| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is 118478024
Identifier: 118478024
GI number: 118478024
Start: 2549640
End: 2550188
Strand: Direct
Name: 118478024
Synonym: BALH_2375
Alternate gene names: NA
Gene position: 2549640-2550188 (Clockwise)
Preceding gene: 118478022
Following gene: 118478025
Centisome position: 48.5
GC content: 36.61
Gene sequence:
>549_bases ATGAACAAATTATCAACAAAGTTAGTAGTAGCAATCGGAATTGGAGCAGCATTGTACGGCATATTAGGACTTTGGGGCTT TTCTATTGCACCAAATACATTTATTAAACCTGCGTTAGCTATTTTAACCGTTTTTGGAGCGTTATTCGGTCCAGTAGCAG GACTGTTAATAGGGCTTATCGGTCATACCGTAACAGATACAATCGCTGGATGGGGTATTTGGTGGGGATGGGTTATTAGT TCAGGCATTATCGGTTTTGCAATGGGACTCATTCAAAAAAGAGTTGGATTTAGTGTGAAAAACGGGACGTATAATAAAGG CGATATTTCTTATTTAGCTATTACTGGGTTAATTGGTATCGTCATTGCTATCATATTTGCGGGTGCATTCGATATTATTG TCATGGGAGAACCGTTTGACAAAATTGTAATACAAGTATTAGGTGCAACAATTGCTGATGTTATCGTATTTTTAGTTCTT GGATTGCCAATTACAATAGGCCTAGCTAAATCGAATAAGAAACATACACAATTAAAAATTGAAAAGTAG
Upstream 100 bases:
>100_bases GGTCATTTTTTGTTGTATAGAAAGGGAGTGTCGATGCATAATTCATTTTTAAAATAAATATAGAGTAATAAAAGTTGACT ATTAAGAGAGGGGAATTGTA
Downstream 100 bases:
>100_bases GGATGTTAACATGCAACCAATTATTTCTTTTGAACAATTCAGCTTTCAATATAAGCATGCGGCGCAGCCTACTGTAAAAG ACATTACGTTTCATATATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MNKLSTKLVVAIGIGAALYGILGLWGFSIAPNTFIKPALAILTVFGALFGPVAGLLIGLIGHTVTDTIAGWGIWWGWVIS SGIIGFAMGLIQKRVGFSVKNGTYNKGDISYLAITGLIGIVIAIIFAGAFDIIVMGEPFDKIVIQVLGATIADVIVFLVL GLPITIGLAKSNKKHTQLKIEK
Sequences:
>Translated_182_residues MNKLSTKLVVAIGIGAALYGILGLWGFSIAPNTFIKPALAILTVFGALFGPVAGLLIGLIGHTVTDTIAGWGIWWGWVIS SGIIGFAMGLIQKRVGFSVKNGTYNKGDISYLAITGLIGIVIAIIFAGAFDIIVMGEPFDKIVIQVLGATIADVIVFLVL GLPITIGLAKSNKKHTQLKIEK >Mature_182_residues MNKLSTKLVVAIGIGAALYGILGLWGFSIAPNTFIKPALAILTVFGALFGPVAGLLIGLIGHTVTDTIAGWGIWWGWVIS SGIIGFAMGLIQKRVGFSVKNGTYNKGDISYLAITGLIGIVIAIIFAGAFDIIVMGEPFDKIVIQVLGATIADVIVFLVL GLPITIGLAKSNKKHTQLKIEK
Specific function: Unknown
COG id: COG4720
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0397 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009825 - InterPro: IPR022914 [H]
Pfam domain/function: PF07155 DUF1393 [H]
EC number: NA
Molecular weight: Translated: 19105; Mature: 19105
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLSTKLVVAIGIGAALYGILGLWGFSIAPNTFIKPALAILTVFGALFGPVAGLLIGLI CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GHTVTDTIAGWGIWWGWVISSGIIGFAMGLIQKRVGFSVKNGTYNKGDISYLAITGLIGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCHHHHHHHHHHHH VIAIIFAGAFDIIVMGEPFDKIVIQVLGATIADVIVFLVLGLPITIGLAKSNKKHTQLKI HHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEE EK CC >Mature Secondary Structure MNKLSTKLVVAIGIGAALYGILGLWGFSIAPNTFIKPALAILTVFGALFGPVAGLLIGLI CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GHTVTDTIAGWGIWWGWVISSGIIGFAMGLIQKRVGFSVKNGTYNKGDISYLAITGLIGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCHHHHHHHHHHHH VIAIIFAGAFDIIVMGEPFDKIVIQVLGATIADVIVFLVLGLPITIGLAKSNKKHTQLKI HHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEE EK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA