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The map label for this gene is oppA [H]

Identifier: 118477479

GI number: 118477479

Start: 1957603

End: 1959279

Strand: Direct

Name: oppA [H]

Synonym: BALH_1801

Alternate gene names: 118477479

Gene position: 1957603-1959279 (Clockwise)

Preceding gene: 118477478

Following gene: 118477480

Centisome position: 37.24

GC content: 34.53

Gene sequence:

>1677_bases
TTGGGGGAAGGAAGAATGAAGAGAAAGGTAACAACGATTGCTGCAGTTGCATTATCGACTAGTGTATTAGTTGCAGGTTG
CGGAAATGGGGAGAAGGCATCTACAACGAAGAAAGAAGCAGGTAAGGGAGCAGCGGATAAGCAAGTATTAAACTTACTAG
AAACAGCAGAAATTCCTTCAATGGATACGTCAAAATCAACAGACTCTGTATCATTCCGTGCCTTTGTAAATGCAATGGAA
GGATTATATCGTTTAGATAAGGATAATAAACCAACTCCAGGTATGGCAAAAGATGTGAAAATTAGTGAAGATAAAAAAAC
ATATACATTTGAATTACGAGACGCAAAGTGGTCTAATGGCGATCCAGTTCGAGCGCAAGATTTTGTATATGCATGGCAAC
GTACATTAGATAAAGCAACGGCAGCTGAGTATGCATTTATTTTATTTGATGTAAAGAATGCACAGAAAGTCAATAAAGGA
GAATTACCGTTAGATCAATTAGGGGTGAAAGCGAAGGATGATAAAACATTAGTAGTAGAATTAGAACAACCAGCACCATA
TTTCCTTGAGCTTACTTCATTCCCAACATTTTTCCCTTTAAATGAAAAATATGTGAAAGAACAAGGGGATAAATATGCAT
TAGAAGCAGATAAACTATTATACAATGGCCCATTTGTAATGAGTGAATGGAAACATGAACGAAGTTATCAGTTAAAGAAA
AATCCTAATTATTGGGATAAAGATACTGTGAAATTAGAAGAAATTAATGTGAATATTGTAAAGGAAACGAGCACGGGAGT
AAATTTATATGATAGTGATCAAGCAGACCGAGTTATTTTAAGTTCTGAATTTGTTGATAAATATAAAAAGAATAAACCAG
ATGAATTTAAAACGAAGTTAGATCCGCGTATGTATTTCTTACGCTTTAACCAGAAGAATGCAACGTTTAAAAACCAAAAA
GTTCGTGAAGCGATTGATCTGGCATATGATAAAAAAGGAATTGCAAACGTTATTTTAAATGATGGATCATTGCCAGCATA
CTTCCTAGTACCTGAAAAATTTACGACAGGACCAGATGGGAAAGATTTCCGTTCTGTAAATAAAAATTTCCGTGACAGTA
AAGATAATGCAGCAAAAGCAAAAAAACTATGGGAAGAAGCGAAGAAAGAACTTGGTCAAGATACAATCACAGTAGAATTA
CTAAATGATGACAACGGTAGTCGGAAAAAAGTAGGAGACTTTATTAAAGAAGAGTTAGAGAAAAACTTACCTGGTATTAA
AGTGAATTTAAAACAACAGCCATATAAGCAGAAGTTAGATTTAGAAAAGAAATTTGAATATGAATTCTCTTTATCTGCAT
GGAGTCCAGATTATCCAGATCCAATGACTTATATTGATATGTTCGTTACGGGAAGCTCATTTAATGAAATGGATTATTCT
AATCCGAAGTATGATGAGTTAGTAGCGAAATCAAAAGGAGAGCTATTAAAAGATGATAAAGCACGCTGGAATGCACTAGC
AGAAGCTGAAAAAATCTTAATTGGTCAAGATGCTGCCATTTCTCCTACGTACCAACAAAGTACCGCATACTTAGAGAAAC
CATACGTAAAAGGTATTGCAAATCATACGTTTGGTGGGGACTTCAGTTATAAATGGGCATATATTACAAAAAAATAG

Upstream 100 bases:

>100_bases
TATCCACTTCTTTTTTGTGTATACGAAAATAATATTTGAAATAATCTGAATCTTTTGTATAATAATATATATTATACTGG
CTTTCATTTATACATATAGA

Downstream 100 bases:

>100_bases
TATAATAAAAGATGAGTGAATTTTCGCTCATCTTTTATTTGTATAGGAGGAATTAGAGTTGTTAAAAGGAATCAATCATC
TTTGTTTTTCAGTATCTAAT

Product: oligopeptide transporter, periplasmic-binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 558; Mature: 557

Protein sequence:

>558_residues
MGEGRMKRKVTTIAAVALSTSVLVAGCGNGEKASTTKKEAGKGAADKQVLNLLETAEIPSMDTSKSTDSVSFRAFVNAME
GLYRLDKDNKPTPGMAKDVKISEDKKTYTFELRDAKWSNGDPVRAQDFVYAWQRTLDKATAAEYAFILFDVKNAQKVNKG
ELPLDQLGVKAKDDKTLVVELEQPAPYFLELTSFPTFFPLNEKYVKEQGDKYALEADKLLYNGPFVMSEWKHERSYQLKK
NPNYWDKDTVKLEEINVNIVKETSTGVNLYDSDQADRVILSSEFVDKYKKNKPDEFKTKLDPRMYFLRFNQKNATFKNQK
VREAIDLAYDKKGIANVILNDGSLPAYFLVPEKFTTGPDGKDFRSVNKNFRDSKDNAAKAKKLWEEAKKELGQDTITVEL
LNDDNGSRKKVGDFIKEELEKNLPGIKVNLKQQPYKQKLDLEKKFEYEFSLSAWSPDYPDPMTYIDMFVTGSSFNEMDYS
NPKYDELVAKSKGELLKDDKARWNALAEAEKILIGQDAAISPTYQQSTAYLEKPYVKGIANHTFGGDFSYKWAYITKK

Sequences:

>Translated_558_residues
MGEGRMKRKVTTIAAVALSTSVLVAGCGNGEKASTTKKEAGKGAADKQVLNLLETAEIPSMDTSKSTDSVSFRAFVNAME
GLYRLDKDNKPTPGMAKDVKISEDKKTYTFELRDAKWSNGDPVRAQDFVYAWQRTLDKATAAEYAFILFDVKNAQKVNKG
ELPLDQLGVKAKDDKTLVVELEQPAPYFLELTSFPTFFPLNEKYVKEQGDKYALEADKLLYNGPFVMSEWKHERSYQLKK
NPNYWDKDTVKLEEINVNIVKETSTGVNLYDSDQADRVILSSEFVDKYKKNKPDEFKTKLDPRMYFLRFNQKNATFKNQK
VREAIDLAYDKKGIANVILNDGSLPAYFLVPEKFTTGPDGKDFRSVNKNFRDSKDNAAKAKKLWEEAKKELGQDTITVEL
LNDDNGSRKKVGDFIKEELEKNLPGIKVNLKQQPYKQKLDLEKKFEYEFSLSAWSPDYPDPMTYIDMFVTGSSFNEMDYS
NPKYDELVAKSKGELLKDDKARWNALAEAEKILIGQDAAISPTYQQSTAYLEKPYVKGIANHTFGGDFSYKWAYITKK
>Mature_557_residues
GEGRMKRKVTTIAAVALSTSVLVAGCGNGEKASTTKKEAGKGAADKQVLNLLETAEIPSMDTSKSTDSVSFRAFVNAMEG
LYRLDKDNKPTPGMAKDVKISEDKKTYTFELRDAKWSNGDPVRAQDFVYAWQRTLDKATAAEYAFILFDVKNAQKVNKGE
LPLDQLGVKAKDDKTLVVELEQPAPYFLELTSFPTFFPLNEKYVKEQGDKYALEADKLLYNGPFVMSEWKHERSYQLKKN
PNYWDKDTVKLEEINVNIVKETSTGVNLYDSDQADRVILSSEFVDKYKKNKPDEFKTKLDPRMYFLRFNQKNATFKNQKV
REAIDLAYDKKGIANVILNDGSLPAYFLVPEKFTTGPDGKDFRSVNKNFRDSKDNAAKAKKLWEEAKKELGQDTITVELL
NDDNGSRKKVGDFIKEELEKNLPGIKVNLKQQPYKQKLDLEKKFEYEFSLSAWSPDYPDPMTYIDMFVTGSSFNEMDYSN
PKYDELVAKSKGELLKDDKARWNALAEAEKILIGQDAAISPTYQQSTAYLEKPYVKGIANHTFGGDFSYKWAYITKK

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the binding of dipeptides with high affinity. Is expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787495, Length=536, Percent_Identity=30.410447761194, Blast_Score=228, Evalue=1e-60,
Organism=Escherichia coli, GI1789397, Length=508, Percent_Identity=28.3464566929134, Blast_Score=207, Evalue=2e-54,
Organism=Escherichia coli, GI87081878, Length=540, Percent_Identity=29.0740740740741, Blast_Score=205, Evalue=6e-54,
Organism=Escherichia coli, GI1787762, Length=550, Percent_Identity=24.1818181818182, Blast_Score=91, Evalue=3e-19,
Organism=Escherichia coli, GI1787052, Length=479, Percent_Identity=22.7557411273486, Blast_Score=73, Evalue=6e-14,

Paralogues:

None

Copy number: 760 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2360 Molecules/Cell In: Stationary-Phase,

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 63458; Mature: 63327

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEGRMKRKVTTIAAVALSTSVLVAGCGNGEKASTTKKEAGKGAADKQVLNLLETAEIPS
CCCCHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCHHHCCCCCHHHHHHHHHHHHCCCC
MDTSKSTDSVSFRAFVNAMEGLYRLDKDNKPTPGMAKDVKISEDKKTYTFELRDAKWSNG
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCCCCC
DPVRAQDFVYAWQRTLDKATAAEYAFILFDVKNAQKVNKGELPLDQLGVKAKDDKTLVVE
CCCCHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCCCCCCHHHHCCCCCCCCEEEEE
LEQPAPYFLELTSFPTFFPLNEKYVKEQGDKYALEADKLLYNGPFVMSEWKHERSYQLKK
ECCCCCEEEEECCCCCCCCCCHHHHHHCCCEEEEECCCEEECCCEEEHHHCCCCCEEECC
NPNYWDKDTVKLEEINVNIVKETSTGVNLYDSDQADRVILSSEFVDKYKKNKPDEFKTKL
CCCCCCCCCEEEEEEEEEEEEECCCCCEEECCCCCCEEEEEHHHHHHHHCCCCHHHHHCC
DPRMYFLRFNQKNATFKNQKVREAIDLAYDKKGIANVILNDGSLPAYFLVPEKFTTGPDG
CCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCCCCCC
KDFRSVNKNFRDSKDNAAKAKKLWEEAKKELGQDTITVELLNDDNGSRKKVGDFIKEELE
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHH
KNLPGIKVNLKQQPYKQKLDLEKKFEYEFSLSAWSPDYPDPMTYIDMFVTGSSFNEMDYS
HCCCCEEEECCCCCCHHHCCCCHHCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCC
NPKYDELVAKSKGELLKDDKARWNALAEAEKILIGQDAAISPTYQQSTAYLEKPYVKGIA
CCCHHHHHHHCCCCHHCCCHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHCHHHHHHH
NHTFGGDFSYKWAYITKK
CCCCCCCCEEEEEEEECC
>Mature Secondary Structure 
GEGRMKRKVTTIAAVALSTSVLVAGCGNGEKASTTKKEAGKGAADKQVLNLLETAEIPS
CCCHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCHHHCCCCCHHHHHHHHHHHHCCCC
MDTSKSTDSVSFRAFVNAMEGLYRLDKDNKPTPGMAKDVKISEDKKTYTFELRDAKWSNG
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCCCCC
DPVRAQDFVYAWQRTLDKATAAEYAFILFDVKNAQKVNKGELPLDQLGVKAKDDKTLVVE
CCCCHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCCCCCCHHHHCCCCCCCCEEEEE
LEQPAPYFLELTSFPTFFPLNEKYVKEQGDKYALEADKLLYNGPFVMSEWKHERSYQLKK
ECCCCCEEEEECCCCCCCCCCHHHHHHCCCEEEEECCCEEECCCEEEHHHCCCCCEEECC
NPNYWDKDTVKLEEINVNIVKETSTGVNLYDSDQADRVILSSEFVDKYKKNKPDEFKTKL
CCCCCCCCCEEEEEEEEEEEEECCCCCEEECCCCCCEEEEEHHHHHHHHCCCCHHHHHCC
DPRMYFLRFNQKNATFKNQKVREAIDLAYDKKGIANVILNDGSLPAYFLVPEKFTTGPDG
CCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCCCCCC
KDFRSVNKNFRDSKDNAAKAKKLWEEAKKELGQDTITVELLNDDNGSRKKVGDFIKEELE
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHH
KNLPGIKVNLKQQPYKQKLDLEKKFEYEFSLSAWSPDYPDPMTYIDMFVTGSSFNEMDYS
HCCCCEEEECCCCCCHHHCCCCHHCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCC
NPKYDELVAKSKGELLKDDKARWNALAEAEKILIGQDAAISPTYQQSTAYLEKPYVKGIA
CCCHHHHHHHCCCCHHCCCHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHCHHHHHHH
NHTFGGDFSYKWAYITKK
CCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377 [H]