Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
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Accession | NC_008600 |
Length | 5,257,091 |
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The map label for this gene is ycdQ [C]
Identifier: 118478342
GI number: 118478342
Start: 2869301
End: 2871691
Strand: Reverse
Name: ycdQ [C]
Synonym: BALH_2706
Alternate gene names: 118478342
Gene position: 2871691-2869301 (Counterclockwise)
Preceding gene: 118478343
Following gene: 118478340
Centisome position: 54.63
GC content: 32.25
Gene sequence:
>2391_bases ATGGAAAGGGTGATTAAACTGTTAGACCAGTATAAAATAATTAACATTTCATATGAACAATTATGGCAAATGGATTTTCA AACTACGGAGCCATTTATACTCAAGGTTGATTGGGATAAAGTAACGTATGAATTTTTAATTCGTATTAAGCCCGATGCTG ATAACACAATTGTTTTTGGATCCGGAGCAGGTGGGTTTCAAGAACAGCCAATTGGTCCACCTATTTTTCATCGACATTCT TGGATGGATGAATTTGAAGATACTGTTATATATTATAATGATCCTACTTTATATCTTGGAAAATTATCTTTAGGTTGGGG ACAGGGGGAGTTAAATAGATTTTATTTACAAGATATAGCAAATATTTTAGAAATAGTATTTACAAAGTTAAAAATTGATT CGAAAAATGTGTTGTTTTATGGCAGTTCCGGGGGAGGGTTTATGTCTTTAATTTTAGCTGGATTCGTTAAGGGCTCCACA GCTTTCATTAATAATCCTCAAACAAATTTATTAAAATGGATACCTGTACCAATAAATCTAGTTTTCGATTTGTCTTATCC AGGTTTATCAAGAGAAGAAGTTGAGGAGAAATTTGGGGAAAGAATTAATGTTGTGAAATTTTTTAATCACATTAAATATG TTCCGAATATTTATTTTTTGCAAAATTTCGCGTGTGAATTTGATGTGCAAAATCATTTATTACCATTTATTTCTGAATTA GGGCAACTAGATAAAGACACGGAAGTAAATCAAATTATAATAGACTTATATTTTGATAAAAAAGCAGGGCATGCAGCTGT AGGGAAAAGTGAAACAATTGAATATATAAAAAAAGTAAAGCCTAATCAGACTGTGAAAGAAGAACAAAAAGAAGCAGAGC TATCAGTCGTTATAGTTTTAGGAGAAGAAAAATCGAAGTTGAATCAGATTTTAAATAAATTGCAGCATATAAAACCGATA GAAATTATTATTGTAGCTGATGATAGAATGAGTGCGATACAATCTATACCAACATTTGTTGAAAATAATGTTGTTGTGAT TGAAGAGAAAAATAAATGGAAAGCACCAGTTCATGGGGCGAAAGTTGCCAATGGGGATGTAGTTTTATTTTTAGATGGAG AAGATGTTATTTTTTCGGTAGAATTAGAACGATTTATAGAACCACTACTAAAAAAGGAACAGGATGTAATTTTGAATAAC ATAGACTCTGTCTGTTTTGAAAAGATGAGTGTAGAATGGCCAAGTATTGCTATGGTGTATAGAAAAATAGTAAACGATGT ATTGGGGCGTATGGATTTAAAATATGATTCGATGTTATCTATGCCATATGCTATTACTAAAAAAGCAATTGAAGACATTG GATATGACACTTTGCAAAATCCCGTTCTATCTCAAATAACTCTTATTGAAAAAGGGTGGCGACTACATTCCTCGTCAGCC ATCACTAACACCTCTTTAAATAATATAACCCTAAACAACACCTCTTTCTATAAAAATGAATTAACTAAATTAGAAGTATG TGAGATTAAAGAGAATGTAAAAGCTTTGGAAAGTTGGTTACAACGAAAAGATGATAGAGGGAACTATACAGATGGAGGAA GAAAAAGAGAAGTTATAGAGCAACTAAAAAAACAGAAGAATTATTCACTTTTTCATAAAGGATGGGGAATGAATTCCTCT ATTTATAATGGAAAACAGTTATCAATTATTATACCAGCACAAAATGAAGAAGCAACAATTAAAGAAGTTATTCTTGAGGC AAGAAAAATTGAACCGAAAGAAATAATTGTTGTAATTAATGGATCAACAGATCAAACAGAAGCAATTGCTAAGCAATTAG GAGCTACAGTAATTGTTTATGAAGAAGCATTAGGGCATGATGTAGGACGTGCTATTGGTGCACAAGAAGCCACAGGAGAT ATACTTCTCTTTATTGATGCTGATTTTGCTATTCCAGCAAAAGATCTTCATCCATTAACGAAGGCTGTTGCGGATGGTGT TGATATAGTTTTAAACGATTTAAATTTAAATCTTAGATTTCCTCTATATATTGTAAATTTATATAAATATATGTTGAATA TTGCTTGTAACCGTAAAGATTTAGGGGTAGGATCTACAATTGCTGTTCCTCATGCTATTAGTAGAAAATGTCTAGAGGGG ATCGGCTGGGACACTCTTCACACAGCGTGCGTTGCACAAGTAAAGGCAATATTAGAAGGGTATAAAGTCGAATGTGTCCA TTTTGTAGATGTAATGAAACCAAATCGTATTCGTCCAAATGAGCACTTTGCAACAGTAGGACATCCACCAGCTGTATTGA GAATTACTGGGGATCATTTAGAAGGACTTTCATATTTATTGAAGCATAGGGATTTTAAAGATTTATTTTAA
Upstream 100 bases:
>100_bases AAGGAAAATGTAAGTCAAAATGGACATCCTCCAGCAGTATTAAGAATAATTGGTGATCATGTTGAAGCGCTCTCTTATTT GATAGAACAACTCGAAATGG
Downstream 100 bases:
>100_bases AAGGTAAATTTGTCTATTGATTGAGTAATGTAAACATTTCATTTAAGAACTTGACGATATTTAGTATTGCAATGAAACTA AATCAAAAGTTTTTATTATT
Product: glycosyl transferase, group 2 family protein
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Glycosyltransferase Involved In Cell Wall Biogenesis; Glycosyltransferase/Glycosyltransferase; Glycosyltransferase; Cell Wall Biosynthesis Glycosyltransferase; Family 2 Glycosyl Transferase; Glycosyl Transferase Domain-Containing Protein
Number of amino acids: Translated: 796; Mature: 796
Protein sequence:
>796_residues MERVIKLLDQYKIINISYEQLWQMDFQTTEPFILKVDWDKVTYEFLIRIKPDADNTIVFGSGAGGFQEQPIGPPIFHRHS WMDEFEDTVIYYNDPTLYLGKLSLGWGQGELNRFYLQDIANILEIVFTKLKIDSKNVLFYGSSGGGFMSLILAGFVKGST AFINNPQTNLLKWIPVPINLVFDLSYPGLSREEVEEKFGERINVVKFFNHIKYVPNIYFLQNFACEFDVQNHLLPFISEL GQLDKDTEVNQIIIDLYFDKKAGHAAVGKSETIEYIKKVKPNQTVKEEQKEAELSVVIVLGEEKSKLNQILNKLQHIKPI EIIIVADDRMSAIQSIPTFVENNVVVIEEKNKWKAPVHGAKVANGDVVLFLDGEDVIFSVELERFIEPLLKKEQDVILNN IDSVCFEKMSVEWPSIAMVYRKIVNDVLGRMDLKYDSMLSMPYAITKKAIEDIGYDTLQNPVLSQITLIEKGWRLHSSSA ITNTSLNNITLNNTSFYKNELTKLEVCEIKENVKALESWLQRKDDRGNYTDGGRKREVIEQLKKQKNYSLFHKGWGMNSS IYNGKQLSIIIPAQNEEATIKEVILEARKIEPKEIIVVINGSTDQTEAIAKQLGATVIVYEEALGHDVGRAIGAQEATGD ILLFIDADFAIPAKDLHPLTKAVADGVDIVLNDLNLNLRFPLYIVNLYKYMLNIACNRKDLGVGSTIAVPHAISRKCLEG IGWDTLHTACVAQVKAILEGYKVECVHFVDVMKPNRIRPNEHFATVGHPPAVLRITGDHLEGLSYLLKHRDFKDLF
Sequences:
>Translated_796_residues MERVIKLLDQYKIINISYEQLWQMDFQTTEPFILKVDWDKVTYEFLIRIKPDADNTIVFGSGAGGFQEQPIGPPIFHRHS WMDEFEDTVIYYNDPTLYLGKLSLGWGQGELNRFYLQDIANILEIVFTKLKIDSKNVLFYGSSGGGFMSLILAGFVKGST AFINNPQTNLLKWIPVPINLVFDLSYPGLSREEVEEKFGERINVVKFFNHIKYVPNIYFLQNFACEFDVQNHLLPFISEL GQLDKDTEVNQIIIDLYFDKKAGHAAVGKSETIEYIKKVKPNQTVKEEQKEAELSVVIVLGEEKSKLNQILNKLQHIKPI EIIIVADDRMSAIQSIPTFVENNVVVIEEKNKWKAPVHGAKVANGDVVLFLDGEDVIFSVELERFIEPLLKKEQDVILNN IDSVCFEKMSVEWPSIAMVYRKIVNDVLGRMDLKYDSMLSMPYAITKKAIEDIGYDTLQNPVLSQITLIEKGWRLHSSSA ITNTSLNNITLNNTSFYKNELTKLEVCEIKENVKALESWLQRKDDRGNYTDGGRKREVIEQLKKQKNYSLFHKGWGMNSS IYNGKQLSIIIPAQNEEATIKEVILEARKIEPKEIIVVINGSTDQTEAIAKQLGATVIVYEEALGHDVGRAIGAQEATGD ILLFIDADFAIPAKDLHPLTKAVADGVDIVLNDLNLNLRFPLYIVNLYKYMLNIACNRKDLGVGSTIAVPHAISRKCLEG IGWDTLHTACVAQVKAILEGYKVECVHFVDVMKPNRIRPNEHFATVGHPPAVLRITGDHLEGLSYLLKHRDFKDLF >Mature_796_residues MERVIKLLDQYKIINISYEQLWQMDFQTTEPFILKVDWDKVTYEFLIRIKPDADNTIVFGSGAGGFQEQPIGPPIFHRHS WMDEFEDTVIYYNDPTLYLGKLSLGWGQGELNRFYLQDIANILEIVFTKLKIDSKNVLFYGSSGGGFMSLILAGFVKGST AFINNPQTNLLKWIPVPINLVFDLSYPGLSREEVEEKFGERINVVKFFNHIKYVPNIYFLQNFACEFDVQNHLLPFISEL GQLDKDTEVNQIIIDLYFDKKAGHAAVGKSETIEYIKKVKPNQTVKEEQKEAELSVVIVLGEEKSKLNQILNKLQHIKPI EIIIVADDRMSAIQSIPTFVENNVVVIEEKNKWKAPVHGAKVANGDVVLFLDGEDVIFSVELERFIEPLLKKEQDVILNN IDSVCFEKMSVEWPSIAMVYRKIVNDVLGRMDLKYDSMLSMPYAITKKAIEDIGYDTLQNPVLSQITLIEKGWRLHSSSA ITNTSLNNITLNNTSFYKNELTKLEVCEIKENVKALESWLQRKDDRGNYTDGGRKREVIEQLKKQKNYSLFHKGWGMNSS IYNGKQLSIIIPAQNEEATIKEVILEARKIEPKEIIVVINGSTDQTEAIAKQLGATVIVYEEALGHDVGRAIGAQEATGD ILLFIDADFAIPAKDLHPLTKAVADGVDIVLNDLNLNLRFPLYIVNLYKYMLNIACNRKDLGVGSTIAVPHAISRKCLEG IGWDTLHTACVAQVKAILEGYKVECVHFVDVMKPNRIRPNEHFATVGHPPAVLRITGDHLEGLSYLLKHRDFKDLF
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90348; Mature: 90348
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERVIKLLDQYKIINISYEQLWQMDFQTTEPFILKVDWDKVTYEFLIRIKPDADNTIVFG CHHHHHHHHCEEEEEECHHHHHHCCCCCCCCEEEEEECCCEEEEEEEEEECCCCCEEEEE SGAGGFQEQPIGPPIFHRHSWMDEFEDTVIYYNDPTLYLGKLSLGWGQGELNRFYLQDIA CCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHH NILEIVFTKLKIDSKNVLFYGSSGGGFMSLILAGFVKGSTAFINNPQTNLLKWIPVPINL HHHHHHHHHHEECCCEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCCEEEEECCCEEE VFDLSYPGLSREEVEEKFGERINVVKFFNHIKYVPNIYFLQNFACEFDVQNHLLPFISEL EEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCEEECCHHHHHHHHHHH GQLDKDTEVNQIIIDLYFDKKAGHAAVGKSETIEYIKKVKPNQTVKEEQKEAELSVVIVL HCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCEEEEEEE GEEKSKLNQILNKLQHIKPIEIIIVADDRMSAIQSIPTFVENNVVVIEEKNKWKAPVHGA CCCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC KVANGDVVLFLDGEDVIFSVELERFIEPLLKKEQDVILNNIDSVCFEKMSVEWPSIAMVY EECCCCEEEEECCCCEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH RKIVNDVLGRMDLKYDSMLSMPYAITKKAIEDIGYDTLQNPVLSQITLIEKGWRLHSSSA HHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHCCHHHHCCHHHHHHHHHHCCCEEECCCC ITNTSLNNITLNNTSFYKNELTKLEVCEIKENVKALESWLQRKDDRGNYTDGGRKREVIE EECCCCCEEEECCCCHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH QLKKQKNYSLFHKGWGMNSSIYNGKQLSIIIPAQNEEATIKEVILEARKIEPKEIIVVIN HHHHCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEE GSTDQTEAIAKQLGATVIVYEEALGHDVGRAIGAQEATGDILLFIDADFAIPAKDLHPLT CCCCHHHHHHHHHCCEEEEEEHHHCCHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHH KAVADGVDIVLNDLNLNLRFPLYIVNLYKYMLNIACNRKDLGVGSTIAVPHAISRKCLEG HHHHCCCEEEEEECCCEEECHHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHC IGWDTLHTACVAQVKAILEGYKVECVHFVDVMKPNRIRPNEHFATVGHPPAVLRITGDHL CCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCEEECCCCCEEEEEECCHH EGLSYLLKHRDFKDLF HHHHHHHHCCCHHHCC >Mature Secondary Structure MERVIKLLDQYKIINISYEQLWQMDFQTTEPFILKVDWDKVTYEFLIRIKPDADNTIVFG CHHHHHHHHCEEEEEECHHHHHHCCCCCCCCEEEEEECCCEEEEEEEEEECCCCCEEEEE SGAGGFQEQPIGPPIFHRHSWMDEFEDTVIYYNDPTLYLGKLSLGWGQGELNRFYLQDIA CCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHH NILEIVFTKLKIDSKNVLFYGSSGGGFMSLILAGFVKGSTAFINNPQTNLLKWIPVPINL HHHHHHHHHHEECCCEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCCEEEEECCCEEE VFDLSYPGLSREEVEEKFGERINVVKFFNHIKYVPNIYFLQNFACEFDVQNHLLPFISEL EEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCEEECCHHHHHHHHHHH GQLDKDTEVNQIIIDLYFDKKAGHAAVGKSETIEYIKKVKPNQTVKEEQKEAELSVVIVL HCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCEEEEEEE GEEKSKLNQILNKLQHIKPIEIIIVADDRMSAIQSIPTFVENNVVVIEEKNKWKAPVHGA CCCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC KVANGDVVLFLDGEDVIFSVELERFIEPLLKKEQDVILNNIDSVCFEKMSVEWPSIAMVY EECCCCEEEEECCCCEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH RKIVNDVLGRMDLKYDSMLSMPYAITKKAIEDIGYDTLQNPVLSQITLIEKGWRLHSSSA HHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHCCHHHHCCHHHHHHHHHHCCCEEECCCC ITNTSLNNITLNNTSFYKNELTKLEVCEIKENVKALESWLQRKDDRGNYTDGGRKREVIE EECCCCCEEEECCCCHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH QLKKQKNYSLFHKGWGMNSSIYNGKQLSIIIPAQNEEATIKEVILEARKIEPKEIIVVIN HHHHCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEE GSTDQTEAIAKQLGATVIVYEEALGHDVGRAIGAQEATGDILLFIDADFAIPAKDLHPLT CCCCHHHHHHHHHCCEEEEEEHHHCCHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHH KAVADGVDIVLNDLNLNLRFPLYIVNLYKYMLNIACNRKDLGVGSTIAVPHAISRKCLEG HHHHCCCEEEEEECCCEEECHHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHC IGWDTLHTACVAQVKAILEGYKVECVHFVDVMKPNRIRPNEHFATVGHPPAVLRITGDHL CCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCEEECCCCCEEEEEECCHH EGLSYLLKHRDFKDLF HHHHHHHHCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA