Click here to switch to the map view.

The map label for this gene is 118478787

Identifier: 118478787

GI number: 118478787

Start: 3365403

End: 3366248

Strand: Reverse

Name: 118478787

Synonym: BALH_3179

Alternate gene names: NA

Gene position: 3366248-3365403 (Counterclockwise)

Preceding gene: 118478788

Following gene: 118478784

Centisome position: 64.03

GC content: 35.34

Gene sequence:

>846_bases
TTGGAAAACGCTACACATTTTATTGTGTTTGATATAGAGAGAAATTTTAGGCCGTATAAATCAGAAGATCCGTCAGAGAT
AGTTGATATCGGAGCTGTAAAAATAGAAGCAAGTACAATGAAGGTAATTGGAGAATTTTCGGAGTTAGTAAAACCGGGGG
CACGACTTACTCGTCATACGACAAAATTAACGGGAATTACAAAGAAAGATTTAATTGGTGTCGAGAAATTCCCGCAAATT
ATAGAAAAATTTATTCGGTTTATCGGAGAAGATTCTATATTTGTTACATGGGGAAAAGAAGATTATCGATTTCTATCTCA
TGATTGTACGTTACATAGTGTAGAATGCCCTTGTATGGAAAAAGAAAGAAGAATTGATTTACAAAAATTTGTTTTTCAAG
CGTATGAAGAATTGTTTGAGCATACACCAAGTTTACAATCTGCAGTAGAACAGCTCGGTTTAATATGGGAAGGGAAGCAG
CACCGAGCTTTAGCGGATGCTGAGAATACAGCGAACATACTTCTTAAAGCATATAGCGAGAGAGATATTACTAAAAGGTA
TAAAAGACATGGTGAACTCGAGCTTGTAAAGGACGGAAAATTAACAGAAAAAGCGAAAAAAAAGATGCGAAAATGGGTAT
TTAAAGAAATGAGAAAAAATACAGAGCGTCCTTTCGCTTGGAGTACATTTGAAAGTAGTGACACGTGGGAAAGTATAACG
GAAAGATATTATATAAGTGAATCTACAATAGAACTACTGAAAAAGCATTTTCGTACGGCGGTTAGAAAGGCGGAAAGGCA
GATTAGGTATTTGGCTGAGATGGAGAAAGTAGTAGAAAAAAATTAA

Upstream 100 bases:

>100_bases
CATTTTTTAGACGAAGTATTACATGCATAAAGTGTACGAATAAATAAATACTGAAAATAAAGTATGTGTGTGAAAAGGAA
TGTAGAAAGAGGTAAATAAA

Downstream 100 bases:

>100_bases
TGACATAGTCTATTTTATTCATATGTACAACTAGACTTCAGGATTAAGTTGCTGAAGTTTAGTTGAGAAATTCATGGTTT
GTCCTGTATTATGAATGAAA

Product: exonuclease

Products: NA

Alternate protein names: Exonuclease Family Protein; Exonuclease RNAse T And DNA Polymerase III; DNA Polymerase III Alpha Subunit; Inhibitor Of KinA Pathway Sporulation Exonuclease; DNA Polymerase III Alpha Subunit Gram-Positive Type; DNA Polymerase III PolC-Type; DNA-Directed DNA Polymerase III Alpha Subunit

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MENATHFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPGARLTRHTTKLTGITKKDLIGVEKFPQI
IEKFIRFIGEDSIFVTWGKEDYRFLSHDCTLHSVECPCMEKERRIDLQKFVFQAYEELFEHTPSLQSAVEQLGLIWEGKQ
HRALADAENTANILLKAYSERDITKRYKRHGELELVKDGKLTEKAKKKMRKWVFKEMRKNTERPFAWSTFESSDTWESIT
ERYYISESTIELLKKHFRTAVRKAERQIRYLAEMEKVVEKN

Sequences:

>Translated_281_residues
MENATHFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPGARLTRHTTKLTGITKKDLIGVEKFPQI
IEKFIRFIGEDSIFVTWGKEDYRFLSHDCTLHSVECPCMEKERRIDLQKFVFQAYEELFEHTPSLQSAVEQLGLIWEGKQ
HRALADAENTANILLKAYSERDITKRYKRHGELELVKDGKLTEKAKKKMRKWVFKEMRKNTERPFAWSTFESSDTWESIT
ERYYISESTIELLKKHFRTAVRKAERQIRYLAEMEKVVEKN
>Mature_281_residues
MENATHFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPGARLTRHTTKLTGITKKDLIGVEKFPQI
IEKFIRFIGEDSIFVTWGKEDYRFLSHDCTLHSVECPCMEKERRIDLQKFVFQAYEELFEHTPSLQSAVEQLGLIWEGKQ
HRALADAENTANILLKAYSERDITKRYKRHGELELVKDGKLTEKAKKKMRKWVFKEMRKNTERPFAWSTFESSDTWESIT
ERYYISESTIELLKKHFRTAVRKAERQIRYLAEMEKVVEKN

Specific function: Unknown

COG id: COG2176

COG function: function code L; DNA polymerase III, alpha subunit (gram-positive type)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33139; Mature: 33139

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENATHFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPGARLTRHT
CCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHEEEEHHHHHHHHHHHHHHCCCHHHHHHH
TKLTGITKKDLIGVEKFPQIIEKFIRFIGEDSIFVTWGKEDYRFLSHDCTLHSVECPCME
HHHHCCCHHHHHCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCEEEECCCCCCC
KERRIDLQKFVFQAYEELFEHTPSLQSAVEQLGLIWEGKQHRALADAENTANILLKAYSE
HHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHH
RDITKRYKRHGELELVKDGKLTEKAKKKMRKWVFKEMRKNTERPFAWSTFESSDTWESIT
HHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHH
ERYYISESTIELLKKHFRTAVRKAERQIRYLAEMEKVVEKN
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MENATHFIVFDIERNFRPYKSEDPSEIVDIGAVKIEASTMKVIGEFSELVKPGARLTRHT
CCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHEEEEHHHHHHHHHHHHHHCCCHHHHHHH
TKLTGITKKDLIGVEKFPQIIEKFIRFIGEDSIFVTWGKEDYRFLSHDCTLHSVECPCME
HHHHCCCHHHHHCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCEEEECCCCCCC
KERRIDLQKFVFQAYEELFEHTPSLQSAVEQLGLIWEGKQHRALADAENTANILLKAYSE
HHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHH
RDITKRYKRHGELELVKDGKLTEKAKKKMRKWVFKEMRKNTERPFAWSTFESSDTWESIT
HHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHH
ERYYISESTIELLKKHFRTAVRKAERQIRYLAEMEKVVEKN
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA