| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is ybgA [C]
Identifier: 118477941
GI number: 118477941
Start: 2456914
End: 2457882
Strand: Direct
Name: ybgA [C]
Synonym: BALH_2287
Alternate gene names: 118477941
Gene position: 2456914-2457882 (Clockwise)
Preceding gene: 118477939
Following gene: 118477942
Centisome position: 46.74
GC content: 32.2
Gene sequence:
>969_bases ATGCGACAATTTGCAAAACCAACAATTGTTGTAAGTAAATGTTTAGAATTTGATGCTTGTCGTTATAATGGAGAGATGAT TCCAGATGTAACAATCCGAAATTTGCAGCCATTTGTTACATTTATACCTGTTTGTCCAGAAGTCGAGATCGGATTGGGGA CTCCTCGTGAAACGATACGAATTGTAGAAGAAAATGGTGTGAATAAGCTTGTGCAGCCGTCGACGCGGGAAGATGTAACT AAAAAAATGGAGCAATTTTCAAATGACTTTTTACAAACGATACCTGATGTGGATGGTTTTATTTTAAAGAATCGTTCGCC AAGCTGTGGTACCCGTGATGTGAAAATTTATTCTGGTTTTGAAAAAGCGCCAGCAAAAGGAAAGGGATCAGGCTTATTTG GCGGAGCAGTAATAAAAAATTTTTCACATCTTCCAATTGAAGAAGAAGGTAGATTGTCGAATTTTATTATTAGAGAACAT TTCTTTACAAGGTTATTTACAATCGCATATTACAAAATAATCAAACATAATAAAAATATGAAAGACCTCGTATCGTTTCA GTCTGATAATAAATATTTATTTATGGCATATAATCAGGTAAAACAAAAGGAATTGGGACGAATAATTGCAAATCACAAAA ATGAAAAGATTGAAGTGGTATTTGAAAATTATGAGAAAACTTTATATGAATTATTTATGCGCACACCCCGCTATACATCG AATGTAAATGTATGTGAGCACATTTTTGGATATTTTAAAACAAAATTGAAAAAACAAGAAAAAGATCATTTTTTAGATCT GATACAAAAATATAAGGAAAAGAAAAGCCCACTTAGTAGTATACTTGCAATTTTAAAATCATGGGCTCTTCGATTTGATG AAAAGTATTTATTACGACAAACATATTTCGAACCATACCCTGAAGCTTTAGTAGAGATTTCAGATTCAGGTAAAGGTAGA GATTATTAA
Upstream 100 bases:
>100_bases TTGGAAATGTTCATTAAAATATAAATAAAACAAACTTTGATTATGATACTAAACTTAGTACAATTTATATAGTACGGACT AGTACAAAGGAGGTAATGAA
Downstream 100 bases:
>100_bases ACATAAAATTACATAATTCGACAAGAAAACTCCTACATTGTTGTAGAACAATGTAGGAATTTTTTTGTGCATTAGTACAG AATCTGTTTTAAAATTAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MRQFAKPTIVVSKCLEFDACRYNGEMIPDVTIRNLQPFVTFIPVCPEVEIGLGTPRETIRIVEENGVNKLVQPSTREDVT KKMEQFSNDFLQTIPDVDGFILKNRSPSCGTRDVKIYSGFEKAPAKGKGSGLFGGAVIKNFSHLPIEEEGRLSNFIIREH FFTRLFTIAYYKIIKHNKNMKDLVSFQSDNKYLFMAYNQVKQKELGRIIANHKNEKIEVVFENYEKTLYELFMRTPRYTS NVNVCEHIFGYFKTKLKKQEKDHFLDLIQKYKEKKSPLSSILAILKSWALRFDEKYLLRQTYFEPYPEALVEISDSGKGR DY
Sequences:
>Translated_322_residues MRQFAKPTIVVSKCLEFDACRYNGEMIPDVTIRNLQPFVTFIPVCPEVEIGLGTPRETIRIVEENGVNKLVQPSTREDVT KKMEQFSNDFLQTIPDVDGFILKNRSPSCGTRDVKIYSGFEKAPAKGKGSGLFGGAVIKNFSHLPIEEEGRLSNFIIREH FFTRLFTIAYYKIIKHNKNMKDLVSFQSDNKYLFMAYNQVKQKELGRIIANHKNEKIEVVFENYEKTLYELFMRTPRYTS NVNVCEHIFGYFKTKLKKQEKDHFLDLIQKYKEKKSPLSSILAILKSWALRFDEKYLLRQTYFEPYPEALVEISDSGKGR DY >Mature_322_residues MRQFAKPTIVVSKCLEFDACRYNGEMIPDVTIRNLQPFVTFIPVCPEVEIGLGTPRETIRIVEENGVNKLVQPSTREDVT KKMEQFSNDFLQTIPDVDGFILKNRSPSCGTRDVKIYSGFEKAPAKGKGSGLFGGAVIKNFSHLPIEEEGRLSNFIIREH FFTRLFTIAYYKIIKHNKNMKDLVSFQSDNKYLFMAYNQVKQKELGRIIANHKNEKIEVVFENYEKTLYELFMRTPRYTS NVNVCEHIFGYFKTKLKKQEKDHFLDLIQKYKEKKSPLSSILAILKSWALRFDEKYLLRQTYFEPYPEALVEISDSGKGR DY
Specific function: Unknown
COG id: COG1683
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786925, Length=158, Percent_Identity=23.4177215189873, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37529; Mature: 37529
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQFAKPTIVVSKCLEFDACRYNGEMIPDVTIRNLQPFVTFIPVCPEVEIGLGTPRETIR CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCEECCCCCHHHEE IVEENGVNKLVQPSTREDVTKKMEQFSNDFLQTIPDVDGFILKNRSPSCGTRDVKIYSGF EHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEEECCC EKAPAKGKGSGLFGGAVIKNFSHLPIEEEGRLSNFIIREHFFTRLFTIAYYKIIKHNKNM CCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH KDLVSFQSDNKYLFMAYNQVKQKELGRIIANHKNEKIEVVFENYEKTLYELFMRTPRYTS HHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCCC NVNVCEHIFGYFKTKLKKQEKDHFLDLIQKYKEKKSPLSSILAILKSWALRFDEKYLLRQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHH TYFEPYPEALVEISDSGKGRDY HHCCCCHHHHEEECCCCCCCCC >Mature Secondary Structure MRQFAKPTIVVSKCLEFDACRYNGEMIPDVTIRNLQPFVTFIPVCPEVEIGLGTPRETIR CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCEECCCCCHHHEE IVEENGVNKLVQPSTREDVTKKMEQFSNDFLQTIPDVDGFILKNRSPSCGTRDVKIYSGF EHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEEECCC EKAPAKGKGSGLFGGAVIKNFSHLPIEEEGRLSNFIIREHFFTRLFTIAYYKIIKHNKNM CCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH KDLVSFQSDNKYLFMAYNQVKQKELGRIIANHKNEKIEVVFENYEKTLYELFMRTPRYTS HHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCCC NVNVCEHIFGYFKTKLKKQEKDHFLDLIQKYKEKKSPLSSILAILKSWALRFDEKYLLRQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHH TYFEPYPEALVEISDSGKGRDY HHCCCCHHHHEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA