Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
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Accession | NC_008600 |
Length | 5,257,091 |
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The map label for this gene is yvbV [H]
Identifier: 118477376
GI number: 118477376
Start: 1848408
End: 1849313
Strand: Reverse
Name: yvbV [H]
Synonym: BALH_1695
Alternate gene names: 118477376
Gene position: 1849313-1848408 (Counterclockwise)
Preceding gene: 118477383
Following gene: 118477374
Centisome position: 35.18
GC content: 38.74
Gene sequence:
>906_bases GTGACACAGCTTTCTCGAACTAAGACGGCCATCATCCTTACCTTTCTCGTTTTCATGTGGGGAATCAATTGGCCTTTATC TAAATTTGCCCTGCATTACACACCACCCGTTTTATTTGCAGGCGTTCGAACTTTAATTGGAGGATTCATTTTACTCCTGT TCGCATTACCGAAATACAAAGAGTTACACTTAAAAGAAACTTGGCATTTATACGTTATTTCTTCTTTACTTAACATCATT ATATTTTACGGATTACAAACTGTCGGCCTTCAATATATGCCTGCTGGGCTATTTTCCGCCATCGTATTTCTGCAACCCGT TTTACTTGGTATTTTCTCGTGGATATGGCTTGAAGAATCAATGTATGGGTTAAAAATTTTCGGGCTTATACTCGGATTTA TTGGCGTAGGTGTTATTAGCTCTAGCAGTTTAACTGGACATATTTCTATTATCGGGATTCTTCTCGCGATAGGATGCGCT ATTGGCTGGGCACTTGGAACCGTATTTATTAAGAAGACTGGGCACCGCGTTAATTCCATTTGGATGGTAACACTGCAACT TATTATTGGCGGACTTTGCTTAATTGGATTTGGATCAGAGTTTGAAAGTTGGTCTAGTATCGCTTGGAGCATGCCGTTTG TTAGTGTACTACTCTTTATTTCATTCTTTGTTATTGCAATGGGGTGGCTTGCATACTTCACACTCGTTGGAGCTGGTGAA GCAAGTAAAGTTGGGGCTTATACATTTCTCATTCCTCTAATCGCTATTATTGTAAGTTCAATTTTCTTACATGAAGCCAT TACTATTAGCTTATTCATCGGACTATTATTTATTGTAGTGAGTATTTGTTTCGTAAATATAAAGCCGAAAACACTTGCTG TAGGGCAGCGAGTTGAAGTGAAGTAA
Upstream 100 bases:
>100_bases CATAACTAATCACTTATACTCCTCATAAAAAAGATTCATTTTATTTATTACAGTCGATATCATATCATAGTGAAATGAAT AACATCAAGGAGGTCTTACA
Downstream 100 bases:
>100_bases ATTAACATAAGAAGGAGCCTACTGATTGTAGGCTCCTTCTTATCATTATTACTTATTTTTTACGACGTACCATAAAAACA CACGTACCTACCGAAGATAC
Product: DMT family permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MTQLSRTKTAIILTFLVFMWGINWPLSKFALHYTPPVLFAGVRTLIGGFILLLFALPKYKELHLKETWHLYVISSLLNII IFYGLQTVGLQYMPAGLFSAIVFLQPVLLGIFSWIWLEESMYGLKIFGLILGFIGVGVISSSSLTGHISIIGILLAIGCA IGWALGTVFIKKTGHRVNSIWMVTLQLIIGGLCLIGFGSEFESWSSIAWSMPFVSVLLFISFFVIAMGWLAYFTLVGAGE ASKVGAYTFLIPLIAIIVSSIFLHEAITISLFIGLLFIVVSICFVNIKPKTLAVGQRVEVK
Sequences:
>Translated_301_residues MTQLSRTKTAIILTFLVFMWGINWPLSKFALHYTPPVLFAGVRTLIGGFILLLFALPKYKELHLKETWHLYVISSLLNII IFYGLQTVGLQYMPAGLFSAIVFLQPVLLGIFSWIWLEESMYGLKIFGLILGFIGVGVISSSSLTGHISIIGILLAIGCA IGWALGTVFIKKTGHRVNSIWMVTLQLIIGGLCLIGFGSEFESWSSIAWSMPFVSVLLFISFFVIAMGWLAYFTLVGAGE ASKVGAYTFLIPLIAIIVSSIFLHEAITISLFIGLLFIVVSICFVNIKPKTLAVGQRVEVK >Mature_300_residues TQLSRTKTAIILTFLVFMWGINWPLSKFALHYTPPVLFAGVRTLIGGFILLLFALPKYKELHLKETWHLYVISSLLNIII FYGLQTVGLQYMPAGLFSAIVFLQPVLLGIFSWIWLEESMYGLKIFGLILGFIGVGVISSSSLTGHISIIGILLAIGCAI GWALGTVFIKKTGHRVNSIWMVTLQLIIGGLCLIGFGSEFESWSSIAWSMPFVSVLLFISFFVIAMGWLAYFTLVGAGEA SKVGAYTFLIPLIAIIVSSIFLHEAITISLFIGLLFIVVSICFVNIKPKTLAVGQRVEVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
Organism=Escherichia coli, GI87081929, Length=293, Percent_Identity=26.962457337884, Blast_Score=84, Evalue=8e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 33180; Mature: 33048
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQLSRTKTAIILTFLVFMWGINWPLSKFALHYTPPVLFAGVRTLIGGFILLLFALPKYK CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHH ELHLKETWHLYVISSLLNIIIFYGLQTVGLQYMPAGLFSAIVFLQPVLLGIFSWIWLEES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH MYGLKIFGLILGFIGVGVISSSSLTGHISIIGILLAIGCAIGWALGTVFIKKTGHRVNSI HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH WMVTLQLIIGGLCLIGFGSEFESWSSIAWSMPFVSVLLFISFFVIAMGWLAYFTLVGAGE HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ASKVGAYTFLIPLIAIIVSSIFLHEAITISLFIGLLFIVVSICFVNIKPKTLAVGQRVEV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEECCCCCCC K C >Mature Secondary Structure TQLSRTKTAIILTFLVFMWGINWPLSKFALHYTPPVLFAGVRTLIGGFILLLFALPKYK CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHH ELHLKETWHLYVISSLLNIIIFYGLQTVGLQYMPAGLFSAIVFLQPVLLGIFSWIWLEES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH MYGLKIFGLILGFIGVGVISSSSLTGHISIIGILLAIGCAIGWALGTVFIKKTGHRVNSI HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH WMVTLQLIIGGLCLIGFGSEFESWSSIAWSMPFVSVLLFISFFVIAMGWLAYFTLVGAGE HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ASKVGAYTFLIPLIAIIVSSIFLHEAITISLFIGLLFIVVSICFVNIKPKTLAVGQRVEV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEECCCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]