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The map label for this gene is yjiA [H]

Identifier: 118477469

GI number: 118477469

Start: 1947994

End: 1948953

Strand: Direct

Name: yjiA [H]

Synonym: BALH_1791

Alternate gene names: 118477469

Gene position: 1947994-1948953 (Clockwise)

Preceding gene: 118477467

Following gene: 118477475

Centisome position: 37.05

GC content: 33.65

Gene sequence:

>960_bases
ATGTACGAAATGATTCCAGTAACAATATTAACTGGTTTTCTTGGATCTGGGAAAACAACATTATTAAATCGTATTTTAAC
AGAGAATCACGGTAAGAAATTGGCGGTAATTGTAAATGAAATAGGGCAAATTGGCATTGATAATCAGTTGATTATGAATG
TTGAAGAAGAAATTATGGAAATGACAAACGGTTGTTTATGCTGTACTGTACGGGAAGATTTACTCGTTGCGTTAAAACAA
TTACTGGATGTAAAAGCAGAAGGGAAAATGGACTTTGATGGATTAGTAATTGAAACAACTGGTCTTGCAAATCCAGGTCC
TATTATTCAAACATTCTTTTTAGATCCTGTTATTCAATCTGCATACCAAATTAATGGTGTTGTAACAGTAGTAGATAGTT
ATCATATACATAAACATTTTGAAAAAGGACTAGAAGCAAAAGAACAAATTGCATTTGCCGATGTTGTATTAGTGAATAAG
TTAGATTTAATTGAAGAGAGCGAAAAAGAAAACCTCTTACATGAACTGCAAGGAATAAACCCGACTGCAAAGTTAATTCA
GTCGACTCACTGTGATGTAGATATTCCATCGTTATTAAAAATTCAAACGTTTAAAACGAAAGATACGTTACAAATTTATC
CTCATAAAGAGCATAATCATCTAGAAGGTGTAAAATCGTTTGTACTACGTGAAGAGCGTCCGTTAGATTTACAAAAACTA
AATGAGTGGATGTCAGCTGTCGTTCAAGAACTGGGAGAATACTTATATCGCTACAAAGGAATTTTATCGATTGATGGAGT
GGATAAACGTATCGTTTTTCAAGGTGTACATACGTTATTTGCTGCTTCGTATGATAGAGAGTGGCAAGAGGGAGAAGATC
GAGTAAGTGAAGTTGTTTTTATCGGAAAAGATATTAATAAAGAATGGTTCCAAGCACATTTCGAGGAGTGTGTGAAATAA

Upstream 100 bases:

>100_bases
TTATTATATAGTTAGAGGGGCGTACAAACAATAAATATGTTTTGCTACAAAAACGATTATAGCTATATGTTATAATGTAA
AAACATATAGCTATAAGGAG

Downstream 100 bases:

>100_bases
GTCTGCGTTTATTGCAGGCTTATTTTTTGGACTTAACTAAGTGTTTTGTAGAAAAATACTAGATTGCCAAAAACGAAGGA
CTAAAAAAACCTGTTTTCAC

Product: cobalamin synthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MYEMIPVTILTGFLGSGKTTLLNRILTENHGKKLAVIVNEIGQIGIDNQLIMNVEEEIMEMTNGCLCCTVREDLLVALKQ
LLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQSAYQINGVVTVVDSYHIHKHFEKGLEAKEQIAFADVVLVNK
LDLIEESEKENLLHELQGINPTAKLIQSTHCDVDIPSLLKIQTFKTKDTLQIYPHKEHNHLEGVKSFVLREERPLDLQKL
NEWMSAVVQELGEYLYRYKGILSIDGVDKRIVFQGVHTLFAASYDREWQEGEDRVSEVVFIGKDINKEWFQAHFEECVK

Sequences:

>Translated_319_residues
MYEMIPVTILTGFLGSGKTTLLNRILTENHGKKLAVIVNEIGQIGIDNQLIMNVEEEIMEMTNGCLCCTVREDLLVALKQ
LLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQSAYQINGVVTVVDSYHIHKHFEKGLEAKEQIAFADVVLVNK
LDLIEESEKENLLHELQGINPTAKLIQSTHCDVDIPSLLKIQTFKTKDTLQIYPHKEHNHLEGVKSFVLREERPLDLQKL
NEWMSAVVQELGEYLYRYKGILSIDGVDKRIVFQGVHTLFAASYDREWQEGEDRVSEVVFIGKDINKEWFQAHFEECVK
>Mature_319_residues
MYEMIPVTILTGFLGSGKTTLLNRILTENHGKKLAVIVNEIGQIGIDNQLIMNVEEEIMEMTNGCLCCTVREDLLVALKQ
LLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQSAYQINGVVTVVDSYHIHKHFEKGLEAKEQIAFADVVLVNK
LDLIEESEKENLLHELQGINPTAKLIQSTHCDVDIPSLLKIQTFKTKDTLQIYPHKEHNHLEGVKSFVLREERPLDLQKL
NEWMSAVVQELGEYLYRYKGILSIDGVDKRIVFQGVHTLFAASYDREWQEGEDRVSEVVFIGKDINKEWFQAHFEECVK

Specific function: Binds GTP. May function as GTP-dependent regulator [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI148727351, Length=343, Percent_Identity=33.5276967930029, Blast_Score=176, Evalue=3e-44,
Organism=Homo sapiens, GI33469141, Length=342, Percent_Identity=32.4561403508772, Blast_Score=174, Evalue=8e-44,
Organism=Homo sapiens, GI126722884, Length=343, Percent_Identity=33.2361516034985, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI146231952, Length=336, Percent_Identity=32.1428571428571, Blast_Score=173, Evalue=2e-43,
Organism=Homo sapiens, GI223941779, Length=332, Percent_Identity=32.5301204819277, Blast_Score=163, Evalue=2e-40,
Organism=Homo sapiens, GI223941776, Length=333, Percent_Identity=31.8318318318318, Blast_Score=156, Evalue=2e-38,
Organism=Homo sapiens, GI119120938, Length=320, Percent_Identity=32.1875, Blast_Score=147, Evalue=2e-35,
Organism=Homo sapiens, GI310124603, Length=227, Percent_Identity=25.5506607929515, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI87082430, Length=318, Percent_Identity=40.8805031446541, Blast_Score=218, Evalue=4e-58,
Organism=Escherichia coli, GI1788499, Length=193, Percent_Identity=32.1243523316062, Blast_Score=89, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6324356, Length=357, Percent_Identity=30.5322128851541, Blast_Score=128, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 36267; Mature: 36267

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEMIPVTILTGFLGSGKTTLLNRILTENHGKKLAVIVNEIGQIGIDNQLIMNVEEEIME
CCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHH
MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS
HHCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH
AYQINGVVTVVDSYHIHKHFEKGLEAKEQIAFADVVLVNKLDLIEESEKENLLHELQGIN
HHHHCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PTAKLIQSTHCDVDIPSLLKIQTFKTKDTLQIYPHKEHNHLEGVKSFVLREERPLDLQKL
HHHHHHHHCCCCCCCCHHHEEEEECCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCHHHH
NEWMSAVVQELGEYLYRYKGILSIDGVDKRIVFQGVHTLFAASYDREWQEGEDRVSEVVF
HHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEE
IGKDINKEWFQAHFEECVK
ECCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MYEMIPVTILTGFLGSGKTTLLNRILTENHGKKLAVIVNEIGQIGIDNQLIMNVEEEIME
CCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHH
MTNGCLCCTVREDLLVALKQLLDVKAEGKMDFDGLVIETTGLANPGPIIQTFFLDPVIQS
HHCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH
AYQINGVVTVVDSYHIHKHFEKGLEAKEQIAFADVVLVNKLDLIEESEKENLLHELQGIN
HHHHCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PTAKLIQSTHCDVDIPSLLKIQTFKTKDTLQIYPHKEHNHLEGVKSFVLREERPLDLQKL
HHHHHHHHCCCCCCCCHHHEEEEECCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCHHHH
NEWMSAVVQELGEYLYRYKGILSIDGVDKRIVFQGVHTLFAASYDREWQEGEDRVSEVVF
HHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEE
IGKDINKEWFQAHFEECVK
ECCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 1650347 [H]