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The map label for this gene is ybgL [C]

Identifier: 118478395

GI number: 118478395

Start: 2922565

End: 2923344

Strand: Reverse

Name: ybgL [C]

Synonym: BALH_2760

Alternate gene names: 118478395

Gene position: 2923344-2922565 (Counterclockwise)

Preceding gene: 118478396

Following gene: 118478394

Centisome position: 55.61

GC content: 39.36

Gene sequence:

>780_bases
GTGGAGGAGGGAAATATCATGACTACAATTGATTTGAATTGTGATTTAGGAGAAAGTTTTGGCGCTTATAAAATGGGGAA
TGATGATGAAATTCTTCCGTTCGTTTCCTCTATAAACGTTGCATGTGGTTTTCATGCAGGTGATCCGTCCGTTATGCGAC
AAACGGTTGAAAAGGCAATGCAGCATAACGTAGCGATAGGGGCACACCCCGGATTTCCTGATTTAATTGGATTTGGTAGA
AGGAACATGAACGTTTCAGCAAATGAAGTATACGATTATGTTTTATATCAAATTGGTGCATTAGACGCTTTTGTAAAAGC
AGCTGGTGGGAAGATGCAGCATGTGAAACCGCACGGAGCCCTATATAATATGGCGGCAACTAATCCGGAAATTGCAGATG
CAATCGCAAAGGCAATTTATCATATGAATTCAAGTCTATCACTTTACGGATTAGCAAATAGCGAGGCGTTTATACAGGCT
GCGGAAAAATACAATATAACTCTCGTACAAGAAGCTTTTGCAGATCGTACGTATAAGCAAGATGGAACATTAACGAGTCG
TACGGAAGAAAATGCGCTTATAAAAAATGAAGATGAAGCGATAAATCAAGTGCTTCAAATGGTGAAAGAAGGCTATGTAA
ATTCGGTGGATGGTGAGAAAGTAGCAGTTCAGGCGCAGACAATCTGTTTACATGGTGATGGAGAAAAAGCAGTACAATTT
GCGAGAAAAATATACAGAACATTCGAACATAATAAGATTTCTATATGCGCACCGAAATAA

Upstream 100 bases:

>100_bases
ATCGTTTGAGAATATTACGCTTGAAGAAGCGGAACAATTGTACATAGAAAAAGAAGTAAATATGAATCTATTAAAAAAGT
TCATCACTTTACGAAGGTGA

Downstream 100 bases:

>100_bases
AATAATGAGGGGAAGTGTTGGAATTGGTGAAATTAATCGGGATATTACTAGTTGCAGTGGGCTTTTTATTTAGATTAAAT
ACACTATTAGTCGTTATGGT

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MEEGNIMTTIDLNCDLGESFGAYKMGNDDEILPFVSSINVACGFHAGDPSVMRQTVEKAMQHNVAIGAHPGFPDLIGFGR
RNMNVSANEVYDYVLYQIGALDAFVKAAGGKMQHVKPHGALYNMAATNPEIADAIAKAIYHMNSSLSLYGLANSEAFIQA
AEKYNITLVQEAFADRTYKQDGTLTSRTEENALIKNEDEAINQVLQMVKEGYVNSVDGEKVAVQAQTICLHGDGEKAVQF
ARKIYRTFEHNKISICAPK

Sequences:

>Translated_259_residues
MEEGNIMTTIDLNCDLGESFGAYKMGNDDEILPFVSSINVACGFHAGDPSVMRQTVEKAMQHNVAIGAHPGFPDLIGFGR
RNMNVSANEVYDYVLYQIGALDAFVKAAGGKMQHVKPHGALYNMAATNPEIADAIAKAIYHMNSSLSLYGLANSEAFIQA
AEKYNITLVQEAFADRTYKQDGTLTSRTEENALIKNEDEAINQVLQMVKEGYVNSVDGEKVAVQAQTICLHGDGEKAVQF
ARKIYRTFEHNKISICAPK
>Mature_259_residues
MEEGNIMTTIDLNCDLGESFGAYKMGNDDEILPFVSSINVACGFHAGDPSVMRQTVEKAMQHNVAIGAHPGFPDLIGFGR
RNMNVSANEVYDYVLYQIGALDAFVKAAGGKMQHVKPHGALYNMAATNPEIADAIAKAIYHMNSSLSLYGLANSEAFIQA
AEKYNITLVQEAFADRTYKQDGTLTSRTEENALIKNEDEAINQVLQMVKEGYVNSVDGEKVAVQAQTICLHGDGEKAVQF
ARKIYRTFEHNKISICAPK

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=248, Percent_Identity=50.4032258064516, Blast_Score=254, Evalue=3e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 28349; Mature: 28349

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEGNIMTTIDLNCDLGESFGAYKMGNDDEILPFVSSINVACGFHAGDPSVMRQTVEKAM
CCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCCHHHHHHHHHHHH
QHNVAIGAHPGFPDLIGFGRRNMNVSANEVYDYVLYQIGALDAFVKAAGGKMQHVKPHGA
HCCEEEECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
LYNMAATNPEIADAIAKAIYHMNSSLSLYGLANSEAFIQAAEKYNITLVQEAFADRTYKQ
EEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCEEEEHHHHHCCCCCC
DGTLTSRTEENALIKNEDEAINQVLQMVKEGYVNSVDGEKVAVQAQTICLHGDGEKAVQF
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCHHHHHH
ARKIYRTFEHNKISICAPK
HHHHHHHHCCCEEEEECCC
>Mature Secondary Structure
MEEGNIMTTIDLNCDLGESFGAYKMGNDDEILPFVSSINVACGFHAGDPSVMRQTVEKAM
CCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCCHHHHHHHHHHHH
QHNVAIGAHPGFPDLIGFGRRNMNVSANEVYDYVLYQIGALDAFVKAAGGKMQHVKPHGA
HCCEEEECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
LYNMAATNPEIADAIAKAIYHMNSSLSLYGLANSEAFIQAAEKYNITLVQEAFADRTYKQ
EEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCEEEEHHHHHCCCCCC
DGTLTSRTEENALIKNEDEAINQVLQMVKEGYVNSVDGEKVAVQAQTICLHGDGEKAVQF
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCHHHHHH
ARKIYRTFEHNKISICAPK
HHHHHHHHCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA