Click here to switch to the map view.

The map label for this gene is yhiD [H]

Identifier: 118478781

GI number: 118478781

Start: 3358690

End: 3359367

Strand: Reverse

Name: yhiD [H]

Synonym: BALH_3173

Alternate gene names: 118478781

Gene position: 3359367-3358690 (Counterclockwise)

Preceding gene: 118478783

Following gene: 118478780

Centisome position: 63.9

GC content: 35.99

Gene sequence:

>678_bases
GTGAGTGTAAATATTGATTTCATTATACGAATCGGTGTTGCTGGTTTGTTAGGAGCAATAATCGGTATTGAAAGGGAAAT
TCGATCAAAAGAAGCGGGCTTAAAAACACATTTCCTAGTAGCGGTAGGAAGTGCTTTAATAATGGTCGTTTCGAAATATG
CTTTTTCAGATATTATGAATGAAGATCATATGGCACTAGATCCGAGTCGTATTGCAGCGCAAGTTGTTAGTGGAGTAGGT
TTTTTAGGTGCAGGTACAATTATTATTCAAAAGCAGGCGGTGAAAGGATTAACGACAGCAGCTGGTTTATGGGCTACAGC
AGGAATTGGATTAGCAATTGGGGCTGGTATGTATGTAGTAGGAATTGGAGCGACGATTCTCGTTTTAATTGGTTTAGAGA
TTGTAAGCCGTATTTTTAAGGTGCAATTTTTATTTCCGCAAAATATAACGGTGCAAATGTGTATAAATAAACATGAAGCA
GTACAACAAATATTAGAAACACTACAAGTGAAAGGCATTCCAATACTTTCATATGAAGTGGAAACTTCACAGCAAGGTAC
AGAAATAGTTTATAAGGTAGGGATGCAACTGAAAAACATATCGTCAGAAGAAAAGAATGAGTTTATTCAGCATATGCAAA
CATTACCAGAAGTTACATTCATAAAGTTAAAATCATAG

Upstream 100 bases:

>100_bases
TATTAAGTATATTTTAGTAAAATTCCTTCATATCGATAAATGGATGTATGTGATAATTTTTATTTTATCTATCTATAATG
AATGAAAGGGGGAAGGGCTC

Downstream 100 bases:

>100_bases
TTTTGAAAACGAGGATAGATGTAGTGGGAATTTCGCTATTATCTATCTTTTTTTGATATAAAACGCACATAAAGTCAAGT
GTTAATTTTGCATGGTATGG

Product: MgtC/SapB family membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MSVNIDFIIRIGVAGLLGAIIGIEREIRSKEAGLKTHFLVAVGSALIMVVSKYAFSDIMNEDHMALDPSRIAAQVVSGVG
FLGAGTIIIQKQAVKGLTTAAGLWATAGIGLAIGAGMYVVGIGATILVLIGLEIVSRIFKVQFLFPQNITVQMCINKHEA
VQQILETLQVKGIPILSYEVETSQQGTEIVYKVGMQLKNISSEEKNEFIQHMQTLPEVTFIKLKS

Sequences:

>Translated_225_residues
MSVNIDFIIRIGVAGLLGAIIGIEREIRSKEAGLKTHFLVAVGSALIMVVSKYAFSDIMNEDHMALDPSRIAAQVVSGVG
FLGAGTIIIQKQAVKGLTTAAGLWATAGIGLAIGAGMYVVGIGATILVLIGLEIVSRIFKVQFLFPQNITVQMCINKHEA
VQQILETLQVKGIPILSYEVETSQQGTEIVYKVGMQLKNISSEEKNEFIQHMQTLPEVTFIKLKS
>Mature_224_residues
SVNIDFIIRIGVAGLLGAIIGIEREIRSKEAGLKTHFLVAVGSALIMVVSKYAFSDIMNEDHMALDPSRIAAQVVSGVGF
LGAGTIIIQKQAVKGLTTAAGLWATAGIGLAIGAGMYVVGIGATILVLIGLEIVSRIFKVQFLFPQNITVQMCINKHEAV
QQILETLQVKGIPILSYEVETSQQGTEIVYKVGMQLKNISSEEKNEFIQHMQTLPEVTFIKLKS

Specific function: Unknown

COG id: COG1285

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MgtC/SapB family [H]

Homologues:

Organism=Escherichia coli, GI1789924, Length=151, Percent_Identity=49.6688741721854, Blast_Score=154, Evalue=5e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003416 [H]

Pfam domain/function: PF02308 MgtC [H]

EC number: NA

Molecular weight: Translated: 24255; Mature: 24124

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVNIDFIIRIGVAGLLGAIIGIEREIRSKEAGLKTHFLVAVGSALIMVVSKYAFSDIMN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
EDHMALDPSRIAAQVVSGVGFLGAGTIIIQKQAVKGLTTAAGLWATAGIGLAIGAGMYVV
CCCCCCCHHHHHHHHHHCCCHHCCCEEEEEHHHHHHHHHHHHHHHHHCHHHHHHCCHHHH
GIGATILVLIGLEIVSRIFKVQFLFPQNITVQMCINKHEAVQQILETLQVKGIPILSYEV
HHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEECCHHHHHHHHHHHHHHCCCEEEEEEE
ETSQQGTEIVYKVGMQLKNISSEEKNEFIQHMQTLPEVTFIKLKS
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECC
>Mature Secondary Structure 
SVNIDFIIRIGVAGLLGAIIGIEREIRSKEAGLKTHFLVAVGSALIMVVSKYAFSDIMN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
EDHMALDPSRIAAQVVSGVGFLGAGTIIIQKQAVKGLTTAAGLWATAGIGLAIGAGMYVV
CCCCCCCHHHHHHHHHHCCCHHCCCEEEEEHHHHHHHHHHHHHHHHHCHHHHHHCCHHHH
GIGATILVLIGLEIVSRIFKVQFLFPQNITVQMCINKHEAVQQILETLQVKGIPILSYEV
HHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEECCHHHHHHHHHHHHHHCCCEEEEEEE
ETSQQGTEIVYKVGMQLKNISSEEKNEFIQHMQTLPEVTFIKLKS
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]