Click here to switch to the map view.

The map label for this gene is yobV [H]

Identifier: 118478043

GI number: 118478043

Start: 2569015

End: 2569977

Strand: Direct

Name: yobV [H]

Synonym: BALH_2395

Alternate gene names: 118478043

Gene position: 2569015-2569977 (Clockwise)

Preceding gene: 118478042

Following gene: 118478044

Centisome position: 48.87

GC content: 31.15

Gene sequence:

>963_bases
ATGCCTAAAATTGACAATATGCTAGCAATTCTATGGATGCTTCGTTCAGGTGAAAAAATTACTGCAAAACAAATTTCAGA
AAAGTTAGAGATAAATATAAGGACTGTGTATCGTTATATTGATACAATTTCAACTAGTGGCGTACCTATAATTTCAGAAC
CAGGACATAACGGTGGATACACTTTATTGAACAATTTTATAGAGGCTCCTCTTTTTTTTGATTTTGAGGAGCAAACTTCA
CTATATCACGCTGCTGTTTTTGCAGAAGAAGCCGGATATTATGGAGGTGAAGCATTAAATAGGGCCATTTCAAAACTAAG
TAAATACTCAAATCAAGAGCAAGAAACAAAGATAAACCAACATTTAACTAGTCTTGAAGTAATAAGTCGATTAAGTTCAC
TCTCTATAGAAACTTTTTTGAAGGAGTTGGAGCAGGCCGTAGCTAACGGGTATTCAGTAAAAATTCTTTACCATAAAAGT
GGCGAAAAGCAATTAAATTATAGATCGGTCGATCCATACAGAATTATCTATTGGAATAATAAATGGTATGTAATTGGATT
TTGTCATCTTAGGAATGATATCCGTAGTTTTAGAGTAGATCGAATTGAAAGTTTAATACAAACCGAAAATAAGTTTAACC
GGCCAGACAATTTTTCAGCAAGTGACTTTTTTATAAAAAGTCTTCTTCCAACTATAGAAGATAAGGAAAGTATTATTTCT
TTGGTTATTAATGGGGATAAAAATGTATTGGCTGATATTTGCCAACATTGGCTTTTAGGAAATTATTTACAAGAACGGAC
TTCAAATCAAGCAGTTTTTCTTCTTGAAAAAGATATGATACATAAATATGTACCTTATTTACTTTTACCGTACAATAAAT
CTATTAAAGTTATTGAGCCAATAAGTCTTAAGAAGAGAATTATTGAAGTTCTGTCTGAATTAATAAAATTTCATCAAGTA
TGA

Upstream 100 bases:

>100_bases
CTTATTATATAGAAAGCTATCGGAAAGGAACAGTTGATGAGTTATACCAAAGATCGGAAATATATAATAGAAAATAAGTT
TCATATAGAGGTGAAATTAT

Downstream 100 bases:

>100_bases
TAACTTCCCTGACGTTAACTGTCAGGGAAGTTATATTATAATAGCTATATAAATTGTGATTGGAGTGTTATTAGATGCAA
ACAAAAAAAGTTTTTTTATA

Product: DeoR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MPKIDNMLAILWMLRSGEKITAKQISEKLEINIRTVYRYIDTISTSGVPIISEPGHNGGYTLLNNFIEAPLFFDFEEQTS
LYHAAVFAEEAGYYGGEALNRAISKLSKYSNQEQETKINQHLTSLEVISRLSSLSIETFLKELEQAVANGYSVKILYHKS
GEKQLNYRSVDPYRIIYWNNKWYVIGFCHLRNDIRSFRVDRIESLIQTENKFNRPDNFSASDFFIKSLLPTIEDKESIIS
LVINGDKNVLADICQHWLLGNYLQERTSNQAVFLLEKDMIHKYVPYLLLPYNKSIKVIEPISLKKRIIEVLSELIKFHQV

Sequences:

>Translated_320_residues
MPKIDNMLAILWMLRSGEKITAKQISEKLEINIRTVYRYIDTISTSGVPIISEPGHNGGYTLLNNFIEAPLFFDFEEQTS
LYHAAVFAEEAGYYGGEALNRAISKLSKYSNQEQETKINQHLTSLEVISRLSSLSIETFLKELEQAVANGYSVKILYHKS
GEKQLNYRSVDPYRIIYWNNKWYVIGFCHLRNDIRSFRVDRIESLIQTENKFNRPDNFSASDFFIKSLLPTIEDKESIIS
LVINGDKNVLADICQHWLLGNYLQERTSNQAVFLLEKDMIHKYVPYLLLPYNKSIKVIEPISLKKRIIEVLSELIKFHQV
>Mature_319_residues
PKIDNMLAILWMLRSGEKITAKQISEKLEINIRTVYRYIDTISTSGVPIISEPGHNGGYTLLNNFIEAPLFFDFEEQTSL
YHAAVFAEEAGYYGGEALNRAISKLSKYSNQEQETKINQHLTSLEVISRLSSLSIETFLKELEQAVANGYSVKILYHKSG
EKQLNYRSVDPYRIIYWNNKWYVIGFCHLRNDIRSFRVDRIESLIQTENKFNRPDNFSASDFFIKSLLPTIEDKESIISL
VINGDKNVLADICQHWLLGNYLQERTSNQAVFLLEKDMIHKYVPYLLLPYNKSIKVIEPISLKKRIIEVLSELIKFHQV

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 37099; Mature: 36968

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKIDNMLAILWMLRSGEKITAKQISEKLEINIRTVYRYIDTISTSGVPIISEPGHNGGY
CCCHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCH
TLLNNFIEAPLFFDFEEQTSLYHAAVFAEEAGYYGGEALNRAISKLSKYSNQEQETKINQ
HHHHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
HLTSLEVISRLSSLSIETFLKELEQAVANGYSVKILYHKSGEKQLNYRSVDPYRIIYWNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCEEEEEECC
KWYVIGFCHLRNDIRSFRVDRIESLIQTENKFNRPDNFSASDFFIKSLLPTIEDKESIIS
EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHEEE
LVINGDKNVLADICQHWLLGNYLQERTSNQAVFLLEKDMIHKYVPYLLLPYNKSIKVIEP
EEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCEEEECCCCCEEEECC
ISLKKRIIEVLSELIKFHQV
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PKIDNMLAILWMLRSGEKITAKQISEKLEINIRTVYRYIDTISTSGVPIISEPGHNGGY
CCHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCH
TLLNNFIEAPLFFDFEEQTSLYHAAVFAEEAGYYGGEALNRAISKLSKYSNQEQETKINQ
HHHHHHHCCCEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
HLTSLEVISRLSSLSIETFLKELEQAVANGYSVKILYHKSGEKQLNYRSVDPYRIIYWNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCEEEEEECC
KWYVIGFCHLRNDIRSFRVDRIESLIQTENKFNRPDNFSASDFFIKSLLPTIEDKESIIS
EEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHEEE
LVINGDKNVLADICQHWLLGNYLQERTSNQAVFLLEKDMIHKYVPYLLLPYNKSIKVIEP
EEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCEEEECCCCCEEEECC
ISLKKRIIEVLSELIKFHQV
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]