| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is yvqJ [H]
Identifier: 118478311
GI number: 118478311
Start: 2835901
End: 2837121
Strand: Reverse
Name: yvqJ [H]
Synonym: BALH_2674
Alternate gene names: 118478311
Gene position: 2837121-2835901 (Counterclockwise)
Preceding gene: 118478312
Following gene: 118478310
Centisome position: 53.97
GC content: 36.69
Gene sequence:
>1221_bases ATGAAATTGAAAAATGTATTGAAAAATCGTTCGTTCTTTTTTATGTGGATTGGTAGTGCAATCTCAGAATTAGGAGGGGG TTTCGGCACGTTATGTAATTCAATTCTAGTATATGAGTTAACAGGATCGGAAATGGCTTTAAGTAGTATGTGGCTATTAT ATTTCATCCCATCACTCATACTGCAATTAATCAGTGGCCCATTTATTGATAAATGGAGTCGGAAGTGGATTATGATTTTT TCACAATGGATACGAGCGTCCGTATTCTTATTACCTTTGATAATGTTAGTTTCCGGTAGTTTAGAAGTTTGGCACATTTA TGTTGTTCAGATTGTAGTAGGACTTATTACACCACTTTATACACCTGCAAGTCAAGCAATTACACCGAGCATTGTAAGGA AAGAACAACTTCAAGATGCAAATGCGTACATTGATGGAATGACTCGTCTTATGATGTTTCTTGCGCCAGTATTAGGCGGA GTAGTCATTCATTTGATTGGCACAGAACTTGCGTTATCTTTCGTATGCATTTGTTTATTTGTTAGTGGCACTTTCTTACT TTATATAAAAGAAAATAGAGCGTCGCAACCTATTCGGAAAACGTGGCTAGAACAGTTTCTTCACGGTTTTACATATTTTT TCACAAAACCAATCATCGTTTGGCTCGGTATATTTCTTACTTTCGTACAATTTGGAGTAGGAGTAACAATGGTCACAAAC CTTCCTTATATAAAGGGTGAGCTGTCAGCGGGATATGCGGAATTTGGTTATTTTATGGCCGGATTCCCATTTGGCTATGT AGTTGGATCTATACTAGTCGGAAAAGTAACATATAAAAGTCGGCGTATACTTATGCTTGGAGGATTGTTTATAGGGGGGC TCACATACATTTCGCTAGGGTTCAATCATAGTATTATCATTGCAATAATAGTTGAAGTAATAGCAGGGATTTGTATTGCA TTTTTCAATGTTCATAACACAACGATATGCCAGCAATCAGTCCAAAACAATATGATAGGACAAGTATTTTCAGTGCGATT ATTTTTCATACGATCCGCTATGCCGTCAGGTGTATTAGTAGGAGGAATATTGAGTGAAATGTGGGGAGTAAGAGCGCTAT ATTTAATCATCGGTGCAATTATATGTGTCACCTCTTTAATAGGAATGTTACTTCCGTATTTCAAGTTTTTAGATGAGGCG ATAGAAGAGAAAACAGCTTGA
Upstream 100 bases:
>100_bases AGCAGTACAGTCTTTAGCGAAAGAATTAGATATGTTTTTGAATAGATAATTAACAACGAGAATGTACATAAAGGGAGGAA TATAAAAGAAAAGTTGGTGT
Downstream 100 bases:
>100_bases TTCAAAAAATTTAAACTTTATAATTGAAAATAATTATCATAATCAACTATAATAGAAGAATAGTAGTATTCGTATTACAA AGAGGGAGTGGGATATATGT
Product: macrolide efflux protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MKLKNVLKNRSFFFMWIGSAISELGGGFGTLCNSILVYELTGSEMALSSMWLLYFIPSLILQLISGPFIDKWSRKWIMIF SQWIRASVFLLPLIMLVSGSLEVWHIYVVQIVVGLITPLYTPASQAITPSIVRKEQLQDANAYIDGMTRLMMFLAPVLGG VVIHLIGTELALSFVCICLFVSGTFLLYIKENRASQPIRKTWLEQFLHGFTYFFTKPIIVWLGIFLTFVQFGVGVTMVTN LPYIKGELSAGYAEFGYFMAGFPFGYVVGSILVGKVTYKSRRILMLGGLFIGGLTYISLGFNHSIIIAIIVEVIAGICIA FFNVHNTTICQQSVQNNMIGQVFSVRLFFIRSAMPSGVLVGGILSEMWGVRALYLIIGAIICVTSLIGMLLPYFKFLDEA IEEKTA
Sequences:
>Translated_406_residues MKLKNVLKNRSFFFMWIGSAISELGGGFGTLCNSILVYELTGSEMALSSMWLLYFIPSLILQLISGPFIDKWSRKWIMIF SQWIRASVFLLPLIMLVSGSLEVWHIYVVQIVVGLITPLYTPASQAITPSIVRKEQLQDANAYIDGMTRLMMFLAPVLGG VVIHLIGTELALSFVCICLFVSGTFLLYIKENRASQPIRKTWLEQFLHGFTYFFTKPIIVWLGIFLTFVQFGVGVTMVTN LPYIKGELSAGYAEFGYFMAGFPFGYVVGSILVGKVTYKSRRILMLGGLFIGGLTYISLGFNHSIIIAIIVEVIAGICIA FFNVHNTTICQQSVQNNMIGQVFSVRLFFIRSAMPSGVLVGGILSEMWGVRALYLIIGAIICVTSLIGMLLPYFKFLDEA IEEKTA >Mature_406_residues MKLKNVLKNRSFFFMWIGSAISELGGGFGTLCNSILVYELTGSEMALSSMWLLYFIPSLILQLISGPFIDKWSRKWIMIF SQWIRASVFLLPLIMLVSGSLEVWHIYVVQIVVGLITPLYTPASQAITPSIVRKEQLQDANAYIDGMTRLMMFLAPVLGG VVIHLIGTELALSFVCICLFVSGTFLLYIKENRASQPIRKTWLEQFLHGFTYFFTKPIIVWLGIFLTFVQFGVGVTMVTN LPYIKGELSAGYAEFGYFMAGFPFGYVVGSILVGKVTYKSRRILMLGGLFIGGLTYISLGFNHSIIIAIIVEVIAGICIA FFNVHNTTICQQSVQNNMIGQVFSVRLFFIRSAMPSGVLVGGILSEMWGVRALYLIIGAIICVTSLIGMLLPYFKFLDEA IEEKTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45260; Mature: 45260
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKNVLKNRSFFFMWIGSAISELGGGFGTLCNSILVYELTGSEMALSSMWLLYFIPSLI CCCHHHHCCCCEEEEEHHHHHHHHCCCHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHH LQLISGPFIDKWSRKWIMIFSQWIRASVFLLPLIMLVSGSLEVWHIYVVQIVVGLITPLY HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC TPASQAITPSIVRKEQLQDANAYIDGMTRLMMFLAPVLGGVVIHLIGTELALSFVCICLF CCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSGTFLLYIKENRASQPIRKTWLEQFLHGFTYFFTKPIIVWLGIFLTFVQFGVGVTMVTN HCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC LPYIKGELSAGYAEFGYFMAGFPFGYVVGSILVGKVTYKSRRILMLGGLFIGGLTYISLG CCCCCCHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCC FNHSIIIAIIVEVIAGICIAFFNVHNTTICQQSVQNNMIGQVFSVRLFFIRSAMPSGVLV CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH GGILSEMWGVRALYLIIGAIICVTSLIGMLLPYFKFLDEAIEEKTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKLKNVLKNRSFFFMWIGSAISELGGGFGTLCNSILVYELTGSEMALSSMWLLYFIPSLI CCCHHHHCCCCEEEEEHHHHHHHHCCCHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHH LQLISGPFIDKWSRKWIMIFSQWIRASVFLLPLIMLVSGSLEVWHIYVVQIVVGLITPLY HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC TPASQAITPSIVRKEQLQDANAYIDGMTRLMMFLAPVLGGVVIHLIGTELALSFVCICLF CCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSGTFLLYIKENRASQPIRKTWLEQFLHGFTYFFTKPIIVWLGIFLTFVQFGVGVTMVTN HCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC LPYIKGELSAGYAEFGYFMAGFPFGYVVGSILVGKVTYKSRRILMLGGLFIGGLTYISLG CCCCCCHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCC FNHSIIIAIIVEVIAGICIAFFNVHNTTICQQSVQNNMIGQVFSVRLFFIRSAMPSGVLV CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH GGILSEMWGVRALYLIIGAIICVTSLIGMLLPYFKFLDEAIEEKTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377 [H]