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The map label for this gene is pepF [H]

Identifier: 118477977

GI number: 118477977

Start: 2494203

End: 2495894

Strand: Reverse

Name: pepF [H]

Synonym: BALH_2324

Alternate gene names: 118477977

Gene position: 2495894-2494203 (Counterclockwise)

Preceding gene: 118477981

Following gene: 118477975

Centisome position: 47.48

GC content: 29.73

Gene sequence:

>1692_bases
ATGCAGCGCTTAAATACGATTGATATTAGTAACGTTCTAGAATTAGAAAATACTCTTTCTACTTTATTGAATGAAATAAT
TTCTTCAAAGCTAGAACTTGAAAACTGGTTAAAAAAACAATCTACTTTCATTTGGGAAATTGAAGAACAATTAAGGTCGC
ACTATATCGCTTTTCAATGTAATACAGATAATAAAGAAATAAAAGATACTTTTGAATATGATCAAAAATATGTACGACCT
CTTTTGAAACGTTATCAAAATTCATTTGATACTAAATATTTAGAGTCCCCTTTTCGAATGGAACTTGATCCAAAAACGTA
CAGCTTACTAGATAAAAAAATTAAGAATGCGCAAACATTGTTTTGTGAAAAGAATATTGATTTAGAAGTGAACGAAGACA
AATTAGTAACCGAATACTTCGAAATCACAGGTGGTTTAACTGCATTATGGAATGGTGAAGAAAAAACAATTACTGAACTA
CAATCTTACTTACAAGATCCGGATCGTCATATACGAAAAAAAGCAAAAACGCTCATTTCTGAAACATTCTTATCTGTTGA
AGATAAATTACAACATATATTAAATGAATTAATCGTAATCCGTGACCAAAAAGCAAAAAACATTCAATTACATAATTATC
GTGATTATATGTTTAAAAAACATGAACGTTTTGATTATACACCTGAAGACTGCTATGAGCTTGCCGAATCTATTCGTAAA
TACGTAGTACCACTTATCGATAAAATATATAATAAGAAAAAATCTGAACTTCAAGTAGAAAGTCTTCGTCCATGGGATTT
AAAAGCAACCGCACCAAATCAAAAAGTATTAAAACCTATTGAAAAAGCGAGTGATTTAATCGAAAAAAGTTCTCATATTT
TACACAAACTTGACCATGAATTTTCCGCATTACTGGAACGTATGCATAAAAATAATTGCTTAGATTTAGAAAATCGTAAA
GGAAAAGGACCAGGAGGATTTTGCGAATATTTACCTGCTTCTCAATTATCTTTTATTTTCATGAATCTCAATCATACACA
TTATGATGTTACTACTTTCCTCCATGAAATGGGCCATAGTATTCATAATGATTGTATGAAGCAGTTAGAACTTCAAAAGT
ATTTAGAAATCCCTTCAGAATCAGCTGAACTAGCTAGTATGACAATGGAATTGTTTTCGATGGAGTATTGGGATACTTTT
TATGAAAATAAAGAAGAATTTATAAAAGCAAAATTAGATTTCTTTAAAGGTATTGTTAAATATTTACCACAAATGCTTAT
AGTTGATCAATTCCAGCATTGGATGTATGAAAATCCTAATCATACAGCTAAAGAAAGAAATGAAAAATATTTAGAATTAC
ATAACACTTACCAATCGAATATAGTAAATATTGAGGGGTATGAAAATTGGGTTGCAACTGGCTGGTTACCTGTGCTACAT
ATATTCGAAATACCATTCTATTACATCGAATATGCAATTGCACAACTTGGTGCACTGCAAATGTATAAACAATATAAAGA
AAATCCTAAACAAGCACTTGAAAATTATAAAAAAGCCTTATCATTAGGTAGCTCTAAATCTTTAACGGAAGTATATGAAG
CTGCTGGAATTCGTTTTGATTTTTCTGGCGAAATAATTAAAGAACTAATGTTATTTGTAGAGGGAGAATTAGAGTTACTT
GAACAATTATAG

Upstream 100 bases:

>100_bases
TTTAAATTTAACATTATTTCACATTTTCTCCTCTTAAAAAGGAAATTACAATTAATAAATAGAATATCTTCATGAATAAA
TAAAAAGTGAGGGATATGTC

Downstream 100 bases:

>100_bases
GAAGAAAGCTGCACCTATATTTTGGGTGTAGCTTTCTTCTCTATTTTATTAATCAGTTCTATATACTGAGAATCACCATA
TCCGATTGTTGGAAATAGTT

Product: oligoendopeptidase F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 563; Mature: 563

Protein sequence:

>563_residues
MQRLNTIDISNVLELENTLSTLLNEIISSKLELENWLKKQSTFIWEIEEQLRSHYIAFQCNTDNKEIKDTFEYDQKYVRP
LLKRYQNSFDTKYLESPFRMELDPKTYSLLDKKIKNAQTLFCEKNIDLEVNEDKLVTEYFEITGGLTALWNGEEKTITEL
QSYLQDPDRHIRKKAKTLISETFLSVEDKLQHILNELIVIRDQKAKNIQLHNYRDYMFKKHERFDYTPEDCYELAESIRK
YVVPLIDKIYNKKKSELQVESLRPWDLKATAPNQKVLKPIEKASDLIEKSSHILHKLDHEFSALLERMHKNNCLDLENRK
GKGPGGFCEYLPASQLSFIFMNLNHTHYDVTTFLHEMGHSIHNDCMKQLELQKYLEIPSESAELASMTMELFSMEYWDTF
YENKEEFIKAKLDFFKGIVKYLPQMLIVDQFQHWMYENPNHTAKERNEKYLELHNTYQSNIVNIEGYENWVATGWLPVLH
IFEIPFYYIEYAIAQLGALQMYKQYKENPKQALENYKKALSLGSSKSLTEVYEAAGIRFDFSGEIIKELMLFVEGELELL
EQL

Sequences:

>Translated_563_residues
MQRLNTIDISNVLELENTLSTLLNEIISSKLELENWLKKQSTFIWEIEEQLRSHYIAFQCNTDNKEIKDTFEYDQKYVRP
LLKRYQNSFDTKYLESPFRMELDPKTYSLLDKKIKNAQTLFCEKNIDLEVNEDKLVTEYFEITGGLTALWNGEEKTITEL
QSYLQDPDRHIRKKAKTLISETFLSVEDKLQHILNELIVIRDQKAKNIQLHNYRDYMFKKHERFDYTPEDCYELAESIRK
YVVPLIDKIYNKKKSELQVESLRPWDLKATAPNQKVLKPIEKASDLIEKSSHILHKLDHEFSALLERMHKNNCLDLENRK
GKGPGGFCEYLPASQLSFIFMNLNHTHYDVTTFLHEMGHSIHNDCMKQLELQKYLEIPSESAELASMTMELFSMEYWDTF
YENKEEFIKAKLDFFKGIVKYLPQMLIVDQFQHWMYENPNHTAKERNEKYLELHNTYQSNIVNIEGYENWVATGWLPVLH
IFEIPFYYIEYAIAQLGALQMYKQYKENPKQALENYKKALSLGSSKSLTEVYEAAGIRFDFSGEIIKELMLFVEGELELL
EQL
>Mature_563_residues
MQRLNTIDISNVLELENTLSTLLNEIISSKLELENWLKKQSTFIWEIEEQLRSHYIAFQCNTDNKEIKDTFEYDQKYVRP
LLKRYQNSFDTKYLESPFRMELDPKTYSLLDKKIKNAQTLFCEKNIDLEVNEDKLVTEYFEITGGLTALWNGEEKTITEL
QSYLQDPDRHIRKKAKTLISETFLSVEDKLQHILNELIVIRDQKAKNIQLHNYRDYMFKKHERFDYTPEDCYELAESIRK
YVVPLIDKIYNKKKSELQVESLRPWDLKATAPNQKVLKPIEKASDLIEKSSHILHKLDHEFSALLERMHKNNCLDLENRK
GKGPGGFCEYLPASQLSFIFMNLNHTHYDVTTFLHEMGHSIHNDCMKQLELQKYLEIPSESAELASMTMELFSMEYWDTF
YENKEEFIKAKLDFFKGIVKYLPQMLIVDQFQHWMYENPNHTAKERNEKYLELHNTYQSNIVNIEGYENWVATGWLPVLH
IFEIPFYYIEYAIAQLGALQMYKQYKENPKQALENYKKALSLGSSKSLTEVYEAAGIRFDFSGEIIKELMLFVEGELELL
EQL

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 66782; Mature: 66782

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRLNTIDISNVLELENTLSTLLNEIISSKLELENWLKKQSTFIWEIEEQLRSHYIAFQC
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEE
NTDNKEIKDTFEYDQKYVRPLLKRYQNSFDTKYLESPFRMELDPKTYSLLDKKIKNAQTL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEECCHHHHHHHHHHHHHHHE
FCEKNIDLEVNEDKLVTEYFEITGGLTALWNGEEKTITELQSYLQDPDRHIRKKAKTLIS
EEECCCCEEECCCHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHH
ETFLSVEDKLQHILNELIVIRDQKAKNIQLHNYRDYMFKKHERFDYTPEDCYELAESIRK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
YVVPLIDKIYNKKKSELQVESLRPWDLKATAPNQKVLKPIEKASDLIEKSSHILHKLDHE
HHHHHHHHHHCCHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSALLERMHKNNCLDLENRKGKGPGGFCEYLPASQLSFIFMNLNHTHYDVTTFLHEMGHS
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
IHNDCMKQLELQKYLEIPSESAELASMTMELFSMEYWDTFYENKEEFIKAKLDFFKGIVK
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
YLPQMLIVDQFQHWMYENPNHTAKERNEKYLELHNTYQSNIVNIEGYENWVATGWLPVLH
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHH
IFEIPFYYIEYAIAQLGALQMYKQYKENPKQALENYKKALSLGSSKSLTEVYEAAGIRFD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC
FSGEIIKELMLFVEGELELLEQL
CCHHHHHHHHHHHCCHHHHHHCC
>Mature Secondary Structure
MQRLNTIDISNVLELENTLSTLLNEIISSKLELENWLKKQSTFIWEIEEQLRSHYIAFQC
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEE
NTDNKEIKDTFEYDQKYVRPLLKRYQNSFDTKYLESPFRMELDPKTYSLLDKKIKNAQTL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEECCHHHHHHHHHHHHHHHE
FCEKNIDLEVNEDKLVTEYFEITGGLTALWNGEEKTITELQSYLQDPDRHIRKKAKTLIS
EEECCCCEEECCCHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHH
ETFLSVEDKLQHILNELIVIRDQKAKNIQLHNYRDYMFKKHERFDYTPEDCYELAESIRK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
YVVPLIDKIYNKKKSELQVESLRPWDLKATAPNQKVLKPIEKASDLIEKSSHILHKLDHE
HHHHHHHHHHCCHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSALLERMHKNNCLDLENRKGKGPGGFCEYLPASQLSFIFMNLNHTHYDVTTFLHEMGHS
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
IHNDCMKQLELQKYLEIPSESAELASMTMELFSMEYWDTFYENKEEFIKAKLDFFKGIVK
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
YLPQMLIVDQFQHWMYENPNHTAKERNEKYLELHNTYQSNIVNIEGYENWVATGWLPVLH
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHH
IFEIPFYYIEYAIAQLGALQMYKQYKENPKQALENYKKALSLGSSKSLTEVYEAAGIRFD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC
FSGEIIKELMLFVEGELELLEQL
CCHHHHHHHHHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7569993; 8253680 [H]