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The map label for this gene is cisA [H]

Identifier: 118477628

GI number: 118477628

Start: 2111008

End: 2111790

Strand: Direct

Name: cisA [H]

Synonym: BALH_1956

Alternate gene names: 118477628

Gene position: 2111008-2111790 (Clockwise)

Preceding gene: 118477627

Following gene: 118477629

Centisome position: 40.16

GC content: 36.91

Gene sequence:

>783_bases
ATGGGAAAGAAAGTAGTTGGTTACATACGAGTTTCAACGGAAGGACAAGTACGTGATGGGTATAGTTTAGCGTATCAAGT
AGAAGAGATTGAACGTTACTGTAACGAAAATAATTTAGAACTACTTCGTGTGTATGAAGATAGAGGATTAAGCGGAGCGA
CTGTTGATGAAGAGGGATTAACAGTTGAACGTGATGGACTACAAGAGCTATTGTCCGATATGGCGTATAAACAAGTAAGC
TATGTTGTTGTGTTGAATACATCACGATTGTGGCGCTCTGATATGGCGAAAGTATTGATACAACGAGAACTAAAGAAACA
TGAAGTAGATGTGAAGGCAATTGAACAATCAAGCTATAGTATTTACACACATGATCCAAATGACTTTTTGGTGAATGGCA
TGTTAGAACTATTAGACCAATATCAAAGACTTGAAATAGCATTAAAGTTAAGCAGAGGTAGAAAAAAGAAGGCTGAACGA
GGTGGGTATGCAGGTGGCGGTGTACTGTTTGGTTACAAGGCCAAAAAAGGACAAAAGGTGTTAGAAGTAGATGCTGGGAA
AGCGGTAGTTGTACGTAGACTATTTGAGTTAAGATACATTTTTAAAAATTGGTCATTTACCCAATTGGCGAAACAATTGA
ATGTAGAAGGATACTGCACAGCGAAAGGTAAACAATTTACGAAAGTACAAGTGAAACGCATGTTAGATAGAGAGAATTTT
TATCGTGGCATGTATAAATATGGGAAAATACAAACAAAAGGACAACATGCAGCAATTATATAA

Upstream 100 bases:

>100_bases
TAAAGTACGTTTTAACGGATGGACGTTATGAACACGTTATCCGCAAAAAACGGGTAAACGTTACAGGGACTAAAATTACT
GTAACGGGAGGGAATTTATA

Downstream 100 bases:

>100_bases
CAGTCGTACTTAAAAAAATCGCTCATTTTACTATAAGTACTTATGAAATTATGAAAATGGATAGGCTTGCGTACCTATGC
GCATCGGAAGATGAACGCTC

Product: resolvase

Products: NA

Alternate protein names: Stage IV sporulation protein CA [H]

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MGKKVVGYIRVSTEGQVRDGYSLAYQVEEIERYCNENNLELLRVYEDRGLSGATVDEEGLTVERDGLQELLSDMAYKQVS
YVVVLNTSRLWRSDMAKVLIQRELKKHEVDVKAIEQSSYSIYTHDPNDFLVNGMLELLDQYQRLEIALKLSRGRKKKAER
GGYAGGGVLFGYKAKKGQKVLEVDAGKAVVVRRLFELRYIFKNWSFTQLAKQLNVEGYCTAKGKQFTKVQVKRMLDRENF
YRGMYKYGKIQTKGQHAAII

Sequences:

>Translated_260_residues
MGKKVVGYIRVSTEGQVRDGYSLAYQVEEIERYCNENNLELLRVYEDRGLSGATVDEEGLTVERDGLQELLSDMAYKQVS
YVVVLNTSRLWRSDMAKVLIQRELKKHEVDVKAIEQSSYSIYTHDPNDFLVNGMLELLDQYQRLEIALKLSRGRKKKAER
GGYAGGGVLFGYKAKKGQKVLEVDAGKAVVVRRLFELRYIFKNWSFTQLAKQLNVEGYCTAKGKQFTKVQVKRMLDRENF
YRGMYKYGKIQTKGQHAAII
>Mature_259_residues
GKKVVGYIRVSTEGQVRDGYSLAYQVEEIERYCNENNLELLRVYEDRGLSGATVDEEGLTVERDGLQELLSDMAYKQVSY
VVVLNTSRLWRSDMAKVLIQRELKKHEVDVKAIEQSSYSIYTHDPNDFLVNGMLELLDQYQRLEIALKLSRGRKKKAERG
GYAGGGVLFGYKAKKGQKVLEVDAGKAVVVRRLFELRYIFKNWSFTQLAKQLNVEGYCTAKGKQFTKVQVKRMLDRENFY
RGMYKYGKIQTKGQHAAII

Specific function: Putative site-specific recombinase having a very important role in sporulation. It probably plays a role in the recombination of spoIIIC and spoIVCB to form sigma K factor [H]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 recombinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011109
- InterPro:   IPR006118
- InterPro:   IPR006119 [H]

Pfam domain/function: PF07508 Recombinase; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 29909; Mature: 29778

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS00397 RECOMBINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKKVVGYIRVSTEGQVRDGYSLAYQVEEIERYCNENNLELLRVYEDRGLSGATVDEEGL
CCCEEEEEEEECCCCCCCCCHHHEEEHHHHHHHHCCCCEEEEEEEECCCCCCCEECCCCC
TVERDGLQELLSDMAYKQVSYVVVLNTSRLWRSDMAKVLIQRELKKHEVDVKAIEQSSYS
EEEHHHHHHHHHHHHHHHEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCE
IYTHDPNDFLVNGMLELLDQYQRLEIALKLSRGRKKKAERGGYAGGGVLFGYKAKKGQKV
EEEECCCHHHHHHHHHHHHHHHHHHHHEEHHCCCHHHHHCCCCCCCCEEEEEECCCCCEE
LEVDAGKAVVVRRLFELRYIFKNWSFTQLAKQLNVEGYCTAKGKQFTKVQVKRMLDRENF
EEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHH
YRGMYKYGKIQTKGQHAAII
HHHHHHHCCEEECCCCCCCC
>Mature Secondary Structure 
GKKVVGYIRVSTEGQVRDGYSLAYQVEEIERYCNENNLELLRVYEDRGLSGATVDEEGL
CCEEEEEEEECCCCCCCCCHHHEEEHHHHHHHHCCCCEEEEEEEECCCCCCCEECCCCC
TVERDGLQELLSDMAYKQVSYVVVLNTSRLWRSDMAKVLIQRELKKHEVDVKAIEQSSYS
EEEHHHHHHHHHHHHHHHEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCE
IYTHDPNDFLVNGMLELLDQYQRLEIALKLSRGRKKKAERGGYAGGGVLFGYKAKKGQKV
EEEECCCHHHHHHHHHHHHHHHHHHHHEEHHCCCHHHHHCCCCCCCCEEEEEECCCCCEE
LEVDAGKAVVVRRLFELRYIFKNWSFTQLAKQLNVEGYCTAKGKQFTKVQVKRMLDRENF
EEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHH
YRGMYKYGKIQTKGQHAAII
HHHHHHHCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2105293; 7704261; 8969508; 9384377 [H]