| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is ysxE [H]
Identifier: 118479625
GI number: 118479625
Start: 4272876
End: 4273901
Strand: Reverse
Name: ysxE [H]
Synonym: BALH_4052
Alternate gene names: 118479625
Gene position: 4273901-4272876 (Counterclockwise)
Preceding gene: 118479626
Following gene: 118479624
Centisome position: 81.3
GC content: 37.62
Gene sequence:
>1026_bases ATGGATATGGAATTACGAAATCGCTATGAACCCATTGTAAGGCAATATAGATTGGATACGCAGCATATGGAAGAGCACGG AAGCGTAACGAAAATTTATACGAATCAAGGTCCATATGCGCTCAAGAAAATAGAAGGCAGGAAGTTAGAGCGGAATAACT TTCTGCATCATATTCAATATTTGAAGGAGAAAGGTTTTTCAAATTATGTACCTATATACCACGCGACGGACGGAAATTAT ATTTTAAGTGACGGTACGTATAATTATTATTTAATGCCTTGGTTAGAACGTGCGGAAGGGAACGGCGAGGATAATGATCA ATACCATAAAATGTTTCAAACTCTCGGGACGTTGCATCAAAAAACGGTAAAAGAAGAAACGTATACAGAAGAAGATTTAG AAAAGCATTATACGAATATATCTGATCGCTGGGAGAATGATGGTGAAATGTTAGAAGAGTTCCTCGTAGAATCGGAAGCG AAGTGGTATATGTCTCCATTTGAACTGCAATATTGTACGTACTATCATCATGTAATGAGAGCGCGTGAATTTGCAACGAA GCAATTAAATGAGTGGAACGATGCGATGAAAGAAAAAGAGAAAACGCGTATTACGTTTGTGCATGGTAATGTGTCACTTA ATCATTTTTTATTTGACTATGAGCGGAATGGCTATTTTATTAGTTTAGAAAAATCGAAGTTTGCAACGCCTGTGCAAGAT ATTGTAGGGTTTTATTCTCGGTCGTTAAACACATACCCAATTGCGCGAAGTGATCGGTTTGAATGGTTTCAAATGTATCA AAAAAATTTCCCTTTTACGAAAGAAGAGCAACTACTTATGTTTGCGTATATGACGTATCCATCGCAATTTATTCGGCAAA TCCAGTCTTATAAGAAAAGAAGAGAGCGTCGTAATGAGGAAAATGAACTTCTCGGGGTAAAGAGCTTGCAACAAGCGCAT TGGCTCGTTAGTAATATAGAATATTTCCTTTCGCAATTACAAGCTGCCCAGCAAGGGAACGGATAA
Upstream 100 bases:
>100_bases TTATTTATATTCCTGTTTCAAGAGCAAAAGCGAAATAAGTGAGTGTTTTCACTCACTTATTTTTCTAAAGGCTATGTTTT GAATAGAAAGGGTTATTCGT
Downstream 100 bases:
>100_bases AGGAGATAAGTAGAGGATGCTACTTATCTTCTTTTTTATTAGCTCGAAATGTAGTAGTCTTAAATTTATCTTGACGAATA AGGTTTCGTTTTTTACACTA
Product: hypothetical protein
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MDMELRNRYEPIVRQYRLDTQHMEEHGSVTKIYTNQGPYALKKIEGRKLERNNFLHHIQYLKEKGFSNYVPIYHATDGNY ILSDGTYNYYLMPWLERAEGNGEDNDQYHKMFQTLGTLHQKTVKEETYTEEDLEKHYTNISDRWENDGEMLEEFLVESEA KWYMSPFELQYCTYYHHVMRAREFATKQLNEWNDAMKEKEKTRITFVHGNVSLNHFLFDYERNGYFISLEKSKFATPVQD IVGFYSRSLNTYPIARSDRFEWFQMYQKNFPFTKEEQLLMFAYMTYPSQFIRQIQSYKKRRERRNEENELLGVKSLQQAH WLVSNIEYFLSQLQAAQQGNG
Sequences:
>Translated_341_residues MDMELRNRYEPIVRQYRLDTQHMEEHGSVTKIYTNQGPYALKKIEGRKLERNNFLHHIQYLKEKGFSNYVPIYHATDGNY ILSDGTYNYYLMPWLERAEGNGEDNDQYHKMFQTLGTLHQKTVKEETYTEEDLEKHYTNISDRWENDGEMLEEFLVESEA KWYMSPFELQYCTYYHHVMRAREFATKQLNEWNDAMKEKEKTRITFVHGNVSLNHFLFDYERNGYFISLEKSKFATPVQD IVGFYSRSLNTYPIARSDRFEWFQMYQKNFPFTKEEQLLMFAYMTYPSQFIRQIQSYKKRRERRNEENELLGVKSLQQAH WLVSNIEYFLSQLQAAQQGNG >Mature_341_residues MDMELRNRYEPIVRQYRLDTQHMEEHGSVTKIYTNQGPYALKKIEGRKLERNNFLHHIQYLKEKGFSNYVPIYHATDGNY ILSDGTYNYYLMPWLERAEGNGEDNDQYHKMFQTLGTLHQKTVKEETYTEEDLEKHYTNISDRWENDGEMLEEFLVESEA KWYMSPFELQYCTYYHHVMRAREFATKQLNEWNDAMKEKEKTRITFVHGNVSLNHFLFDYERNGYFISLEKSKFATPVQD IVGFYSRSLNTYPIARSDRFEWFQMYQKNFPFTKEEQLLMFAYMTYPSQFIRQIQSYKKRRERRNEENELLGVKSLQQAH WLVSNIEYFLSQLQAAQQGNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011009 - InterPro: IPR014253 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41270; Mature: 41270
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMELRNRYEPIVRQYRLDTQHMEEHGSVTKIYTNQGPYALKKIEGRKLERNNFLHHIQY CCCCHHHHHHHHHHHHHCCHHHHHHCCCEEEEEECCCCHHHHHCCCCCCHHHHHHHHHHH LKEKGFSNYVPIYHATDGNYILSDGTYNYYLMPWLERAEGNGEDNDQYHKMFQTLGTLHQ HHHCCCCCCCCEEEECCCCEEEECCCEEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHH KTVKEETYTEEDLEKHYTNISDRWENDGEMLEEFLVESEAKWYMSPFELQYCTYYHHVMR HHHHHHHCCHHHHHHHHCCHHHHCCCCHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHH AREFATKQLNEWNDAMKEKEKTRITFVHGNVSLNHFLFDYERNGYFISLEKSKFATPVQD HHHHHHHHHHHHHHHHHHHHCCEEEEEECCEEEEEEEEEEECCCEEEEEECCCCCCCHHH IVGFYSRSLNTYPIARSDRFEWFQMYQKNFPFTKEEQLLMFAYMTYPSQFIRQIQSYKKR HHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHEEHHHHHHCHHHHHHHHHHHHHH RERRNEENELLGVKSLQQAHWLVSNIEYFLSQLQAAQQGNG HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDMELRNRYEPIVRQYRLDTQHMEEHGSVTKIYTNQGPYALKKIEGRKLERNNFLHHIQY CCCCHHHHHHHHHHHHHCCHHHHHHCCCEEEEEECCCCHHHHHCCCCCCHHHHHHHHHHH LKEKGFSNYVPIYHATDGNYILSDGTYNYYLMPWLERAEGNGEDNDQYHKMFQTLGTLHQ HHHCCCCCCCCEEEECCCCEEEECCCEEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHH KTVKEETYTEEDLEKHYTNISDRWENDGEMLEEFLVESEAKWYMSPFELQYCTYYHHVMR HHHHHHHCCHHHHHHHHCCHHHHCCCCHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHH AREFATKQLNEWNDAMKEKEKTRITFVHGNVSLNHFLFDYERNGYFISLEKSKFATPVQD HHHHHHHHHHHHHHHHHHHHCCEEEEEECCEEEEEEEEEEECCCEEEEEECCCCCCCHHH IVGFYSRSLNTYPIARSDRFEWFQMYQKNFPFTKEEQLLMFAYMTYPSQFIRQIQSYKKR HHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHEEHHHHHHCHHHHHHHHHHHHHH RERRNEENELLGVKSLQQAHWLVSNIEYFLSQLQAAQQGNG HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8449878; 9384377 [H]