTT TAAGTATTGCAACGGCAGGGGTGCCGCTTGCTGTTTCAAAATTCGTTTCCAAATATAATGCGCTTGGCGATTATAAAACG AGCCGGAGAATGTTCCGCTCGGGAATGGTTATGATGATAGTAACAGGAGTTCTTTCATTCCTAGTACTGTACATGACGGC GCCGTTGTTTGCAGAAGCAATGCTTGGTAAACAGAGTGTACACAGTAATATAGGAGAAGTTACGACGATTATTCGTCTTG TAAGTTTTGCGCTTATTGTTGTACCGGCAGCAAGTTTAATTCGTGGTTATTTCCAAGGTCACCAATCGATGGGACCAACT ACTGTTTCGCAAATTATTGAGCAAATTATTCGTATCGTCTTTTTATTAGCGGGTAGTTTTATCGTTATTAAAGTACTTGG CGGTACAGTTGCAACAGCAGTTGGGGTAGCGACATTTGCTGCATTCGTTTCAGCAGTTGGAGCACTCGGTGTATTAATTT GGTACTGGTTAAAACGTAAAAAACATTTGGATCAATATTTAATTGAACAAACTGTACCAGAATCGACAGTGAGTACTGTT CAATTATTTAAAGAATTATTTGCATATGCGATTCCTTACGTTGTAATTGGGTTAACAATTCCTTTATATCAACAAATTGA TACATTGACATTTAACTCAATTATGCAGGCGATTGGCCAAGGTGATATCGCAGAGCGAGCACTTGGTATTTTCACAATGT GGACGCATAAATTAATTATGATTCCTGTATCACTTGCAACAGCGTTTAGTTTAACGCTTGTACCAGCGATTACAAAATCA TTTACTGAAAAACAATACCGTTATTTAAAGTTACAAATTACACAAACATTCCAGGCAAATATGTTCTTAACATTGCCAGC AGTTATCGGTATTTCATCACTTGCATATCCGATTTATACTGCGTTTTACGATTCAGATCCATTAGGTGGACAAGTATTAA TGTGGTACGCACCGGTTGCGTTGTTATTTGCTTTATTTACGGTAACAGCGGCAATTCTGCAAGGTATTAACCAACAAAAG CATGCGATTATCGCACTTATAATGGGTGTTATTTTGAAATTTGTATGTAACGTAATCTTTATTCGTTATTTCGGTACAGT AGGGGCAATTCTAGCAACAGCTGTTGGTTTCTTAGCTTCTGTTTGGTACACAAATCAACAAATTAAAAAATACGCACACT ATTCATTCGGTGTTGTATATAAGAGAACATTCCAAATTGCAGTATTAACACTTGTAATGGTCGTTACGGTGAAATTATCA CAATGGATTCTGTCCTTCATGATTTCGCCTGATAGCCGAATTGGTGCTCTTATTACAGTTGCGATTTGTGCAGGTCTTGG CGGCCTTGTTTACGGATTGTTAGCAATTCGCACAGGAGTACTTGAAAGAGTATTTGGCGGAGAAGCGTTAGAGAAAATCC AGCGTAAACTTGGCAATAGATTCAAAATAAAGTTGAAATCAAAAGGGGCGTAA
Upstream 100 bases:
>100_bases ACTAAAACCTTAAGAGTTAAGGGAAGTCTAATAGTTCTCGAATGCTCGAATAGTAAATTAATTATAGTTTCACTTTATGT AGATGTAGGAGGATTTTTGT
Downstream 100 bases:
>100_bases TTACGTCCCCTTTTCTATGATAAACAAAGAAGGTGAAAAACGTGAGATTAGATAAATTATTAGCAAATATGGGATATGGT AGTAGAAAAGAAGTAAAGAA
Product: export protein for polysaccharides and teichoic acids, polysaccharide biosynthesis family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 550; Mature: 549
Protein sequence:
>550_residues MSDSKFLRGTLIVTLGTFLVKFLGMIYVFPFHALVGTEGGTLYTYGYIPYTIFLSIATAGVPLAVSKFVSKYNALGDYKT SRRMFRSGMVMMIVTGVLSFLVLYMTAPLFAEAMLGKQSVHSNIGEVTTIIRLVSFALIVVPAASLIRGYFQGHQSMGPT TVSQIIEQIIRIVFLLAGSFIVIKVLGGTVATAVGVATFAAFVSAVGALGVLIWYWLKRKKHLDQYLIEQTVPESTVSTV QLFKELFAYAIPYVVIGLTIPLYQQIDTLTFNSIMQAIGQGDIAERALGIFTMWTHKLIMIPVSLATAFSLTLVPAITKS FTEKQYRYLKLQITQTFQANMFLTLPAVIGISSLAYPIYTAFYDSDPLGGQVLMWYAPVALLFALFTVTAAILQGINQQK HAIIALIMGVILKFVCNVIFIRYFGTVGAILATAVGFLASVWYTNQQIKKYAHYSFGVVYKRTFQIAVLTLVMVVTVKLS QWILSFMISPDSRIGALITVAICAGLGGLVYGLLAIRTGVLERVFGGEALEKIQRKLGNRFKIKLKSKGA
Sequences:
>Translated_550_residues MSDSKFLRGTLIVTLGTFLVKFLGMIYVFPFHALVGTEGGTLYTYGYIPYTIFLSIATAGVPLAVSKFVSKYNALGDYKT SRRMFRSGMVMMIVTGVLSFLVLYMTAPLFAEAMLGKQSVHSNIGEVTTIIRLVSFALIVVPAASLIRGYFQGHQSMGPT TVSQIIEQIIRIVFLLAGSFIVIKVLGGTVATAVGVATFAAFVSAVGALGVLIWYWLKRKKHLDQYLIEQTVPESTVSTV QLFKELFAYAIPYVVIGLTIPLYQQIDTLTFNSIMQAIGQGDIAERALGIFTMWTHKLIMIPVSLATAFSLTLVPAITKS FTEKQYRYLKLQITQTFQANMFLTLPAVIGISSLAYPIYTAFYDSDPLGGQVLMWYAPVALLFALFTVTAAILQGINQQK HAIIALIMGVILKFVCNVIFIRYFGTVGAILATAVGFLASVWYTNQQIKKYAHYSFGVVYKRTFQIAVLTLVMVVTVKLS QWILSFMISPDSRIGALITVAICAGLGGLVYGLLAIRTGVLERVFGGEALEKIQRKLGNRFKIKLKSKGA >Mature_549_residues SDSKFLRGTLIVTLGTFLVKFLGMIYVFPFHALVGTEGGTLYTYGYIPYTIFLSIATAGVPLAVSKFVSKYNALGDYKTS RRMFRSGMVMMIVTGVLSFLVLYMTAPLFAEAMLGKQSVHSNIGEVTTIIRLVSFALIVVPAASLIRGYFQGHQSMGPTT VSQIIEQIIRIVFLLAGSFIVIKVLGGTVATAVGVATFAAFVSAVGALGVLIWYWLKRKKHLDQYLIEQTVPESTVSTVQ LFKELFAYAIPYVVIGLTIPLYQQIDTLTFNSIMQAIGQGDIAERALGIFTMWTHKLIMIPVSLATAFSLTLVPAITKSF TEKQYRYLKLQITQTFQANMFLTLPAVIGISSLAYPIYTAFYDSDPLGGQVLMWYAPVALLFALFTVTAAILQGINQQKH AIIALIMGVILKFVCNVIFIRYFGTVGAILATAVGFLASVWYTNQQIKKYAHYSFGVVYKRTFQIAVLTLVMVVTVKLSQ WILSFMISPDSRIGALITVAICAGLGGLVYGLLAIRTGVLERVFGGEALEKIQRKLGNRFKIKLKSKGA
Specific function: May play a role in cell division, although it is not essential for growth [H]
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential). Note=Localizes at the septum [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polysaccharide synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002797 [H]
Pfam domain/function: PF01943 Polysacc_synt [H]
EC number: NA
Molecular weight: Translated: 60392; Mature: 60261
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSKFLRGTLIVTLGTFLVKFLGMIYVFPFHALVGTEGGTLYTYGYIPYTIFLSIATAG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHCC VPLAVSKFVSKYNALGDYKTSRRMFRSGMVMMIVTGVLSFLVLYMTAPLFAEAMLGKQSV CHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HSNIGEVTTIIRLVSFALIVVPAASLIRGYFQGHQSMGPTTVSQIIEQIIRIVFLLAGSF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHH IVIKVLGGTVATAVGVATFAAFVSAVGALGVLIWYWLKRKKHLDQYLIEQTVPESTVSTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH QLFKELFAYAIPYVVIGLTIPLYQQIDTLTFNSIMQAIGQGDIAERALGIFTMWTHKLIM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH IPVSLATAFSLTLVPAITKSFTEKQYRYLKLQITQTFQANMFLTLPAVIGISSLAYPIYT HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHH AFYDSDPLGGQVLMWYAPVALLFALFTVTAAILQGINQQKHAIIALIMGVILKFVCNVIF HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH IRYFGTVGAILATAVGFLASVWYTNQQIKKYAHYSFGVVYKRTFQIAVLTLVMVVTVKLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QWILSFMISPDSRIGALITVAICAGLGGLVYGLLAIRTGVLERVFGGEALEKIQRKLGNR HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCE FKIKLKSKGA EEEEEECCCC >Mature Secondary Structure SDSKFLRGTLIVTLGTFLVKFLGMIYVFPFHALVGTEGGTLYTYGYIPYTIFLSIATAG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHCC VPLAVSKFVSKYNALGDYKTSRRMFRSGMVMMIVTGVLSFLVLYMTAPLFAEAMLGKQSV CHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HSNIGEVTTIIRLVSFALIVVPAASLIRGYFQGHQSMGPTTVSQIIEQIIRIVFLLAGSF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHH IVIKVLGGTVATAVGVATFAAFVSAVGALGVLIWYWLKRKKHLDQYLIEQTVPESTVSTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH QLFKELFAYAIPYVVIGLTIPLYQQIDTLTFNSIMQAIGQGDIAERALGIFTMWTHKLIM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH IPVSLATAFSLTLVPAITKSFTEKQYRYLKLQITQTFQANMFLTLPAVIGISSLAYPIYT HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHH AFYDSDPLGGQVLMWYAPVALLFALFTVTAAILQGINQQKHAIIALIMGVILKFVCNVIF HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH IRYFGTVGAILATAVGFLASVWYTNQQIKKYAHYSFGVVYKRTFQIAVLTLVMVVTVKLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QWILSFMISPDSRIGALITVAICAGLGGLVYGLLAIRTGVLERVFGGEALEKIQRKLGNR HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCE FKIKLKSKGA EEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]