| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is ymfD [H]
Identifier: 118477440
GI number: 118477440
Start: 1918306
End: 1919610
Strand: Direct
Name: ymfD [H]
Synonym: BALH_1760
Alternate gene names: 118477440
Gene position: 1918306-1919610 (Clockwise)
Preceding gene: 118477439
Following gene: 118477442
Centisome position: 36.49
GC content: 36.48
Gene sequence:
>1305_bases ATGAAAAATTACGTTCCAGCAGGGCTATTACATGGTAAGAAATATATGATGAAAGGTTTCGAAGCCAACATGTTAAAAAA AGAAAACTGTTGTTTAATTGCGCTTGCATCAGTTCCACTTGTTATGACATTAGGGAATTCAATGCTCATTCCAATCCTGC CGACAATTGAAAAAAAATTACATATTTCATCGTTTCAAGTATCCATGATTATTACAATTTACTCTATCGTAGCCATTCTA CTTATACCGATTGCTGGTTATTTATCAGATCGATGGGGGAGAAAGATGGTAATGGTTCCGAGTTTGCTGATTGCGGCTAT AGGAGGAGCGATAACTGGTTGGGTATCTTGGAAAGTTGATAATCCCTACACTTGGATATTGATTGGTAGAGCGATTCAAG GTATTGGTGCTGCTGGTGCAATGCCAGTTGTTATACCGTGTGTTGGTGATTTATACAAGGATGAAAAACAAGTTAGTACA GGTTTAGGAATCATAGAAACATCCAATACATTTGGGAAAGTGTTGAGCCCTATTTTAGGATCTGCTCTTGCTGCCATTGT ATGGTTCTTACCATTTTGGGCGATTCCAGTTTTATGCATAGTATCAATTGTTTTATTACTTGTTCTAGTAAAGGCAAAGA AACAAGAAGGAGAAGTACCGCCACTTAAAGAGTTTATCAAATCTATTGTCGCTACGTTTCGAGAAAAGGGAAGATGGTTG ATTGCCATTTTTGCATTAGGTGCAATTATTATGCTTATTTTATTCGGAATTCTCTTTTATTTGTCAACTATATTGGAATC AAAGTATGACATTCATGGTATATGGAAAGGGTGTGTACTTGCGATTCCGTTACTTGTACTGTCACTTAGTTCATATATGG CTGGTAAAAAAATTGGAGATAATCAAAATGTGATGAAGAAGTGTATTTATATTGGTTTTTTAATGGCTGCTGCATCAGTT ATCATTCCTTTATTTATAAAAGGGATTTATTTACTACTTCTTTGTCTCGTTATTATGGGGATAGGAATTGGTATGGCACT CCCATGTTTAGATGCTCTCATTACACAAGGGATTGAAAAGGAGCAAAGGGGAACGGTTACGTCATTTTATAGTTCTATGC GATTTATCGGTGTAGCAGCTGGACCACCTCTATACTCTTTTTTCATGAAAGGTACTGACCATGAAGTGTTTTATTTAACA AGTATTTTCGCTGCTATCGGTGCTGTTATAGCGATCATTTGGATTAAACCAGCAAAAGATGCAAAGAACGTAAAACAGAA ACCGGAACCGGAACCTACTTCATAA
Upstream 100 bases:
>100_bases ATATTGTGAACTGGACTCAAAGAATAGGAATAATACTATGTTTTCCCCAATTTCTTTTGTTGTGAATGGGAAGTAGTAAA GATGTAATAGCCCTGGTGGA
Downstream 100 bases:
>100_bases TTTGAAAGAGAATTGCATGATGTTTTCAGTAACATGCAATTCTCTTTCGTTCATTAAGAATAAATAACTTGTTTTAACAT ATAAAGCGCGACACCCCATA
Product: multidrug resistance protein
Products: Proton [Cytoplasm]; drug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MKNYVPAGLLHGKKYMMKGFEANMLKKENCCLIALASVPLVMTLGNSMLIPILPTIEKKLHISSFQVSMIITIYSIVAIL LIPIAGYLSDRWGRKMVMVPSLLIAAIGGAITGWVSWKVDNPYTWILIGRAIQGIGAAGAMPVVIPCVGDLYKDEKQVST GLGIIETSNTFGKVLSPILGSALAAIVWFLPFWAIPVLCIVSIVLLLVLVKAKKQEGEVPPLKEFIKSIVATFREKGRWL IAIFALGAIIMLILFGILFYLSTILESKYDIHGIWKGCVLAIPLLVLSLSSYMAGKKIGDNQNVMKKCIYIGFLMAAASV IIPLFIKGIYLLLLCLVIMGIGIGMALPCLDALITQGIEKEQRGTVTSFYSSMRFIGVAAGPPLYSFFMKGTDHEVFYLT SIFAAIGAVIAIIWIKPAKDAKNVKQKPEPEPTS
Sequences:
>Translated_434_residues MKNYVPAGLLHGKKYMMKGFEANMLKKENCCLIALASVPLVMTLGNSMLIPILPTIEKKLHISSFQVSMIITIYSIVAIL LIPIAGYLSDRWGRKMVMVPSLLIAAIGGAITGWVSWKVDNPYTWILIGRAIQGIGAAGAMPVVIPCVGDLYKDEKQVST GLGIIETSNTFGKVLSPILGSALAAIVWFLPFWAIPVLCIVSIVLLLVLVKAKKQEGEVPPLKEFIKSIVATFREKGRWL IAIFALGAIIMLILFGILFYLSTILESKYDIHGIWKGCVLAIPLLVLSLSSYMAGKKIGDNQNVMKKCIYIGFLMAAASV IIPLFIKGIYLLLLCLVIMGIGIGMALPCLDALITQGIEKEQRGTVTSFYSSMRFIGVAAGPPLYSFFMKGTDHEVFYLT SIFAAIGAVIAIIWIKPAKDAKNVKQKPEPEPTS >Mature_434_residues MKNYVPAGLLHGKKYMMKGFEANMLKKENCCLIALASVPLVMTLGNSMLIPILPTIEKKLHISSFQVSMIITIYSIVAIL LIPIAGYLSDRWGRKMVMVPSLLIAAIGGAITGWVSWKVDNPYTWILIGRAIQGIGAAGAMPVVIPCVGDLYKDEKQVST GLGIIETSNTFGKVLSPILGSALAAIVWFLPFWAIPVLCIVSIVLLLVLVKAKKQEGEVPPLKEFIKSIVATFREKGRWL IAIFALGAIIMLILFGILFYLSTILESKYDIHGIWKGCVLAIPLLVLSLSSYMAGKKIGDNQNVMKKCIYIGFLMAAASV IIPLFIKGIYLLLLCLVIMGIGIGMALPCLDALITQGIEKEQRGTVTSFYSSMRFIGVAAGPPLYSFFMKGTDHEVFYLT SIFAAIGAVIAIIWIKPAKDAKNVKQKPEPEPTS
Specific function: Involved in secretion of bacillibactin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR001958 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47274; Mature: 47274
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNYVPAGLLHGKKYMMKGFEANMLKKENCCLIALASVPLVMTLGNSMLIPILPTIEKKL CCCCCCHHHHHHHHHHHCCCHHCCCCCCCCEEEEHHHHHHHHHCCCCEEEECHHHHHHHH HISSFQVSMIITIYSIVAILLIPIAGYLSDRWGRKMVMVPSLLIAAIGGAITGWVSWKVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHEEEEEEC NPYTWILIGRAIQGIGAAGAMPVVIPCVGDLYKDEKQVSTGLGIIETSNTFGKVLSPILG CCEEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHH SALAAIVWFLPFWAIPVLCIVSIVLLLVLVKAKKQEGEVPPLKEFIKSIVATFREKGRWL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEE IAIFALGAIIMLILFGILFYLSTILESKYDIHGIWKGCVLAIPLLVLSLSSYMAGKKIGD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC NQNVMKKCIYIGFLMAAASVIIPLFIKGIYLLLLCLVIMGIGIGMALPCLDALITQGIEK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH EQRGTVTSFYSSMRFIGVAAGPPLYSFFMKGTDHEVFYLTSIFAAIGAVIAIIWIKPAKD HHCCHHHHHHHHHHHEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC AKNVKQKPEPEPTS HHHHCCCCCCCCCC >Mature Secondary Structure MKNYVPAGLLHGKKYMMKGFEANMLKKENCCLIALASVPLVMTLGNSMLIPILPTIEKKL CCCCCCHHHHHHHHHHHCCCHHCCCCCCCCEEEEHHHHHHHHHCCCCEEEECHHHHHHHH HISSFQVSMIITIYSIVAILLIPIAGYLSDRWGRKMVMVPSLLIAAIGGAITGWVSWKVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHEEEEEEC NPYTWILIGRAIQGIGAAGAMPVVIPCVGDLYKDEKQVSTGLGIIETSNTFGKVLSPILG CCEEEEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHH SALAAIVWFLPFWAIPVLCIVSIVLLLVLVKAKKQEGEVPPLKEFIKSIVATFREKGRWL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEE IAIFALGAIIMLILFGILFYLSTILESKYDIHGIWKGCVLAIPLLVLSLSSYMAGKKIGD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC NQNVMKKCIYIGFLMAAASVIIPLFIKGIYLLLLCLVIMGIGIGMALPCLDALITQGIEK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH EQRGTVTSFYSSMRFIGVAAGPPLYSFFMKGTDHEVFYLTSIFAAIGAVIAIIWIKPAKD HHCCHHHHHHHHHHHEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC AKNVKQKPEPEPTS HHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]