| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is gpmA [H]
Identifier: 118477895
GI number: 118477895
Start: 2396266
End: 2397003
Strand: Direct
Name: gpmA [H]
Synonym: BALH_2240
Alternate gene names: 118477895
Gene position: 2396266-2397003 (Clockwise)
Preceding gene: 118477894
Following gene: 118477896
Centisome position: 45.58
GC content: 34.82
Gene sequence:
>738_bases ATGATAAAACTTGTACTTATTCGTCACGGACAGAGTTTATGGAATCTTGAAAATCGTTTTACTGGATGGACAGATGTAGA TTTATCAGAGAATGGATTAAGTGAAGCGAGAGAAGCAGGAGCGATATTAAAGAAAAATGGATATACTTTTGATGTAGCTT ATACATCTGTATTAAAACGAGCAATTCGGACGTTATGGATTGTACTTCATGAAATGAATCTTTCCTGGGTACCAGTACAT AAATCTTGGAAGCTAAATGAAAGACATTATGGTGCATTGCAAGGGTTAAATAAAGATGAAACAGCGAAAAAATATGGTGA GGAGCAAGTTCATATTTGGAGAAGAAGTATTGATGTAAGACCACCTGCTCTTACTGAAGATGATCCTAGATATGAAATGA ATGATCCAAGATATAAAGAACTGAAAAAAGGTGAGTTTCCATTGACTGAATGTTTAGTGGATACGGAGAAAAGAGTACTT AATTATTGGCATTCAGAAATTGCGCCATCATTAAAAAGTGGTGAAAAGGTGATAATTTCATCGCACGGTAATACAATTCG TTCGCTAGTGAAATACTTAGATAACCTTTCAAGTGATGGTGTTGTTTCATTAAATATTCCAACAAGCATTCCGCTCGTTT ATGAATTAGACGATGATTTACGTCCAATTCGTCATTATTATTTAAGCATGGACGGAGAAGTACCAGAAGGGGAATTTCCG AAACACATTGTTTTTTAA
Upstream 100 bases:
>100_bases AGCTATCATAGAGTAAATGGATAAAAAGATACATTACTAGATACTTTATACGTGTACGCAATGGAACAATAAAATTCACA TTTCCGAGAGGGGAATTATA
Downstream 100 bases:
>100_bases CATGAAAATTTGAAACGTATGCTTGTCTACATATACAATGTAGATTCAGGATAAAAGACGTGGTACCTTCTAATGTATAT GCGATATTGCTAAGTTTAGA
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-dependent PGAM 1; PGAM 1; Phosphoglyceromutase 1; dPGM 1 [H]
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MIKLVLIRHGQSLWNLENRFTGWTDVDLSENGLSEAREAGAILKKNGYTFDVAYTSVLKRAIRTLWIVLHEMNLSWVPVH KSWKLNERHYGALQGLNKDETAKKYGEEQVHIWRRSIDVRPPALTEDDPRYEMNDPRYKELKKGEFPLTECLVDTEKRVL NYWHSEIAPSLKSGEKVIISSHGNTIRSLVKYLDNLSSDGVVSLNIPTSIPLVYELDDDLRPIRHYYLSMDGEVPEGEFP KHIVF
Sequences:
>Translated_245_residues MIKLVLIRHGQSLWNLENRFTGWTDVDLSENGLSEAREAGAILKKNGYTFDVAYTSVLKRAIRTLWIVLHEMNLSWVPVH KSWKLNERHYGALQGLNKDETAKKYGEEQVHIWRRSIDVRPPALTEDDPRYEMNDPRYKELKKGEFPLTECLVDTEKRVL NYWHSEIAPSLKSGEKVIISSHGNTIRSLVKYLDNLSSDGVVSLNIPTSIPLVYELDDDLRPIRHYYLSMDGEVPEGEFP KHIVF >Mature_245_residues MIKLVLIRHGQSLWNLENRFTGWTDVDLSENGLSEAREAGAILKKNGYTFDVAYTSVLKRAIRTLWIVLHEMNLSWVPVH KSWKLNERHYGALQGLNKDETAKKYGEEQVHIWRRSIDVRPPALTEDDPRYEMNDPRYKELKKGEFPLTECLVDTEKRVL NYWHSEIAPSLKSGEKVIISSHGNTIRSLVKYLDNLSSDGVVSLNIPTSIPLVYELDDDLRPIRHYYLSMDGEVPEGEFP KHIVF
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0588
COG function: function code G; Phosphoglycerate mutase 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily [H]
Homologues:
Organism=Homo sapiens, GI50593010, Length=234, Percent_Identity=50, Blast_Score=255, Evalue=2e-68, Organism=Homo sapiens, GI4505753, Length=234, Percent_Identity=52.991452991453, Blast_Score=249, Evalue=1e-66, Organism=Homo sapiens, GI71274132, Length=234, Percent_Identity=50.4273504273504, Blast_Score=235, Evalue=3e-62, Organism=Homo sapiens, GI4502445, Length=243, Percent_Identity=43.2098765432099, Blast_Score=226, Evalue=2e-59, Organism=Homo sapiens, GI40353764, Length=243, Percent_Identity=43.2098765432099, Blast_Score=226, Evalue=2e-59, Organism=Homo sapiens, GI310129614, Length=160, Percent_Identity=56.875, Blast_Score=173, Evalue=2e-43, Organism=Escherichia coli, GI1786970, Length=234, Percent_Identity=62.3931623931624, Blast_Score=313, Evalue=6e-87, Organism=Saccharomyces cerevisiae, GI6322697, Length=229, Percent_Identity=50.6550218340611, Blast_Score=226, Evalue=2e-60, Organism=Saccharomyces cerevisiae, GI6324516, Length=277, Percent_Identity=31.7689530685921, Blast_Score=128, Evalue=9e-31, Organism=Saccharomyces cerevisiae, GI6320183, Length=283, Percent_Identity=29.6819787985866, Blast_Score=112, Evalue=7e-26, Organism=Drosophila melanogaster, GI85725270, Length=224, Percent_Identity=51.7857142857143, Blast_Score=231, Evalue=3e-61, Organism=Drosophila melanogaster, GI85725272, Length=224, Percent_Identity=51.7857142857143, Blast_Score=231, Evalue=3e-61, Organism=Drosophila melanogaster, GI24650981, Length=224, Percent_Identity=51.7857142857143, Blast_Score=231, Evalue=3e-61, Organism=Drosophila melanogaster, GI24646216, Length=224, Percent_Identity=50.8928571428571, Blast_Score=229, Evalue=1e-60, Organism=Drosophila melanogaster, GI28571815, Length=218, Percent_Identity=39.4495412844037, Blast_Score=173, Evalue=9e-44, Organism=Drosophila melanogaster, GI28571817, Length=218, Percent_Identity=39.4495412844037, Blast_Score=173, Evalue=9e-44, Organism=Drosophila melanogaster, GI24648979, Length=218, Percent_Identity=39.4495412844037, Blast_Score=173, Evalue=1e-43,
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 28362; Mature: 28362
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: PS00175 PG_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKLVLIRHGQSLWNLENRFTGWTDVDLSENGLSEAREAGAILKKNGYTFDVAYTSVLKR CEEEEEEECCCHHHHHHHHCCCCEECCCCCCCHHHHHHCCCEEECCCCEEEHHHHHHHHH AIRTLWIVLHEMNLSWVPVHKSWKLNERHYGALQGLNKDETAKKYGEEQVHIWRRSIDVR HHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHCCCCCCHHHHHHCCHHHHHHHHHCCCC PPALTEDDPRYEMNDPRYKELKKGEFPLTECLVDTEKRVLNYWHSEIAPSLKSGEKVIIS CCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE SHGNTIRSLVKYLDNLSSDGVVSLNIPTSIPLVYELDDDLRPIRHYYLSMDGEVPEGEFP CCCHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCC KHIVF CCCCC >Mature Secondary Structure MIKLVLIRHGQSLWNLENRFTGWTDVDLSENGLSEAREAGAILKKNGYTFDVAYTSVLKR CEEEEEEECCCHHHHHHHHCCCCEECCCCCCCHHHHHHCCCEEECCCCEEEHHHHHHHHH AIRTLWIVLHEMNLSWVPVHKSWKLNERHYGALQGLNKDETAKKYGEEQVHIWRRSIDVR HHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHCCCCCCHHHHHHCCHHHHHHHHHCCCC PPALTEDDPRYEMNDPRYKELKKGEFPLTECLVDTEKRVLNYWHSEIAPSLKSGEKVIIS CCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE SHGNTIRSLVKYLDNLSSDGVVSLNIPTSIPLVYELDDDLRPIRHYYLSMDGEVPEGEFP CCCHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCC KHIVF CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA