Definition Bacillus thuringiensis str. Al Hakam chromosome, complete genome.
Accession NC_008600
Length 5,257,091

Click here to switch to the map view.

The map label for this gene is yvdQ [H]

Identifier: 118478424

GI number: 118478424

Start: 2950478

End: 2951107

Strand: Reverse

Name: yvdQ [H]

Synonym: BALH_2792

Alternate gene names: 118478424

Gene position: 2951107-2950478 (Counterclockwise)

Preceding gene: 118478425

Following gene: 118478422

Centisome position: 56.14

GC content: 35.87

Gene sequence:

>630_bases
GTGTTTTCCATGCATAGTAGAAAAGCTTTTGCAGGAAAAAGCATACTTAAAAATTTGATTTCAATATTAAAATCAATATT
TATTATTATATTTTCGAAAGGGAGGAATTTAAAAATGGGTATATTAAGTGGAAATCCTCAAAATGAACCGTTACATTACG
GAGAAGTATTTGATATTTGGAGTTATCTTCTAGCTGCACAAGGTGCAATCGCAAGTCATCAAGTATTTATGAATCACACA
GGTGATGAAGACTTGAAGAAGTTTTTAGAAAGCTTAATTGAAAATGATATGAATTCGGAAATAGAAGAGTTAAAAACTCT
TTTAAAGGTTAATGGTGTAGCTTTACCGCCTGCTCCGCCAGAACGACCAGTTGCATCTATCGAAGACATTCCTCCAGGAG
CGCGTATTAATGATGCAGAAATTGCAGCAGCTGTTTCTACAGGATTAGCAGCTGGACTTGTGACATGTAGCCAGGTAATG
GGAAAATGCCTTCGAGAAGATGTAGGCATGCTATTTGGACAATTTCATATGAAAAAAGCGCAAGCAGGTGTAACTTTGCT
ACGTTTAAGTAAGAAAAAAGGATGGGTAGTTCCACCTCCATTACATGTAAGAAATTCAGATCAAGCTTAA

Upstream 100 bases:

>100_bases
GAATTCTCACTCAAAGATTATTGATAATCTTCTTTCATAATCTTTGGGTATTTTATTTGTAAACTACTTTCCTAAACAAT
AAACACGCAGTGTTGGAAAG

Downstream 100 bases:

>100_bases
TAAACAAAAATAAAAAAGTGGCGTTGGCCACTTTTTTATTTTTTAGATGTATCCTCAAGCTTGGATTTATTTATTGTGGA
AGAATCTATATATTCATCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MFSMHSRKAFAGKSILKNLISILKSIFIIIFSKGRNLKMGILSGNPQNEPLHYGEVFDIWSYLLAAQGAIASHQVFMNHT
GDEDLKKFLESLIENDMNSEIEELKTLLKVNGVALPPAPPERPVASIEDIPPGARINDAEIAAAVSTGLAAGLVTCSQVM
GKCLREDVGMLFGQFHMKKAQAGVTLLRLSKKKGWVVPPPLHVRNSDQA

Sequences:

>Translated_209_residues
MFSMHSRKAFAGKSILKNLISILKSIFIIIFSKGRNLKMGILSGNPQNEPLHYGEVFDIWSYLLAAQGAIASHQVFMNHT
GDEDLKKFLESLIENDMNSEIEELKTLLKVNGVALPPAPPERPVASIEDIPPGARINDAEIAAAVSTGLAAGLVTCSQVM
GKCLREDVGMLFGQFHMKKAQAGVTLLRLSKKKGWVVPPPLHVRNSDQA
>Mature_209_residues
MFSMHSRKAFAGKSILKNLISILKSIFIIIFSKGRNLKMGILSGNPQNEPLHYGEVFDIWSYLLAAQGAIASHQVFMNHT
GDEDLKKFLESLIENDMNSEIEELKTLLKVNGVALPPAPPERPVASIEDIPPGARINDAEIAAAVSTGLAAGLVTCSQVM
GKCLREDVGMLFGQFHMKKAQAGVTLLRLSKKKGWVVPPPLHVRNSDQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021617
- InterPro:   IPR012347 [H]

Pfam domain/function: PF11553 DUF3231 [H]

EC number: NA

Molecular weight: Translated: 22802; Mature: 22802

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSMHSRKAFAGKSILKNLISILKSIFIIIFSKGRNLKMGILSGNPQNEPLHYGEVFDIW
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHH
SYLLAAQGAIASHQVFMNHTGDEDLKKFLESLIENDMNSEIEELKTLLKVNGVALPPAPP
HHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEECCCCCC
ERPVASIEDIPPGARINDAEIAAAVSTGLAAGLVTCSQVMGKCLREDVGMLFGQFHMKKA
CCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAGVTLLRLSKKKGWVVPPPLHVRNSDQA
HHCHHHEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFSMHSRKAFAGKSILKNLISILKSIFIIIFSKGRNLKMGILSGNPQNEPLHYGEVFDIW
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHH
SYLLAAQGAIASHQVFMNHTGDEDLKKFLESLIENDMNSEIEELKTLLKVNGVALPPAPP
HHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEECCCCCC
ERPVASIEDIPPGARINDAEIAAAVSTGLAAGLVTCSQVMGKCLREDVGMLFGQFHMKKA
CCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAGVTLLRLSKKKGWVVPPPLHVRNSDQA
HHCHHHEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]