Click here to switch to the map view.

The map label for this gene is udk [H]

Identifier: 118479542

GI number: 118479542

Start: 4174806

End: 4175444

Strand: Reverse

Name: udk [H]

Synonym: BALH_3965

Alternate gene names: 118479542

Gene position: 4175444-4174806 (Counterclockwise)

Preceding gene: 118479543

Following gene: 118479541

Centisome position: 79.42

GC content: 35.37

Gene sequence:

>639_bases
ATGGGGACGAATAAGCCTGTTGTAATTGGAATTGCTGGTGGTTCAGGGTCAGGTAAGACAAGTGTAACGAAAGCGATTTT
TGACCATTTTAAAGGTCATTCCATTTTAATCTTAGAGCAAGATTATTATTACAAAGATCAAAGCCATTTACCAATGGAAG
AACGTTTAAAAACAAATTATGATCATCCATTAGCGTTTGATAATGATTTGTTAATTGAACATTTGCAGCAGTTGCTTGCA
TATAAACAAGTAGATAAACCTGTATATGACTATACATTGCATACGCGTTCAGAAGAAATTATTCCAGTTGAGCCGAAAGA
TGTAATCATTTTAGAAGGAATTCTTATTTTAGAAGACCCACGTCTTTGTGAGTTAATGGACATTAAGCTATTCGTTGATA
CAGATGCGGACCTTCGTATCCTGCGCCGCATGCAGCGTGATATTAAAGAACGCGGTCGTACGATGGATTCAGTTATTGAT
CAATATGTAAATGTTGTACGTCCAATGCACAATCAATTTATTGAGCCTTCTAAGAAGTTTGCGGATATTATTATCCCTGA
AGGTGGACAAAACCACGTTGCCATTGATATTATGGTTACAAAAATTGCAACAATTCTTGAACAAAAAGTAAATTTGTAA

Upstream 100 bases:

>100_bases
GACATCCGTTGCAGATCGTGAAATTCAAAGTGGATCAACCAGTGTATGTGAATAATATGATGCGCAAAAGCATACTTCAA
TAAGAAAGAGTGATAGTCGA

Downstream 100 bases:

>100_bases
TAGCATAGTAAAAGATATACGATAGGAAGGGATTTTTTCCCTTCCTATCGAATACAATGAAACATGCAACCTCATCTATA
TATAGGTGAGGGCATATTTA

Product: uridine kinase

Products: NA

Alternate protein names: Cytidine monophosphokinase; Uridine monophosphokinase [H]

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MGTNKPVVIGIAGGSGSGKTSVTKAIFDHFKGHSILILEQDYYYKDQSHLPMEERLKTNYDHPLAFDNDLLIEHLQQLLA
YKQVDKPVYDYTLHTRSEEIIPVEPKDVIILEGILILEDPRLCELMDIKLFVDTDADLRILRRMQRDIKERGRTMDSVID
QYVNVVRPMHNQFIEPSKKFADIIIPEGGQNHVAIDIMVTKIATILEQKVNL

Sequences:

>Translated_212_residues
MGTNKPVVIGIAGGSGSGKTSVTKAIFDHFKGHSILILEQDYYYKDQSHLPMEERLKTNYDHPLAFDNDLLIEHLQQLLA
YKQVDKPVYDYTLHTRSEEIIPVEPKDVIILEGILILEDPRLCELMDIKLFVDTDADLRILRRMQRDIKERGRTMDSVID
QYVNVVRPMHNQFIEPSKKFADIIIPEGGQNHVAIDIMVTKIATILEQKVNL
>Mature_211_residues
GTNKPVVIGIAGGSGSGKTSVTKAIFDHFKGHSILILEQDYYYKDQSHLPMEERLKTNYDHPLAFDNDLLIEHLQQLLAY
KQVDKPVYDYTLHTRSEEIIPVEPKDVIILEGILILEDPRLCELMDIKLFVDTDADLRILRRMQRDIKERGRTMDSVIDQ
YVNVVRPMHNQFIEPSKKFADIIIPEGGQNHVAIDIMVTKIATILEQKVNL

Specific function: Pyrimidine salvage pathway. [C]

COG id: COG0572

COG function: function code F; Uridine kinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the uridine kinase family [H]

Homologues:

Organism=Homo sapiens, GI301129207, Length=209, Percent_Identity=41.1483253588517, Blast_Score=176, Evalue=1e-44,
Organism=Homo sapiens, GI57863312, Length=209, Percent_Identity=41.1483253588517, Blast_Score=176, Evalue=2e-44,
Organism=Homo sapiens, GI18699734, Length=215, Percent_Identity=41.3953488372093, Blast_Score=176, Evalue=2e-44,
Organism=Homo sapiens, GI13899253, Length=214, Percent_Identity=38.785046728972, Blast_Score=159, Evalue=1e-39,
Organism=Homo sapiens, GI209863022, Length=152, Percent_Identity=36.8421052631579, Blast_Score=106, Evalue=2e-23,
Organism=Escherichia coli, GI87082034, Length=209, Percent_Identity=52.6315789473684, Blast_Score=228, Evalue=3e-61,
Organism=Caenorhabditis elegans, GI17539894, Length=206, Percent_Identity=42.2330097087379, Blast_Score=170, Evalue=4e-43,
Organism=Caenorhabditis elegans, GI17539892, Length=206, Percent_Identity=42.2330097087379, Blast_Score=170, Evalue=5e-43,
Organism=Caenorhabditis elegans, GI71981181, Length=210, Percent_Identity=35.7142857142857, Blast_Score=134, Evalue=5e-32,
Organism=Saccharomyces cerevisiae, GI6324339, Length=199, Percent_Identity=33.6683417085427, Blast_Score=110, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6320223, Length=191, Percent_Identity=27.2251308900524, Blast_Score=71, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24649624, Length=216, Percent_Identity=41.6666666666667, Blast_Score=170, Evalue=6e-43,
Organism=Drosophila melanogaster, GI221458995, Length=219, Percent_Identity=40.6392694063927, Blast_Score=169, Evalue=1e-42,
Organism=Drosophila melanogaster, GI28573516, Length=205, Percent_Identity=41.4634146341463, Blast_Score=169, Evalue=2e-42,
Organism=Drosophila melanogaster, GI28573514, Length=205, Percent_Identity=41.4634146341463, Blast_Score=169, Evalue=2e-42,
Organism=Drosophila melanogaster, GI28573512, Length=205, Percent_Identity=41.4634146341463, Blast_Score=169, Evalue=2e-42,
Organism=Drosophila melanogaster, GI45550449, Length=205, Percent_Identity=41.4634146341463, Blast_Score=169, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006083
- InterPro:   IPR000764 [H]

Pfam domain/function: PF00485 PRK [H]

EC number: =2.7.1.48 [H]

Molecular weight: Translated: 24339; Mature: 24207

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTNKPVVIGIAGGSGSGKTSVTKAIFDHFKGHSILILEQDYYYKDQSHLPMEERLKTNY
CCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCEECCCCCCCHHHHHHCCC
DHPLAFDNDLLIEHLQQLLAYKQVDKPVYDYTLHTRSEEIIPVEPKDVIILEGILILEDP
CCCCCCCCHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCEEECCCCCEEEEECEEEECCC
RLCELMDIKLFVDTDADLRILRRMQRDIKERGRTMDSVIDQYVNVVRPMHNQFIEPSKKF
CCEEEEEEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
ADIIIPEGGQNHVAIDIMVTKIATILEQKVNL
HEEEECCCCCCCEEEEHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GTNKPVVIGIAGGSGSGKTSVTKAIFDHFKGHSILILEQDYYYKDQSHLPMEERLKTNY
CCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCEECCCCCCCHHHHHHCCC
DHPLAFDNDLLIEHLQQLLAYKQVDKPVYDYTLHTRSEEIIPVEPKDVIILEGILILEDP
CCCCCCCCHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCEEECCCCCEEEEECEEEECCC
RLCELMDIKLFVDTDADLRILRRMQRDIKERGRTMDSVIDQYVNVVRPMHNQFIEPSKKF
CCEEEEEEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
ADIIIPEGGQNHVAIDIMVTKIATILEQKVNL
HEEEECCCCCCCEEEEHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA