| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is recJ [H]
Identifier: 118479566
GI number: 118479566
Start: 4203296
End: 4205692
Strand: Reverse
Name: recJ [H]
Synonym: BALH_3990
Alternate gene names: 118479566
Gene position: 4205692-4203296 (Counterclockwise)
Preceding gene: 118479567
Following gene: 118479565
Centisome position: 80.0
GC content: 38.34
Gene sequence:
>2397_bases ATGATATTGTCACCCCTTAATCTGTCTTGTATAATGAACAGGTTAAGGGGTGATTTCGTGTTACAACCGAAGACGCGTTG GAAAGAAAAAGAATATAATGGCGAGCGAGTGAGTGAATTAGCAAGTAAATTACAATTATCACCGCTTGTCGTTTCGTTAT TCCTCGGTAGAGGACTAGATACAGAAGATAAGATTTTAGATTTTTTAAATACAGAAAATCAAGAATTTCATGATCCATTT TTATTAGAAGGAATGGATAGAACGGTAGAACGTGTAAATAAGGCGATTCAAAATGGAGAGCAAATATTAATATTTGGTGA CTACGATGCGGACGGAGTAAGTAGTACGACTGTATTATATCTTGCCCTACAAGAATTAGGTGCAGACGTAGAATTTTATA TCCCAAACCGTTTTACAGAAGGTTATGGACCAAACGAAGAAGCATTCCGTTGGGCGCATAGCGCAGGATTCTCACTTATT ATTACTGTTGATACTGGTATCGCAGCTGTACATGAAGCGAAAGTAGCGAAGGAACTTGGGATAGATCTTATTATTACGGA TCACCATGAGCCGCCACCAGAATTGCCAGAAGCACTTGCGATTATTCATCCGAAATTAGATGGCGGTGTGTATCCGTTTC ACTATTTAGCGGGCGTTGGTGTTGCGTTTAAAGTTGCGCATGCACTACTGGGCCGTGTACCAGAACATTTATTAGAAATT GCAGTAATTGGTACAGTAGCCGATTTAGTATCACTTCACGGTGAAAATAGATTGCTAGTGAAGCGCGGTTTAAAACATAT GCGCATGACGAAAAATATTGGACTAAAGGCGCTATTTAAAGTAGCTAACGTTTCGCAAAGTGAAATTACAGAAGAGAGTA TTGGCTTCTCAATCGCACCTCGTATTAATGCAGTTGGACGTTTAGAAGATGCTACGCCGGCTGTACATCTTTTATTATCA GAGGATCCGGAAGAAGCGAAAGAGCTGGCTGAAGAAATTGATGAACTGAACAAACTGCGAAAAGATATTGTAAAGCAAAT TACAGAAGAAGCTATCGCTGAGGTGGAAAATAATTTCCCGCCTGAAGACAATAAAGTATTAGTGCTTGCAAAAGAAGGCT GGAATCCAGGTGTAATTGGAATTGTAGCTTCTAAATTAGTTGAACGTTTTTATCGTCCAACGATTGTATTATGCATTGAT CCTGTAAAAGAAACTGCAAAAGGTTCAGCGCGTAGTATTGCAGGATTCGATTTGTTTGCAAACTTGTCAGATTGTAGAGA GTTATTGCCACACTTCGGGGGACATCCGATGGCAGCGGGAATGACGCTACATATGAATGATGTAGATGAATTACGCCGCC GTTTAAATGAGCAAGCAGAGGTAATTTTAACGGAAGAAGATTTTATCCCAATTACAGCTGTCGATGCTTTTTGTAAAGTG GAGGACGTAACACTTGCAGCAATCGAGGATATGCAAAAGTTGGCGCCATTTGGTGTTGGAAATCCAAAGCCACGTATTGC GGTGAAGGATGCAGAGTTAGAAAGTATTCGTGCAATCGGATCAGACGGTTCTCATTTAAAAATGGCTCTTCGTGATGGAC AGGCAACACTTGATACAATCGGGTTTGGGTTTGGAGCGTACGCGAAAGAAATTTCTCCAGTTGCAAAGGTATCTGTAATT GGGGAAGCGTCTATCAATGAATGGAATAATTTTAAGAAGCCGCAATTAATGGTGCAAGATATTGCTGTAGAGGCATGGCA ATTATTTGATTGGCGTAGTATGCGTAACGTAGAAGCAAATTTAGCAGAACTTCCGAAAGAAAAAATAACGATGGTGTATT TTTCTAAAGAGGTATTGCATAAATTTTCTTTAGAAGACTATAAAGAGCATATGATGCATGCATCAGAAGTAACCGAGTTA GATGAGCAATACATCGTGTTACTTGATTTACCAAAAGGAACAGATGAATTACGAGATCTATTTAAAGTTGGGTTCCCGTC GCGAATTTATACGCTATTTTATCAAGAGAATAATCATTTATTTAGTACTGTTCCAACGAGGGATCACTTTAAATGGTACT ATTCATTCTTGAGCCAAAAATCACCATTTTCTTTAAGACAATATGGAGAACAACTATGTCAACATAAAGGTTGGTCAAAA GATACAGTAAATTTCATGACACAGGTGTTTTTTGAGTTAGAATTTGTTACAATAAAAGATGGCGTCATTTTTATGGCAGA CAAAAAACAAAAGCGTGATTTAATTGAATCGAACACATATCGTGAGAAAATGAACCACTTACAATTAGAAAAAGAGTTGG TTTATAGCACATATCAGCAACTATATACATGGTTTGAAACGATTCGTAATCATAAAGAAGTAGAACAGCTAGGGTAA
Upstream 100 bases:
>100_bases AACAAGATAACGTACAAAATGTGTTTGTACATATAAATCCGTATTCTCCAAATTAAATATTATTAACATTTTAGTATATA GATATTGCATCGTAGTTTGC
Downstream 100 bases:
>100_bases AGGATTTGTATTTACAAACCTTTTAGATCTGAGGAGGATTCAGAAATATGGATTTCAAGCAACATATCGCAATTGTACCG GACTATCCAAAAGAAGGTAT
Product: exonuclease RecJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 798; Mature: 798
Protein sequence:
>798_residues MILSPLNLSCIMNRLRGDFVLQPKTRWKEKEYNGERVSELASKLQLSPLVVSLFLGRGLDTEDKILDFLNTENQEFHDPF LLEGMDRTVERVNKAIQNGEQILIFGDYDADGVSSTTVLYLALQELGADVEFYIPNRFTEGYGPNEEAFRWAHSAGFSLI ITVDTGIAAVHEAKVAKELGIDLIITDHHEPPPELPEALAIIHPKLDGGVYPFHYLAGVGVAFKVAHALLGRVPEHLLEI AVIGTVADLVSLHGENRLLVKRGLKHMRMTKNIGLKALFKVANVSQSEITEESIGFSIAPRINAVGRLEDATPAVHLLLS EDPEEAKELAEEIDELNKLRKDIVKQITEEAIAEVENNFPPEDNKVLVLAKEGWNPGVIGIVASKLVERFYRPTIVLCID PVKETAKGSARSIAGFDLFANLSDCRELLPHFGGHPMAAGMTLHMNDVDELRRRLNEQAEVILTEEDFIPITAVDAFCKV EDVTLAAIEDMQKLAPFGVGNPKPRIAVKDAELESIRAIGSDGSHLKMALRDGQATLDTIGFGFGAYAKEISPVAKVSVI GEASINEWNNFKKPQLMVQDIAVEAWQLFDWRSMRNVEANLAELPKEKITMVYFSKEVLHKFSLEDYKEHMMHASEVTEL DEQYIVLLDLPKGTDELRDLFKVGFPSRIYTLFYQENNHLFSTVPTRDHFKWYYSFLSQKSPFSLRQYGEQLCQHKGWSK DTVNFMTQVFFELEFVTIKDGVIFMADKKQKRDLIESNTYREKMNHLQLEKELVYSTYQQLYTWFETIRNHKEVEQLG
Sequences:
>Translated_798_residues MILSPLNLSCIMNRLRGDFVLQPKTRWKEKEYNGERVSELASKLQLSPLVVSLFLGRGLDTEDKILDFLNTENQEFHDPF LLEGMDRTVERVNKAIQNGEQILIFGDYDADGVSSTTVLYLALQELGADVEFYIPNRFTEGYGPNEEAFRWAHSAGFSLI ITVDTGIAAVHEAKVAKELGIDLIITDHHEPPPELPEALAIIHPKLDGGVYPFHYLAGVGVAFKVAHALLGRVPEHLLEI AVIGTVADLVSLHGENRLLVKRGLKHMRMTKNIGLKALFKVANVSQSEITEESIGFSIAPRINAVGRLEDATPAVHLLLS EDPEEAKELAEEIDELNKLRKDIVKQITEEAIAEVENNFPPEDNKVLVLAKEGWNPGVIGIVASKLVERFYRPTIVLCID PVKETAKGSARSIAGFDLFANLSDCRELLPHFGGHPMAAGMTLHMNDVDELRRRLNEQAEVILTEEDFIPITAVDAFCKV EDVTLAAIEDMQKLAPFGVGNPKPRIAVKDAELESIRAIGSDGSHLKMALRDGQATLDTIGFGFGAYAKEISPVAKVSVI GEASINEWNNFKKPQLMVQDIAVEAWQLFDWRSMRNVEANLAELPKEKITMVYFSKEVLHKFSLEDYKEHMMHASEVTEL DEQYIVLLDLPKGTDELRDLFKVGFPSRIYTLFYQENNHLFSTVPTRDHFKWYYSFLSQKSPFSLRQYGEQLCQHKGWSK DTVNFMTQVFFELEFVTIKDGVIFMADKKQKRDLIESNTYREKMNHLQLEKELVYSTYQQLYTWFETIRNHKEVEQLG >Mature_798_residues MILSPLNLSCIMNRLRGDFVLQPKTRWKEKEYNGERVSELASKLQLSPLVVSLFLGRGLDTEDKILDFLNTENQEFHDPF LLEGMDRTVERVNKAIQNGEQILIFGDYDADGVSSTTVLYLALQELGADVEFYIPNRFTEGYGPNEEAFRWAHSAGFSLI ITVDTGIAAVHEAKVAKELGIDLIITDHHEPPPELPEALAIIHPKLDGGVYPFHYLAGVGVAFKVAHALLGRVPEHLLEI AVIGTVADLVSLHGENRLLVKRGLKHMRMTKNIGLKALFKVANVSQSEITEESIGFSIAPRINAVGRLEDATPAVHLLLS EDPEEAKELAEEIDELNKLRKDIVKQITEEAIAEVENNFPPEDNKVLVLAKEGWNPGVIGIVASKLVERFYRPTIVLCID PVKETAKGSARSIAGFDLFANLSDCRELLPHFGGHPMAAGMTLHMNDVDELRRRLNEQAEVILTEEDFIPITAVDAFCKV EDVTLAAIEDMQKLAPFGVGNPKPRIAVKDAELESIRAIGSDGSHLKMALRDGQATLDTIGFGFGAYAKEISPVAKVSVI GEASINEWNNFKKPQLMVQDIAVEAWQLFDWRSMRNVEANLAELPKEKITMVYFSKEVLHKFSLEDYKEHMMHASEVTEL DEQYIVLLDLPKGTDELRDLFKVGFPSRIYTLFYQENNHLFSTVPTRDHFKWYYSFLSQKSPFSLRQYGEQLCQHKGWSK DTVNFMTQVFFELEFVTIKDGVIFMADKKQKRDLIESNTYREKMNHLQLEKELVYSTYQQLYTWFETIRNHKEVEQLG
Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]
COG id: COG0608
COG function: function code L; Single-stranded DNA-specific exonuclease
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 OB DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1789259, Length=567, Percent_Identity=33.1569664902998, Blast_Score=261, Evalue=1e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003156 - InterPro: IPR001667 - InterPro: IPR004610 - InterPro: IPR018779 [H]
Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]
EC number: 3.1.-.- [C]
Molecular weight: Translated: 90280; Mature: 90280
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILSPLNLSCIMNRLRGDFVLQPKTRWKEKEYNGERVSELASKLQLSPLVVSLFLGRGLD CCCCCCCHHHHHHHHCCCEEECCCHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCC TEDKILDFLNTENQEFHDPFLLEGMDRTVERVNKAIQNGEQILIFGDYDADGVSSTTVLY CHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHH LALQELGADVEFYIPNRFTEGYGPNEEAFRWAHSAGFSLIITVDTGIAAVHEAKVAKELG HHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCC IDLIITDHHEPPPELPEALAIIHPKLDGGVYPFHYLAGVGVAFKVAHALLGRVPEHLLEI CEEEEECCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVIGTVADLVSLHGENRLLVKRGLKHMRMTKNIGLKALFKVANVSQSEITEESIGFSIAP HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCEEECC RINAVGRLEDATPAVHLLLSEDPEEAKELAEEIDELNKLRKDIVKQITEEAIAEVENNFP CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PEDNKVLVLAKEGWNPGVIGIVASKLVERFYRPTIVLCIDPVKETAKGSARSIAGFDLFA CCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCCCCCEEHHHHHC NLSDCRELLPHFGGHPMAAGMTLHMNDVDELRRRLNEQAEVILTEEDFIPITAVDAFCKV CHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHCCCCEEEEECCCCCEEEHHHHHHHH EDVTLAAIEDMQKLAPFGVGNPKPRIAVKDAELESIRAIGSDGSHLKMALRDGQATLDTI HHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHCCCCCCEEEEEECCCCHHHHHH GFGFGAYAKEISPVAKVSVIGEASINEWNNFKKPQLMVQDIAVEAWQLFDWRSMRNVEAN HCCHHHHHHHCCCHHHEEEECCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH LAELPKEKITMVYFSKEVLHKFSLEDYKEHMMHASEVTELDEQYIVLLDLPKGTDELRDL HHHCCHHHEEEEEECHHHHHHHCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHH FKVGFPSRIYTLFYQENNHLFSTVPTRDHFKWYYSFLSQKSPFSLRQYGEQLCQHKGWSK HHCCCCCCEEEEEEECCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCH DTVNFMTQVFFELEFVTIKDGVIFMADKKQKRDLIESNTYREKMNHLQLEKELVYSTYQQ HHHHHHHHHHHHEEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYTWFETIRNHKEVEQLG HHHHHHHHHCHHHHHHCC >Mature Secondary Structure MILSPLNLSCIMNRLRGDFVLQPKTRWKEKEYNGERVSELASKLQLSPLVVSLFLGRGLD CCCCCCCHHHHHHHHCCCEEECCCHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCC TEDKILDFLNTENQEFHDPFLLEGMDRTVERVNKAIQNGEQILIFGDYDADGVSSTTVLY CHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHH LALQELGADVEFYIPNRFTEGYGPNEEAFRWAHSAGFSLIITVDTGIAAVHEAKVAKELG HHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCC IDLIITDHHEPPPELPEALAIIHPKLDGGVYPFHYLAGVGVAFKVAHALLGRVPEHLLEI CEEEEECCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVIGTVADLVSLHGENRLLVKRGLKHMRMTKNIGLKALFKVANVSQSEITEESIGFSIAP HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCEEECC RINAVGRLEDATPAVHLLLSEDPEEAKELAEEIDELNKLRKDIVKQITEEAIAEVENNFP CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PEDNKVLVLAKEGWNPGVIGIVASKLVERFYRPTIVLCIDPVKETAKGSARSIAGFDLFA CCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCCCCCEEHHHHHC NLSDCRELLPHFGGHPMAAGMTLHMNDVDELRRRLNEQAEVILTEEDFIPITAVDAFCKV CHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHCCCCEEEEECCCCCEEEHHHHHHHH EDVTLAAIEDMQKLAPFGVGNPKPRIAVKDAELESIRAIGSDGSHLKMALRDGQATLDTI HHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHCCCCCCEEEEEECCCCHHHHHH GFGFGAYAKEISPVAKVSVIGEASINEWNNFKKPQLMVQDIAVEAWQLFDWRSMRNVEAN HCCHHHHHHHCCCHHHEEEECCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH LAELPKEKITMVYFSKEVLHKFSLEDYKEHMMHASEVTELDEQYIVLLDLPKGTDELRDL HHHCCHHHEEEEEECHHHHHHHCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHH FKVGFPSRIYTLFYQENNHLFSTVPTRDHFKWYYSFLSQKSPFSLRQYGEQLCQHKGWSK HHCCCCCCEEEEEEECCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCH DTVNFMTQVFFELEFVTIKDGVIFMADKKQKRDLIESNTYREKMNHLQLEKELVYSTYQQ HHHHHHHHHHHHEEEEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYTWFETIRNHKEVEQLG HHHHHHHHHCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on ester bonds [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]