| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is yodN [H]
Identifier: 118477727
GI number: 118477727
Start: 2213700
End: 2214362
Strand: Direct
Name: yodN [H]
Synonym: BALH_2064
Alternate gene names: 118477727
Gene position: 2213700-2214362 (Clockwise)
Preceding gene: 118477726
Following gene: 118477729
Centisome position: 42.11
GC content: 31.98
Gene sequence:
>663_bases ATGGCAAGGAAAAAGCAACCTAAATATAACGTAGGGGACATAGTCGTGATTACGCTATATGGAACCGTTGGTAAAATCAC AAATATGAAGGTTTTAGATGGAGTTTACGTATACGAAGTAAATAATCACGATGGTTTTTACGTTGAGCAAACATTGCAGC ATGTTTCAGAGCAAGATATGAAAAAAGGTGAAACTGAGTGGATTGAATTAAATTATCATTTCACATTTGGTGATCTCGTG CAAGTAACAGGATACGATAAAGATGTGTTTCGAATTGTTGGTTTTCGTACAGAAGTATGGAGATATAAAAATGACGCATG GGAAGATACAATATACGAACTGTCACGAATTACGGATGGTGAATGGTTAGAAGCGGATGAGTCAGATTTAACGTTACTTG CTAATGCTCAAACGGCAAATGCAATTTTGAAGAAAATGAAACAAGATAAAGCAGGTATGAATAAATTAGATTTAGGAAAA TTAAAGTCAATTAACAACTCAAAAAAAGTGAGTGTTAAGACAAATCGTCAAGAAATCATTGATGGATTACTTGATATATA TAACGATTATCAATTGTTATTCGATACATTTAAAGATGAAGAATACAAAATTGTTATGGATGTTGTTCATAATTATTTAG TTAAATTGACAGAGAAAAAATAG
Upstream 100 bases:
>100_bases TTGAAAAAATTTATGAATATACGCTTCTGTGATAAGCGTTTTTATGTAGGTTGCATATACTGTTATCAAAATCACGACGT CAAAAAAAGGAGAGATATAG
Downstream 100 bases:
>100_bases TTAACTAGAAAGAGAGAATGAATTGAACAACAACATATGCAGTATAAGGTATGCCTACAATTATTAAAAAAATAAAAAGC CATTTAATAAGAGAGTCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MARKKQPKYNVGDIVVITLYGTVGKITNMKVLDGVYVYEVNNHDGFYVEQTLQHVSEQDMKKGETEWIELNYHFTFGDLV QVTGYDKDVFRIVGFRTEVWRYKNDAWEDTIYELSRITDGEWLEADESDLTLLANAQTANAILKKMKQDKAGMNKLDLGK LKSINNSKKVSVKTNRQEIIDGLLDIYNDYQLLFDTFKDEEYKIVMDVVHNYLVKLTEKK
Sequences:
>Translated_220_residues MARKKQPKYNVGDIVVITLYGTVGKITNMKVLDGVYVYEVNNHDGFYVEQTLQHVSEQDMKKGETEWIELNYHFTFGDLV QVTGYDKDVFRIVGFRTEVWRYKNDAWEDTIYELSRITDGEWLEADESDLTLLANAQTANAILKKMKQDKAGMNKLDLGK LKSINNSKKVSVKTNRQEIIDGLLDIYNDYQLLFDTFKDEEYKIVMDVVHNYLVKLTEKK >Mature_219_residues ARKKQPKYNVGDIVVITLYGTVGKITNMKVLDGVYVYEVNNHDGFYVEQTLQHVSEQDMKKGETEWIELNYHFTFGDLVQ VTGYDKDVFRIVGFRTEVWRYKNDAWEDTIYELSRITDGEWLEADESDLTLLANAQTANAILKKMKQDKAGMNKLDLGKL KSINNSKKVSVKTNRQEIIDGLLDIYNDYQLLFDTFKDEEYKIVMDVVHNYLVKLTEKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25644; Mature: 25513
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKKQPKYNVGDIVVITLYGTVGKITNMKVLDGVYVYEVNNHDGFYVEQTLQHVSEQDM CCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCEEEEEECCCCCCHHHHHHHHHHHHHH KKGETEWIELNYHFTFGDLVQVTGYDKDVFRIVGFRTEVWRYKNDAWEDTIYELSRITDG HCCCCEEEEEEEEEECCCEEEECCCCHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHCCCC EWLEADESDLTLLANAQTANAILKKMKQDKAGMNKLDLGKLKSINNSKKVSVKTNRQEII CCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCEEEEECCHHHHH DGLLDIYNDYQLLFDTFKDEEYKIVMDVVHNYLVKLTEKK HHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ARKKQPKYNVGDIVVITLYGTVGKITNMKVLDGVYVYEVNNHDGFYVEQTLQHVSEQDM CCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCEEEEEECCCCCCHHHHHHHHHHHHHH KKGETEWIELNYHFTFGDLVQVTGYDKDVFRIVGFRTEVWRYKNDAWEDTIYELSRITDG HCCCCEEEEEEEEEECCCEEEECCCCHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHCCCC EWLEADESDLTLLANAQTANAILKKMKQDKAGMNKLDLGKLKSINNSKKVSVKTNRQEII CCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCEEEEECCHHHHH DGLLDIYNDYQLLFDTFKDEEYKIVMDVVHNYLVKLTEKK HHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9734814; 9384377 [H]