| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is 118477888
Identifier: 118477888
GI number: 118477888
Start: 2390431
End: 2391135
Strand: Direct
Name: 118477888
Synonym: BALH_2233
Alternate gene names: NA
Gene position: 2390431-2391135 (Clockwise)
Preceding gene: 118477887
Following gene: 118477889
Centisome position: 45.47
GC content: 34.04
Gene sequence:
>705_bases ATGAATATTCTAAAGGGAAAAGATTTAGAAGATCCATTGTTTCCTTTCATTTGCAAGATTGATAATCCAGAAGAAATTGA TAATCCTGATTTGTGGGAAAAAGCGAATCCAATGTTTAGTGAGCCAAGAAGTTCTTATGCTAAACAATTATTTAAAAAGG TATTAACTCAATATAAACAATTGGCCAACAATCCATCAAACCGTGAGGAATTCATAACAAAACGTATGAATTATCCTGAA ACAGATTTAACAAAGTCTGTTGCTCCGTGGGAAGAAATAATGCGTACAGGTTTTGAAGAAGATGGAGAAACGCTTAGAGA AGTTCCAGATTTAAGACATAAAACAGCCGTTGGTGGCCTCGATTTCGCCAGCATCAAAGACTTTGCTTCAGTCGGGCTAT TGTTTAAACATGGTGAGGATTATATTTGGAAATCACATTCTTTTATAAGAAAAGGATTTTTGGACAAAGTGAAATTAAAA GTACCCATTAAAGAATGGGAAGAACAAGGTTTACTTACTATTCTAGATGAACCTGTTATTAATATTTCTCACATTGTTGA TTGGTTTGTGAAAATGCGTGAGTTATATGGGGTTAATACGATTGTAGCTGATACATTCCGTCTTGATCTTGTTAAAACAG CACTTGAAGCTGAAGGATTTACATTGTTGTATATCCGTAATCCAAAGGCAATACATTCTCTTTAG
Upstream 100 bases:
>100_bases GTGCTGGAAAGGACCAAAGAAACATTATTATTAAGCGTTATTTAGAAGATGAAGATGTATGTGATTATATGGTGTATAAC GAACTTGGCATGAGCGAGCG
Downstream 100 bases:
>100_bases CTCCAAGAGTTGAAACGTTATTTGCAAACAATCGTATTATTTTTGGAGATAATCCATTAATGCGTTGGTACACCAATAAC GTTTACGTCCATATCAAAAA
Product: phage terminase, large subunit
Products: NA
Alternate protein names: Phage Terminase; Terminase; Terminase Large Subunit; Phage-Terminase Large Subunit; Prophage; Phage Terminase-Like Protein Large Subunit; Phage Related Terminase Large Sub-Unit
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MNILKGKDLEDPLFPFICKIDNPEEIDNPDLWEKANPMFSEPRSSYAKQLFKKVLTQYKQLANNPSNREEFITKRMNYPE TDLTKSVAPWEEIMRTGFEEDGETLREVPDLRHKTAVGGLDFASIKDFASVGLLFKHGEDYIWKSHSFIRKGFLDKVKLK VPIKEWEEQGLLTILDEPVINISHIVDWFVKMRELYGVNTIVADTFRLDLVKTALEAEGFTLLYIRNPKAIHSL
Sequences:
>Translated_234_residues MNILKGKDLEDPLFPFICKIDNPEEIDNPDLWEKANPMFSEPRSSYAKQLFKKVLTQYKQLANNPSNREEFITKRMNYPE TDLTKSVAPWEEIMRTGFEEDGETLREVPDLRHKTAVGGLDFASIKDFASVGLLFKHGEDYIWKSHSFIRKGFLDKVKLK VPIKEWEEQGLLTILDEPVINISHIVDWFVKMRELYGVNTIVADTFRLDLVKTALEAEGFTLLYIRNPKAIHSL >Mature_234_residues MNILKGKDLEDPLFPFICKIDNPEEIDNPDLWEKANPMFSEPRSSYAKQLFKKVLTQYKQLANNPSNREEFITKRMNYPE TDLTKSVAPWEEIMRTGFEEDGETLREVPDLRHKTAVGGLDFASIKDFASVGLLFKHGEDYIWKSHSFIRKGFLDKVKLK VPIKEWEEQGLLTILDEPVINISHIVDWFVKMRELYGVNTIVADTFRLDLVKTALEAEGFTLLYIRNPKAIHSL
Specific function: Unknown
COG id: COG4626
COG function: function code R; Phage terminase-like protein, large subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27150; Mature: 27150
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILKGKDLEDPLFPFICKIDNPEEIDNPDLWEKANPMFSEPRSSYAKQLFKKVLTQYKQ CCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH LANNPSNREEFITKRMNYPETDLTKSVAPWEEIMRTGFEEDGETLREVPDLRHKTAVGGL HHCCCCCHHHHHHHHCCCCHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC DFASIKDFASVGLLFKHGEDYIWKSHSFIRKGFLDKVKLKVPIKEWEEQGLLTILDEPVI CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEECCHHHHHHCCCEEECCCCCH NISHIVDWFVKMRELYGVNTIVADTFRLDLVKTALEAEGFTLLYIRNPKAIHSL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHCC >Mature Secondary Structure MNILKGKDLEDPLFPFICKIDNPEEIDNPDLWEKANPMFSEPRSSYAKQLFKKVLTQYKQ CCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH LANNPSNREEFITKRMNYPETDLTKSVAPWEEIMRTGFEEDGETLREVPDLRHKTAVGGL HHCCCCCHHHHHHHHCCCCHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC DFASIKDFASVGLLFKHGEDYIWKSHSFIRKGFLDKVKLKVPIKEWEEQGLLTILDEPVI CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEECCHHHHHHCCCEEECCCCCH NISHIVDWFVKMRELYGVNTIVADTFRLDLVKTALEAEGFTLLYIRNPKAIHSL HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA