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The map label for this gene is ykrA [H]

Identifier: 118477523

GI number: 118477523

Start: 1998758

End: 1999534

Strand: Direct

Name: ykrA [H]

Synonym: BALH_1848

Alternate gene names: 118477523

Gene position: 1998758-1999534 (Clockwise)

Preceding gene: 118477522

Following gene: 118477525

Centisome position: 38.02

GC content: 35.91

Gene sequence:

>777_bases
ATGTACAAAGTTGTATTTTTCGATGTTGATGGTACGCTTTTAAGTGAGATTGATAGAAGTATGCACGAAAGTACAAAAGA
AGCGATATACAGGTTAATAGATAAAGGGATTCACGTAGTTGTTACTACAGGGAGACCATATAGCTTATGTTCGCAATTTA
TGGAACTAGGCATAAATACGTTTATTTCTGCAAATGGTGCACATATCAAGTGTGGGGAAACAGTTATACATAAATCAGTA
CTTTCAAGTGAAATCGTTCATGATCTCTCAGAGTTTGCTGCATTACATGGTCACGGTGTTTCTTATTTTACAGAGGATTT
TGCAATGAACGGAATAGCCGCGCATAATGGACGTGTAATGCAAGCGCTTAGCGAGACGTTGAATTTAGAGAAGTATCCAG
AAAAAAGCAGGGATTTGTCAGAAGAAATCTATTGTTTATGTCTGTATGCAGATGAAATAGAAGCTCAAAAATTTCTTGAA
AGATATCCAGCTCTTACGTTTGAGCGTTTTCATAATTACGTTATAAATGTATTAGAAGATAGTAAAGTATCGAAATTAAC
TGCAATTCAAAAGGTATTAGAACACCTAAACATTTGTGGATCAGAAGCCATTGCTTTTGGTGACGGTAGAAATGATATTG
AGATGTTAGAGTATGTAGGATTAGGTATTGCGATGGGGAATGGCGGAGAAGAGTTAAAAACAAGAGCTGATTTCGTTACA
AAGAAGGCGAGTGAAGGTGGTATTTTATTTGCCTTAGAAAAGCATTATGTCGTCTAA

Upstream 100 bases:

>100_bases
AATGGGAGATACGGGAATAAGCTTAATTGAAATTGACGGTGAACAAAAAACGGTACATTTCATTAATGATACGAATCATT
TGCACGGGATGTAGAGAATT

Downstream 100 bases:

>100_bases
CGTACCTTTATTGAAATAAAGGTACGTTAGGATCTTTAATGTGCTCGCATAATAAAATATGTATTTGTCCACGATGATGA
TAAAAGTGTGCAACAATTTC

Product: HAD superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MYKVVFFDVDGTLLSEIDRSMHESTKEAIYRLIDKGIHVVVTTGRPYSLCSQFMELGINTFISANGAHIKCGETVIHKSV
LSSEIVHDLSEFAALHGHGVSYFTEDFAMNGIAAHNGRVMQALSETLNLEKYPEKSRDLSEEIYCLCLYADEIEAQKFLE
RYPALTFERFHNYVINVLEDSKVSKLTAIQKVLEHLNICGSEAIAFGDGRNDIEMLEYVGLGIAMGNGGEELKTRADFVT
KKASEGGILFALEKHYVV

Sequences:

>Translated_258_residues
MYKVVFFDVDGTLLSEIDRSMHESTKEAIYRLIDKGIHVVVTTGRPYSLCSQFMELGINTFISANGAHIKCGETVIHKSV
LSSEIVHDLSEFAALHGHGVSYFTEDFAMNGIAAHNGRVMQALSETLNLEKYPEKSRDLSEEIYCLCLYADEIEAQKFLE
RYPALTFERFHNYVINVLEDSKVSKLTAIQKVLEHLNICGSEAIAFGDGRNDIEMLEYVGLGIAMGNGGEELKTRADFVT
KKASEGGILFALEKHYVV
>Mature_258_residues
MYKVVFFDVDGTLLSEIDRSMHESTKEAIYRLIDKGIHVVVTTGRPYSLCSQFMELGINTFISANGAHIKCGETVIHKSV
LSSEIVHDLSEFAALHGHGVSYFTEDFAMNGIAAHNGRVMQALSETLNLEKYPEKSRDLSEEIYCLCLYADEIEAQKFLE
RYPALTFERFHNYVINVLEDSKVSKLTAIQKVLEHLNICGSEAIAFGDGRNDIEMLEYVGLGIAMGNGGEELKTRADFVT
KKASEGGILFALEKHYVV

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=268, Percent_Identity=28.7313432835821, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1786982, Length=259, Percent_Identity=27.4131274131274, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 28815; Mature: 28815

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS01228 COF_1 ; PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKVVFFDVDGTLLSEIDRSMHESTKEAIYRLIDKGIHVVVTTGRPYSLCSQFMELGINT
CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCHHH
FISANGAHIKCGETVIHKSVLSSEIVHDLSEFAALHGHGVSYFTEDFAMNGIAAHNGRVM
EEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEECCCCHHH
QALSETLNLEKYPEKSRDLSEEIYCLCLYADEIEAQKFLERYPALTFERFHNYVINVLED
HHHHHHHCCCCCCCHHCCCCHHHEEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
SKVSKLTAIQKVLEHLNICGSEAIAFGDGRNDIEMLEYVGLGIAMGNGGEELKTRADFVT
CHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCEEEECCCCHHHHHHHHHHH
KKASEGGILFALEKHYVV
HCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MYKVVFFDVDGTLLSEIDRSMHESTKEAIYRLIDKGIHVVVTTGRPYSLCSQFMELGINT
CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCHHH
FISANGAHIKCGETVIHKSVLSSEIVHDLSEFAALHGHGVSYFTEDFAMNGIAAHNGRVM
EEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEECCCCHHH
QALSETLNLEKYPEKSRDLSEEIYCLCLYADEIEAQKFLERYPALTFERFHNYVINVLED
HHHHHHHCCCCCCCHHCCCCHHHEEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
SKVSKLTAIQKVLEHLNICGSEAIAFGDGRNDIEMLEYVGLGIAMGNGGEELKTRADFVT
CHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCEEEECCCCHHHHHHHHHHH
KKASEGGILFALEKHYVV
HCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]