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The map label for this gene is yrrN [H]

Identifier: 118479544

GI number: 118479544

Start: 4176761

End: 4177690

Strand: Reverse

Name: yrrN [H]

Synonym: BALH_3967

Alternate gene names: 118479544

Gene position: 4177690-4176761 (Counterclockwise)

Preceding gene: 118479545

Following gene: 118479543

Centisome position: 79.47

GC content: 37.1

Gene sequence:

>930_bases
ATGAAGAAACCTGAATTGTTAGTAACGCCAAAAGCAGTGGCGGATATCGAACCTCTTGCGAAAGCAGGAGCAGATGCGGT
AATGATCGGTGAGCAAAAGTTTGGTTTACGTTTAGCAGGTGAGTTTTCACGTGAAGATGTGAAACAAGCTGTGAAAATTG
CACATGAAAATGGTGTGAAAGTATACGTAGCAATGAACGCTATGTTCCACAACGATAAAGTAGAAGAATTAACAGACTAT
GTTGCATTTTTAAACGAAGTACATGTAGATGCAATTGTTTTTGGAGACCCAGCAGTATTAATGGCGGTCCGCGAAGTAGC
GCCAAATATGCAATTGCACTGGAATACAGAAACAACAGCAACAAACTGGTTTACTTGTAACTACTGGGGACAAAGAGGAG
CAAAACGTGCTGTATTAGCTCGTGAGCTTAGCTTAGATGAAATTGTTGAGTTAAAAGAAAATGCTGAAGTGGAACTTGAA
GTACAAATTCACGGTATGACTTGTATGTTCCAATCGAAGCGTTCATTAGTAGGAAACTACTTTGAGTATCAAGGACGTCA
TCTTGACATTGAAAAGAAAAAATATGAAGAGAATATGTTCTTATATGACCCAGAGCGTAACAATAAATATCCAATTTATG
AAGATGAAAATGGTACTCACATTATGAGTCCAAACGATATTTGTTTCATCGATGAGCTAGAAGAGCTAATTGATGCTGAA
ATCGACAGCTTAAAAATTGATGGTGTACTAAAAAGCTCTGCATACATTATTGAGGTAACGAAGAAATATCGTAAAGCAAT
TGATTTATGTGTAGAAGATCGTGATGCGTATTATGACGTGAAAGACGATTTATATAAAGAGATAGAAGAAATGCAACCGG
TAAATCGTCCGTTAGATACAGGATTCTTCTTTAAAGAGACGGTTTACTAA

Upstream 100 bases:

>100_bases
ACGTACAATGAATGGCTTATGAACCATGAAGGATATGATACGACGATTTTCCCAATTGGTGATGGAGTAGCTGTTAGTAA
AAAGAGAGGGTGACCAAGGT

Downstream 100 bases:

>100_bases
ACGAGGAGGGTGTAGGAAATGACTGTACAAGAAATTTCACGAGTAATCGATGGCAAACGCGTTATTGTGAAGAAACCTGA
ACTGTTAATCCCTGCGGGTA

Product: U32 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MKKPELLVTPKAVADIEPLAKAGADAVMIGEQKFGLRLAGEFSREDVKQAVKIAHENGVKVYVAMNAMFHNDKVEELTDY
VAFLNEVHVDAIVFGDPAVLMAVREVAPNMQLHWNTETTATNWFTCNYWGQRGAKRAVLARELSLDEIVELKENAEVELE
VQIHGMTCMFQSKRSLVGNYFEYQGRHLDIEKKKYEENMFLYDPERNNKYPIYEDENGTHIMSPNDICFIDELEELIDAE
IDSLKIDGVLKSSAYIIEVTKKYRKAIDLCVEDRDAYYDVKDDLYKEIEEMQPVNRPLDTGFFFKETVY

Sequences:

>Translated_309_residues
MKKPELLVTPKAVADIEPLAKAGADAVMIGEQKFGLRLAGEFSREDVKQAVKIAHENGVKVYVAMNAMFHNDKVEELTDY
VAFLNEVHVDAIVFGDPAVLMAVREVAPNMQLHWNTETTATNWFTCNYWGQRGAKRAVLARELSLDEIVELKENAEVELE
VQIHGMTCMFQSKRSLVGNYFEYQGRHLDIEKKKYEENMFLYDPERNNKYPIYEDENGTHIMSPNDICFIDELEELIDAE
IDSLKIDGVLKSSAYIIEVTKKYRKAIDLCVEDRDAYYDVKDDLYKEIEEMQPVNRPLDTGFFFKETVY
>Mature_309_residues
MKKPELLVTPKAVADIEPLAKAGADAVMIGEQKFGLRLAGEFSREDVKQAVKIAHENGVKVYVAMNAMFHNDKVEELTDY
VAFLNEVHVDAIVFGDPAVLMAVREVAPNMQLHWNTETTATNWFTCNYWGQRGAKRAVLARELSLDEIVELKENAEVELE
VQIHGMTCMFQSKRSLVGNYFEYQGRHLDIEKKKYEENMFLYDPERNNKYPIYEDENGTHIMSPNDICFIDELEELIDAE
IDSLKIDGVLKSSAYIIEVTKKYRKAIDLCVEDRDAYYDVKDDLYKEIEEMQPVNRPLDTGFFFKETVY

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=310, Percent_Identity=32.5806451612903, Blast_Score=134, Evalue=7e-33,
Organism=Escherichia coli, GI87081910, Length=253, Percent_Identity=28.8537549407115, Blast_Score=105, Evalue=5e-24,
Organism=Escherichia coli, GI1789548, Length=297, Percent_Identity=26.2626262626263, Blast_Score=97, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 35607; Mature: 35607

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPELLVTPKAVADIEPLAKAGADAVMIGEQKFGLRLAGEFSREDVKQAVKIAHENGVK
CCCCCEEECCHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCHHHHHHHHHHHHCCCCE
VYVAMNAMFHNDKVEELTDYVAFLNEVHVDAIVFGDPAVLMAVREVAPNMQLHWNTETTA
EEEEEEEEECCCHHHHHHHHHHHHHHHCEEEEEECCHHHHHHHHHHCCCCEEEECCCCCE
TNWFTCNYWGQRGAKRAVLARELSLDEIVELKENAEVELEVQIHGMTCMFQSKRSLVGNY
ECCEEEECCCCCCCHHHHHHHHCCHHHHHHHHCCCCEEEEEEEECEEEEEHHHHHHHHHH
FEYQGRHLDIEKKKYEENMFLYDPERNNKYPIYEDENGTHIMSPNDICFIDELEELIDAE
HHHCCCEECCHHHHCCCCEEEECCCCCCCCCEEECCCCCEEECCCCEEEHHHHHHHHCCC
IDSLKIDGVLKSSAYIIEVTKKYRKAIDLCVEDRDAYYDVKDDLYKEIEEMQPVNRPLDT
CCCEEECEEECCCEEEEEEHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHCCCCCCCCCC
GFFFKETVY
CCEEEECCC
>Mature Secondary Structure
MKKPELLVTPKAVADIEPLAKAGADAVMIGEQKFGLRLAGEFSREDVKQAVKIAHENGVK
CCCCCEEECCHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCHHHHHHHHHHHHCCCCE
VYVAMNAMFHNDKVEELTDYVAFLNEVHVDAIVFGDPAVLMAVREVAPNMQLHWNTETTA
EEEEEEEEECCCHHHHHHHHHHHHHHHCEEEEEECCHHHHHHHHHHCCCCEEEECCCCCE
TNWFTCNYWGQRGAKRAVLARELSLDEIVELKENAEVELEVQIHGMTCMFQSKRSLVGNY
ECCEEEECCCCCCCHHHHHHHHCCHHHHHHHHCCCCEEEEEEEECEEEEEHHHHHHHHHH
FEYQGRHLDIEKKKYEENMFLYDPERNNKYPIYEDENGTHIMSPNDICFIDELEELIDAE
HHHCCCEECCHHHHCCCCEEEECCCCCCCCCEEECCCCCEEECCCCEEEHHHHHHHHCCC
IDSLKIDGVLKSSAYIIEVTKKYRKAIDLCVEDRDAYYDVKDDLYKEIEEMQPVNRPLDT
CCCEEECEEECCCEEEEEEHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHCCCCCCCCCC
GFFFKETVY
CCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]