| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
Click here to switch to the map view.
The map label for this gene is sapB [H]
Identifier: 118477431
GI number: 118477431
Start: 1909121
End: 1909801
Strand: Direct
Name: sapB [H]
Synonym: BALH_1751
Alternate gene names: 118477431
Gene position: 1909121-1909801 (Clockwise)
Preceding gene: 118477430
Following gene: 118477432
Centisome position: 36.32
GC content: 34.65
Gene sequence:
>681_bases ATGTCATATGAATTTTTACTCAAATTAGGTTTAGCACTCTTTTTAGGATTATTCATCGGGATAGATAGGCAGCTAAAGAA TAAACCGCTTGGTGTGAAAACAAGTATGGTTATTTCTGTAGCAAGTTGTTTAATTACGATGGTTTCAATTGAATCCGTAC ATGTATATTCTGTTCCAGGGCATACAAATATGGATCCCATGCGTTTAGCTGCTCAAATTGTGAGCGGAATTGGTTTTCTT GGGGCAGGTGTTATTTTACGAAGAAGTAATGACGTTATTTCTGGATTAACGACCGCCTCTATGGTGTGGGCTGCTTCAGC TTTAGGTATTGCGATTGGAGCAGGATTTTATTTACAAGCGACGGTTGCTATGATTTTAATTATTTTAGCAATTAATGTAC TTCCGCAACTTGTGAAAATTGCAGGACCGTATTCATTAAGACAAAAAGATTTATCTATAAAAATTACTGTAAAAGAGCAT CATGAGTTGGATGGTATATTTAAGCAAATTAAAAATTTAGGTATGCATGTAAAACGAGTGAAGATTAAAGATATAGATAG TGGAGCATTTCAGCAATTGGAGATGGTTATTTTAGCTCCAGAAGATTTATATACAACTGAGCTGTATAGTTCACTAAAAG AGATAGATCGTGTTGTTTCAGTTGAAGTGGAAAGTAGATAA
Upstream 100 bases:
>100_bases TTTTTACGTTAAATGAATAGAAAAGACTGGAATTGATATCATAAAAGAGTTATAGTGAATTATTCCAAGGGAAACATTGT AAAGTAAGGAGAATGGAAAT
Downstream 100 bases:
>100_bases TTGTAAGAAAAAAGGGTGAAGTAAATTCACTCTTTTTTATTTGGTTTTTTAAGGGGAAAATTGATATGATGATGAGTAAA CAAGGGGGGAGAGAATGATG
Product: MgtC/SapB family membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MSYEFLLKLGLALFLGLFIGIDRQLKNKPLGVKTSMVISVASCLITMVSIESVHVYSVPGHTNMDPMRLAAQIVSGIGFL GAGVILRRSNDVISGLTTASMVWAASALGIAIGAGFYLQATVAMILIILAINVLPQLVKIAGPYSLRQKDLSIKITVKEH HELDGIFKQIKNLGMHVKRVKIKDIDSGAFQQLEMVILAPEDLYTTELYSSLKEIDRVVSVEVESR
Sequences:
>Translated_226_residues MSYEFLLKLGLALFLGLFIGIDRQLKNKPLGVKTSMVISVASCLITMVSIESVHVYSVPGHTNMDPMRLAAQIVSGIGFL GAGVILRRSNDVISGLTTASMVWAASALGIAIGAGFYLQATVAMILIILAINVLPQLVKIAGPYSLRQKDLSIKITVKEH HELDGIFKQIKNLGMHVKRVKIKDIDSGAFQQLEMVILAPEDLYTTELYSSLKEIDRVVSVEVESR >Mature_225_residues SYEFLLKLGLALFLGLFIGIDRQLKNKPLGVKTSMVISVASCLITMVSIESVHVYSVPGHTNMDPMRLAAQIVSGIGFLG AGVILRRSNDVISGLTTASMVWAASALGIAIGAGFYLQATVAMILIILAINVLPQLVKIAGPYSLRQKDLSIKITVKEHH ELDGIFKQIKNLGMHVKRVKIKDIDSGAFQQLEMVILAPEDLYTTELYSSLKEIDRVVSVEVESR
Specific function: Unknown
COG id: COG1285
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MgtC/SapB family [H]
Homologues:
Organism=Escherichia coli, GI1789924, Length=173, Percent_Identity=33.5260115606936, Blast_Score=97, Evalue=7e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003416 [H]
Pfam domain/function: PF02308 MgtC [H]
EC number: NA
Molecular weight: Translated: 24654; Mature: 24523
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYEFLLKLGLALFLGLFIGIDRQLKNKPLGVKTSMVISVASCLITMVSIESVHVYSVPG CCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCEEEEEECCC HTNMDPMRLAAQIVSGIGFLGAGVILRRSNDVISGLTTASMVWAASALGIAIGAGFYLQA CCCCCHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH TVAMILIILAINVLPQLVKIAGPYSLRQKDLSIKITVKEHHELDGIFKQIKNLGMHVKRV HHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEE KIKDIDSGAFQQLEMVILAPEDLYTTELYSSLKEIDRVVSVEVESR EEEECCCHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHEEECCC >Mature Secondary Structure SYEFLLKLGLALFLGLFIGIDRQLKNKPLGVKTSMVISVASCLITMVSIESVHVYSVPG CHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCEEEEEECCC HTNMDPMRLAAQIVSGIGFLGAGVILRRSNDVISGLTTASMVWAASALGIAIGAGFYLQA CCCCCHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH TVAMILIILAINVLPQLVKIAGPYSLRQKDLSIKITVKEHHELDGIFKQIKNLGMHVKRV HHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEE KIKDIDSGAFQQLEMVILAPEDLYTTELYSSLKEIDRVVSVEVESR EEEECCCHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377; 9701819 [H]