Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
---|---|
Accession | NC_008600 |
Length | 5,257,091 |
Click here to switch to the map view.
The map label for this gene is 118477419
Identifier: 118477419
GI number: 118477419
Start: 1894321
End: 1894929
Strand: Reverse
Name: 118477419
Synonym: BALH_1739
Alternate gene names: NA
Gene position: 1894929-1894321 (Counterclockwise)
Preceding gene: 118477441
Following gene: 118477414
Centisome position: 36.05
GC content: 32.35
Gene sequence:
>609_bases ATGACAGAGTGGTTAACGATATTTGATTCTGAAAGAAATACACTTGGGAAGAAATTACGTGATGAAGTGCATCGTGACGG TAATTGGCACGAAACATTTCATTGTTGGTTTGTAGAAAAAGATGCTGAAGATATGTTTTTATATTTCCAATTACGCTCTA AAAATAAAAAAGAAGCTCCACTTATATGGGATATTACTTCAGCTGGACATATAATGCATGATGAAGATGTACAAATTGGC GGTCTTCGTGAAATTGAAGAAGAATTAGGCCTTTCCTTTCAAACGACTGATTTAGCATACAAAGGAATCTTTACAATAGA TTATGAAATTTCAAATCTTACGGATCGCGAGTTTTGTCATATGTATTTCCACAATGTCATCAATCCACTTCCATTCGCAC CAGGTGAAGAAGTAGACGATGTGATGAAAATACATGCAACTTCTTTTCTACAACTATTAAAAAGAGAGATTTCATCTTTT ACAGCTACTTCTGTTTTGAGCAATAAATCGATAACGATAACTTTTAGTGATATTTATCCATATGATTTTGCATACTATGA ATTTGTTGTAGAGCAAGGAAAAGAATTACTAAAAAATAATGATTTGTAA
Upstream 100 bases:
>100_bases CTTATTCTCTATTCCCACTAATACCGACCCCTTTTTTCTTTATTTTCCCAAAATTCAATACAAATATTGTATAATAAAGT TTGCAGAAAGGGGAATTAAA
Downstream 100 bases:
>100_bases TTAGACTAGGACCCCCTACCTATATCGGCTGGGAGTCCTATTTTTTATTATTGCTCAAGTGCCTTCAACCTTTTCTCTAC TCGTATGAATAAGCGAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MTEWLTIFDSERNTLGKKLRDEVHRDGNWHETFHCWFVEKDAEDMFLYFQLRSKNKKEAPLIWDITSAGHIMHDEDVQIG GLREIEEELGLSFQTTDLAYKGIFTIDYEISNLTDREFCHMYFHNVINPLPFAPGEEVDDVMKIHATSFLQLLKREISSF TATSVLSNKSITITFSDIYPYDFAYYEFVVEQGKELLKNNDL
Sequences:
>Translated_202_residues MTEWLTIFDSERNTLGKKLRDEVHRDGNWHETFHCWFVEKDAEDMFLYFQLRSKNKKEAPLIWDITSAGHIMHDEDVQIG GLREIEEELGLSFQTTDLAYKGIFTIDYEISNLTDREFCHMYFHNVINPLPFAPGEEVDDVMKIHATSFLQLLKREISSF TATSVLSNKSITITFSDIYPYDFAYYEFVVEQGKELLKNNDL >Mature_201_residues TEWLTIFDSERNTLGKKLRDEVHRDGNWHETFHCWFVEKDAEDMFLYFQLRSKNKKEAPLIWDITSAGHIMHDEDVQIGG LREIEEELGLSFQTTDLAYKGIFTIDYEISNLTDREFCHMYFHNVINPLPFAPGEEVDDVMKIHATSFLQLLKREISSFT ATSVLSNKSITITFSDIYPYDFAYYEFVVEQGKELLKNNDL
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00293 NUDIX [H]
EC number: NA
Molecular weight: Translated: 23726; Mature: 23595
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEWLTIFDSERNTLGKKLRDEVHRDGNWHETFHCWFVEKDAEDMFLYFQLRSKNKKEAP CCCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCC LIWDITSAGHIMHDEDVQIGGLREIEEELGLSFQTTDLAYKGIFTIDYEISNLTDREFCH EEEEECCCCCEEECCCCCCCCHHHHHHHHCCEEEECCEEEEEEEEEEEEECCCCHHHHHH MYFHNVINPLPFAPGEEVDDVMKIHATSFLQLLKREISSFTATSVLSNKSITITFSDIYP HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC YDFAYYEFVVEQGKELLKNNDL CHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TEWLTIFDSERNTLGKKLRDEVHRDGNWHETFHCWFVEKDAEDMFLYFQLRSKNKKEAP CCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCC LIWDITSAGHIMHDEDVQIGGLREIEEELGLSFQTTDLAYKGIFTIDYEISNLTDREFCH EEEEECCCCCEEECCCCCCCCHHHHHHHHCCEEEECCEEEEEEEEEEEEECCCCHHHHHH MYFHNVINPLPFAPGEEVDDVMKIHATSFLQLLKREISSFTATSVLSNKSITITFSDIYP HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC YDFAYYEFVVEQGKELLKNNDL CHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11466286 [H]