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The map label for this gene is cydA [H]

Identifier: 118477402

GI number: 118477402

Start: 1873548

End: 1874951

Strand: Direct

Name: cydA [H]

Synonym: BALH_1722

Alternate gene names: 118477402

Gene position: 1873548-1874951 (Clockwise)

Preceding gene: 118477401

Following gene: 118477403

Centisome position: 35.64

GC content: 36.32

Gene sequence:

>1404_bases
ATGGAAACGCTCGAATTGGCACGAATACAATTCGCATCAACAACGATTTTCCATTACTTTTTTGTTCCGCTGTCTATTGG
TTTAGCTTTTATCATTGCGTTAATGCAAACGTTATATGTAGTAAAGGGACAAGAAATTTATAAGAAGATGACGAAGTTTT
GGACACAAATATTCCTTGTTAACTTTGCGGTAGGTGTAGTAACTGGTATTCTACAAGAATTCCAGTTTGGTATGAACTGG
TCAACCTATTCACGTTTCGTAGGTGATGTGTTTGGTCCATCACTTGCGATTGAAGGTTTATTAGCATTTTTCATTGAGTC
TACATTTTTAGGTTTATGGGTATTCGGTGAGGATAAATTACCGAAGCGAATTCACCTTTTATGTATTTGGCTCCTTTCAA
TTGGAACAATGTTATCAGCATTTTGGATTTTAACTGCAAGTGCATTTATGCAATCGCCAGTAGGATATGAAATGGCAGCA
GATGGACGTGCACAAATGAATGATTTCTTAGCAATTATTCAAAACCCACAATTATGGGTACAATTCCCGCATACAATTAC
AGCGGCAATTGCAACTGGTGCATTCTTTATTGCAGGTGTGAGTGCATGGAAAATAACGAAAGCGCAAGAAACTGAAGTGT
TTAAAAAATCATTCCGCATTTCTATCATTGTTGGAACACTTACAACTGCGCTAGTATTATTCTTCGGTCATGCGCAAGCG
CAACAATTAATTAAGACACACCCAATGAAAATGGCAGCAGCTGAAGCATTATGGAATACGAGTGAGGATCCAGCGCCATT
TACAGTATTTGCGAAAATTGATGCAGAGAAGAAAGAAAATTCGTTTGAAATTCAAATCCCTTATATGCTAAGTCTATTAT
CATATGATAAATTTAGCGGTCAAGTAGAAGGTATGAATCAAATTCAAAAGCAATATGAAGAAAAATATGGGCCTGGAGAT
TATATTCCACCAGTACACACGATGTTCTGGAGTTTTAGAGCGATGGTAATGAGTGGAACATTTATGCTTATTCTAGGAGC
GTACGGATGGTTCTTATCAAGAAAAGATCGATTAGCTGAAAAAACTTGGTATTTAAAATTAATGGTGTATGCAATTTCAC
TACCGTTTATCGGTAATACAGTAGGATGGATTATGACTGAAATGGGACGTCAGCCTTGGGTAGTTTTCGGTGTTATGAAA
ACGGAAGATGCTGTATCTCCAAATGTTACGTTCGGAGAAGTGTTATTCTCTTTAGTTTCATTCACATCACTATATTTAAT
TATAGGTGGAATTACTATTTACTTATTCGTTCGTACTATTAAAGGACATGAGAATAAGAAAACGAAACAGGATTCTCAAA
GCCATGATCCATTTGATAAGGAGGAAGAGTATGTTATCTCTTAA

Upstream 100 bases:

>100_bases
AACAAATTTATCTTTCTATATTTCTAAGGATTGAGTTGTTTTATGAATACAACTCAATTGAAATTACGATATAAAAAATT
ATGAAGGAAGTGATTGTAGT

Downstream 100 bases:

>100_bases
TGAGTTGTGGTTTATCATTATTGCAGTTTTATTCGTAGGCTTCTTTGTGCTTGAAGGTTTCGATTTCGGTGTAGGTATAG
TTTCAAGGTTTTTAGGGGAA

Product: cytochrome d ubiquinol oxidase, subunit I

Products: NA

Alternate protein names: Cytochrome d ubiquinol oxidase subunit I [H]

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
METLELARIQFASTTIFHYFFVPLSIGLAFIIALMQTLYVVKGQEIYKKMTKFWTQIFLVNFAVGVVTGILQEFQFGMNW
STYSRFVGDVFGPSLAIEGLLAFFIESTFLGLWVFGEDKLPKRIHLLCIWLLSIGTMLSAFWILTASAFMQSPVGYEMAA
DGRAQMNDFLAIIQNPQLWVQFPHTITAAIATGAFFIAGVSAWKITKAQETEVFKKSFRISIIVGTLTTALVLFFGHAQA
QQLIKTHPMKMAAAEALWNTSEDPAPFTVFAKIDAEKKENSFEIQIPYMLSLLSYDKFSGQVEGMNQIQKQYEEKYGPGD
YIPPVHTMFWSFRAMVMSGTFMLILGAYGWFLSRKDRLAEKTWYLKLMVYAISLPFIGNTVGWIMTEMGRQPWVVFGVMK
TEDAVSPNVTFGEVLFSLVSFTSLYLIIGGITIYLFVRTIKGHENKKTKQDSQSHDPFDKEEEYVIS

Sequences:

>Translated_467_residues
METLELARIQFASTTIFHYFFVPLSIGLAFIIALMQTLYVVKGQEIYKKMTKFWTQIFLVNFAVGVVTGILQEFQFGMNW
STYSRFVGDVFGPSLAIEGLLAFFIESTFLGLWVFGEDKLPKRIHLLCIWLLSIGTMLSAFWILTASAFMQSPVGYEMAA
DGRAQMNDFLAIIQNPQLWVQFPHTITAAIATGAFFIAGVSAWKITKAQETEVFKKSFRISIIVGTLTTALVLFFGHAQA
QQLIKTHPMKMAAAEALWNTSEDPAPFTVFAKIDAEKKENSFEIQIPYMLSLLSYDKFSGQVEGMNQIQKQYEEKYGPGD
YIPPVHTMFWSFRAMVMSGTFMLILGAYGWFLSRKDRLAEKTWYLKLMVYAISLPFIGNTVGWIMTEMGRQPWVVFGVMK
TEDAVSPNVTFGEVLFSLVSFTSLYLIIGGITIYLFVRTIKGHENKKTKQDSQSHDPFDKEEEYVIS
>Mature_467_residues
METLELARIQFASTTIFHYFFVPLSIGLAFIIALMQTLYVVKGQEIYKKMTKFWTQIFLVNFAVGVVTGILQEFQFGMNW
STYSRFVGDVFGPSLAIEGLLAFFIESTFLGLWVFGEDKLPKRIHLLCIWLLSIGTMLSAFWILTASAFMQSPVGYEMAA
DGRAQMNDFLAIIQNPQLWVQFPHTITAAIATGAFFIAGVSAWKITKAQETEVFKKSFRISIIVGTLTTALVLFFGHAQA
QQLIKTHPMKMAAAEALWNTSEDPAPFTVFAKIDAEKKENSFEIQIPYMLSLLSYDKFSGQVEGMNQIQKQYEEKYGPGD
YIPPVHTMFWSFRAMVMSGTFMLILGAYGWFLSRKDRLAEKTWYLKLMVYAISLPFIGNTVGWIMTEMGRQPWVVFGVMK
TEDAVSPNVTFGEVLFSLVSFTSLYLIIGGITIYLFVRTIKGHENKKTKQDSQSHDPFDKEEEYVIS

Specific function: Cytochrome D Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At Low Aeration. [C]

COG id: COG1271

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome ubiquinol oxidase subunit 1 family [H]

Homologues:

Organism=Escherichia coli, GI87081779, Length=520, Percent_Identity=35.7692307692308, Blast_Score=330, Evalue=2e-91,
Organism=Escherichia coli, GI1787212, Length=512, Percent_Identity=35.7421875, Blast_Score=322, Evalue=4e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002585 [H]

Pfam domain/function: PF01654 Bac_Ubq_Cox [H]

EC number: 1.10.3.-

Molecular weight: Translated: 53009; Mature: 53009

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METLELARIQFASTTIFHYFFVPLSIGLAFIIALMQTLYVVKGQEIYKKMTKFWTQIFLV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
NFAVGVVTGILQEFQFGMNWSTYSRFVGDVFGPSLAIEGLLAFFIESTFLGLWVFGEDKL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHEEEEECCCCC
PKRIHLLCIWLLSIGTMLSAFWILTASAFMQSPVGYEMAADGRAQMNDFLAIIQNPQLWV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHCCCCEEE
QFPHTITAAIATGAFFIAGVSAWKITKAQETEVFKKSFRISIIVGTLTTALVLFFGHAQA
ECCHHHHHHHHHHHHHHHCCHHHEECCHHHHHHHHHHHEEEEEHHHHHHHHHHHHCCHHH
QQLIKTHPMKMAAAEALWNTSEDPAPFTVFAKIDAEKKENSFEIQIPYMLSLLSYDKFSG
HHHHHHCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCEEEEHHHHHHHHHHHHCCC
QVEGMNQIQKQYEEKYGPGDYIPPVHTMFWSFRAMVMSGTFMLILGAYGWFLSRKDRLAE
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
KTWYLKLMVYAISLPFIGNTVGWIMTEMGRQPWVVFGVMKTEDAVSPNVTFGEVLFSLVS
HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHH
FTSLYLIIGGITIYLFVRTIKGHENKKTKQDSQSHDPFDKEEEYVIS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
METLELARIQFASTTIFHYFFVPLSIGLAFIIALMQTLYVVKGQEIYKKMTKFWTQIFLV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
NFAVGVVTGILQEFQFGMNWSTYSRFVGDVFGPSLAIEGLLAFFIESTFLGLWVFGEDKL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHEEEEECCCCC
PKRIHLLCIWLLSIGTMLSAFWILTASAFMQSPVGYEMAADGRAQMNDFLAIIQNPQLWV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHCCCCEEE
QFPHTITAAIATGAFFIAGVSAWKITKAQETEVFKKSFRISIIVGTLTTALVLFFGHAQA
ECCHHHHHHHHHHHHHHHCCHHHEECCHHHHHHHHHHHEEEEEHHHHHHHHHHHHCCHHH
QQLIKTHPMKMAAAEALWNTSEDPAPFTVFAKIDAEKKENSFEIQIPYMLSLLSYDKFSG
HHHHHHCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCEEEEHHHHHHHHHHHHCCC
QVEGMNQIQKQYEEKYGPGDYIPPVHTMFWSFRAMVMSGTFMLILGAYGWFLSRKDRLAE
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
KTWYLKLMVYAISLPFIGNTVGWIMTEMGRQPWVVFGVMKTEDAVSPNVTFGEVLFSLVS
HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHH
FTSLYLIIGGITIYLFVRTIKGHENKKTKQDSQSHDPFDKEEEYVIS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on diphenols and related substances as donors; With oxygen as acceptor [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]