Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
---|---|
Accession | NC_008600 |
Length | 5,257,091 |
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The map label for this gene is yrbG [H]
Identifier: 118479571
GI number: 118479571
Start: 4211367
End: 4212014
Strand: Reverse
Name: yrbG [H]
Synonym: BALH_3995
Alternate gene names: 118479571
Gene position: 4212014-4211367 (Counterclockwise)
Preceding gene: 118479572
Following gene: 118479569
Centisome position: 80.12
GC content: 34.26
Gene sequence:
>648_bases ATGGAATGGGTATCAGTAATTGGCCGGACGATGCTGTTGTATATTATCATCTTAATTATCTTTCGTCTTATGGGTAAACG TGAAATAGGAGAATTGAGTGTATTAGATTTAGTCGTATTCATTATGCTTGGTGAATTGGCTGTAGTCGCAATTGAAAATA CGGATAAATCACTTTGGCATCAATTAGTTCCGATGCTCTTCCTTATGTGTATACAGATCATGTTATCTGTCATTTCTTTA AAGTTTCAACGATTTCGGCATTTAATAGAAGGCGAACCAGCAATCATTATTAATGCTGGAAAAATTGATGAAAAAAAGAT GAGAAACCAGCGATATAATATAGATGATTTAATGATGCAATTAAGAGAGCAGGGAGTCGGAGATATTAGGGATGTAGAAT ACGCTATTTTAGAACCATCTGGGAAGTTATCTGTCTTTCAAAAACAAAAAGGCGGGCAGGACGCATTGCAGTTTACTCTT CCCCTTATTATCGATGGAGAAATTCAATCTAGCCATTTGCAAATGATTGAACATACAGATGAATGGCTTATTGGGAAATT AAAAAACTTAGGTTATAACGATATCGCGCAAATTTTATACTGTAGCTTTCAAAATGGACAATTTTTTGTTGATTTAAAAG AAAACTAG
Upstream 100 bases:
>100_bases TACATTCCCCCTTTTTAATACAAGCATATTTTCCTTTTGCTTAAGTTAGACTAGTTTCTTTTTTATAGGGGAGTCTATAC GTAAAAAAGGAGATGTAGAA
Downstream 100 bases:
>100_bases AGGCTTACGATATGAAATAGTAAGCCCGTTCACTTCAAAAATGAAAGTTTTCGAATGATAGGGAGACGACTTAACTCTTC TTTTCGAATGAGTTTGAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MEWVSVIGRTMLLYIIILIIFRLMGKREIGELSVLDLVVFIMLGELAVVAIENTDKSLWHQLVPMLFLMCIQIMLSVISL KFQRFRHLIEGEPAIIINAGKIDEKKMRNQRYNIDDLMMQLREQGVGDIRDVEYAILEPSGKLSVFQKQKGGQDALQFTL PLIIDGEIQSSHLQMIEHTDEWLIGKLKNLGYNDIAQILYCSFQNGQFFVDLKEN
Sequences:
>Translated_215_residues MEWVSVIGRTMLLYIIILIIFRLMGKREIGELSVLDLVVFIMLGELAVVAIENTDKSLWHQLVPMLFLMCIQIMLSVISL KFQRFRHLIEGEPAIIINAGKIDEKKMRNQRYNIDDLMMQLREQGVGDIRDVEYAILEPSGKLSVFQKQKGGQDALQFTL PLIIDGEIQSSHLQMIEHTDEWLIGKLKNLGYNDIAQILYCSFQNGQFFVDLKEN >Mature_215_residues MEWVSVIGRTMLLYIIILIIFRLMGKREIGELSVLDLVVFIMLGELAVVAIENTDKSLWHQLVPMLFLMCIQIMLSVISL KFQRFRHLIEGEPAIIINAGKIDEKKMRNQRYNIDDLMMQLREQGVGDIRDVEYAILEPSGKLSVFQKQKGGQDALQFTL PLIIDGEIQSSHLQMIEHTDEWLIGKLKNLGYNDIAQILYCSFQNGQFFVDLKEN
Specific function: Unknown
COG id: COG2323
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0702 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007353 - InterPro: IPR023090 [H]
Pfam domain/function: PF04239 DUF421 [H]
EC number: NA
Molecular weight: Translated: 24802; Mature: 24802
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEWVSVIGRTMLLYIIILIIFRLMGKREIGELSVLDLVVFIMLGELAVVAIENTDKSLWH CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCHHHHH QLVPMLFLMCIQIMLSVISLKFQRFRHLIEGEPAIIINAGKIDEKKMRNQRYNIDDLMMQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCHHHHHHH LREQGVGDIRDVEYAILEPSGKLSVFQKQKGGQDALQFTLPLIIDGEIQSSHLQMIEHTD HHHCCCCCHHHCEEEEECCCCCEEHHHHCCCCHHHHHEEECEEEECCCCHHHHHHHHHHH EWLIGKLKNLGYNDIAQILYCSFQNGQFFVDLKEN HHHHHHHHHCCHHHHHHHHHHEECCCEEEEEECCC >Mature Secondary Structure MEWVSVIGRTMLLYIIILIIFRLMGKREIGELSVLDLVVFIMLGELAVVAIENTDKSLWH CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCHHHHH QLVPMLFLMCIQIMLSVISLKFQRFRHLIEGEPAIIINAGKIDEKKMRNQRYNIDDLMMQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCHHHHHHH LREQGVGDIRDVEYAILEPSGKLSVFQKQKGGQDALQFTLPLIIDGEIQSSHLQMIEHTD HHHCCCCCHHHCEEEEECCCCCEEHHHHCCCCHHHHHEEECEEEECCCCHHHHHHHHHHH EWLIGKLKNLGYNDIAQILYCSFQNGQFFVDLKEN HHHHHHHHHCCHHHHHHHHHHEECCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]