Click here to switch to the map view.

The map label for this gene is ysmA [H]

Identifier: 118479667

GI number: 118479667

Start: 4316019

End: 4316465

Strand: Reverse

Name: ysmA [H]

Synonym: BALH_4099

Alternate gene names: 118479667

Gene position: 4316465-4316019 (Counterclockwise)

Preceding gene: 118479668

Following gene: 118479665

Centisome position: 82.11

GC content: 37.14

Gene sequence:

>447_bases
ATGAAGAGGATTTCTTATATTGAAGACTTTGAGCGATGGGAAAGTGGTTTTTCGTTTTACAACCCTGTAAAGGTTCGTTT
TGGTGAAGTAGATATGTTTGGACATGTAAATAATGTCGTTGCCTTTACCTATTTTGAAGAAGCACGTATCGCATTGTTTA
AAGAACTTGGATTTATGCAAGAATGGACGCATGAATCTTCAGAAACGATGATTGTTGTTGCGGATTTACAATGTAATTTT
ATTAAGCAAATATATTTTGATGAACAGTTGAAGGTGTATGTAAAGGCGGGATCAGTTGGGAATTCTTCTTTAGATTTGCA
TTATATGGTGAAGAATGCAGAAGGAGAAGTTTGCTTAGTTGGCCGTGGAATGATGGTGCAAGCATCGAAAAGAACGGGAA
GAGGCGAACCGTGGCCTGAAGAGTGGAAGAAAAAATTACTACAATAA

Upstream 100 bases:

>100_bases
ACTATTAATAAATATTGCCTCTTCATATCGAAGAGGCAATATTTATAACTTTATTTTTCTGTTTATTCTGTTTATTAGAA
GGTGAAAAGGAGAGGGAACA

Downstream 100 bases:

>100_bases
TAGAGTGAAAGAAAAATAAGAGAGCAAAATGCTCTCTTATTTTTTGTCTTCCATTGCTTCTTCTAATGTTAAATGGTGTT
TATATATGTATGTAGCGTAT

Product: 4-hydroxybenzoyl-CoA thioesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MKRISYIEDFERWESGFSFYNPVKVRFGEVDMFGHVNNVVAFTYFEEARIALFKELGFMQEWTHESSETMIVVADLQCNF
IKQIYFDEQLKVYVKAGSVGNSSLDLHYMVKNAEGEVCLVGRGMMVQASKRTGRGEPWPEEWKKKLLQ

Sequences:

>Translated_148_residues
MKRISYIEDFERWESGFSFYNPVKVRFGEVDMFGHVNNVVAFTYFEEARIALFKELGFMQEWTHESSETMIVVADLQCNF
IKQIYFDEQLKVYVKAGSVGNSSLDLHYMVKNAEGEVCLVGRGMMVQASKRTGRGEPWPEEWKKKLLQ
>Mature_148_residues
MKRISYIEDFERWESGFSFYNPVKVRFGEVDMFGHVNNVVAFTYFEEARIALFKELGFMQEWTHESSETMIVVADLQCNF
IKQIYFDEQLKVYVKAGSVGNSSLDLHYMVKNAEGEVCLVGRGMMVQASKRTGRGEPWPEEWKKKLLQ

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 17284; Mature: 17284

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRISYIEDFERWESGFSFYNPVKVRFGEVDMFGHVNNVVAFTYFEEARIALFKELGFMQ
CCCCHHHHHHHHHHCCCCCCCCEEEEECCEEECCCCCCEEEEEEEHHHHHHHHHHHCHHH
EWTHESSETMIVVADLQCNFIKQIYFDEQLKVYVKAGSVGNSSLDLHYMVKNAEGEVCLV
HHCCCCCCEEEEEECCCCHHHHHHHCCCEEEEEEEECCCCCCCEEEEEEEECCCCCEEEE
GRGMMVQASKRTGRGEPWPEEWKKKLLQ
ECCEEEEECCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MKRISYIEDFERWESGFSFYNPVKVRFGEVDMFGHVNNVVAFTYFEEARIALFKELGFMQ
CCCCHHHHHHHHHHCCCCCCCCEEEEECCEEECCCCCCEEEEEEEHHHHHHHHHHHCHHH
EWTHESSETMIVVADLQCNFIKQIYFDEQLKVYVKAGSVGNSSLDLHYMVKNAEGEVCLV
HHCCCCCCEEEEEECCCCHHHHHHHCCCEEEEEEEECCCCCCCEEEEEEEECCCCCEEEE
GRGMMVQASKRTGRGEPWPEEWKKKLLQ
ECCEEEEECCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3114423; 8969504; 9384377 [H]