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The map label for this gene is oppA [H]

Identifier: 118477293

GI number: 118477293

Start: 1752884

End: 1754545

Strand: Reverse

Name: oppA [H]

Synonym: BALH_1606

Alternate gene names: 118477293

Gene position: 1754545-1752884 (Counterclockwise)

Preceding gene: 118477298

Following gene: 118477290

Centisome position: 33.37

GC content: 34.42

Gene sequence:

>1662_bases
ATGAAGGGAAGGATGACAACTATGAGGAAAAAAACTAAAGGAATCGTTGCACTCTCAATCACATTATCTATGTTTTTAAC
AGCATGTGGTCAAAAACAAGAGGCAACAACTACCGGGGAAAAGAAAAAAGAATCTTCGAAACAAGTATTAAACATTGTAG
AAACTGGGGAAATTTCTACACTTGATTCATCTATCGCAACTGATGGATTTTCTTACGCTGCTTTAAACAACGTAATGGAA
GGATTATATATGCCTGGTCCGGATAACAAACCTGTTCCTGCAGCAGCTGAATCATACAAACTAAGCGAAGACGGAAAAAC
ATATACATTTACATTACATGATTCAAAATGGTCAAATGGCGATCCAGTGACTGCTCATGATTTTGAATATGCATGGAAAC
GTGCTATTAATCCAGAAACTGCTTCTGAATACGCACATATTATGTTCGATATTAAAAACGCAGAAAAAATAAATAAAAAA
GAATTGCCAATTGATTCATTTGGTGTAAAGGCGATTGATAATAAAACGCTTGAAGTACAGTTAGAACACCCTGTTCCATA
CTTTTTAGGTTTAATGGGATTTGCAACATTTTATCCTCAAAACCAAAAGGTTGTAGAAGCTCAAGGGAAGAATTATGGAC
TTGAAGCTGCAAATGTAGTTTATAATGGGCCGTTCCAATTAAGTGAATGGAAACATGATACAAGTTACAAAATGACAAAA
AACCCGAACTACTGGGATAATAAAAATGTGAAGCTAAATGAAATTAATGTAAATATCGTAAAAGATACTTCAACAGCCGT
TAACTTATTTGAAAGCAAACAAGTAGACCGAATTACGATTAATTCAGAGTTTGTTGATAAATATCAAAAAGATCCGAGCT
TAAAGAAAATGGAACGTCCTTCTGTGACATTTTTCCGATTTAGTCAAAAGAACCCTTTATTAGCAAACAAAAATGCTCGT
AAAGCTATTTCGCTTGCTTTTGATAAACAAGGAATCGCAACAACGATTTTAAATAATGGTTCTATACCTGCGAATGCATT
CGTTCCGAAAGGATTCGTAAAAGGACCTGACAATAAAGATTTTCGCAGTACAAGTCATGTGAAAGTAGAAACAAATGTGA
AAGAAGCTAAAAAACTATGGGAAACTGCGAAAAAAGAAACAAATTTACAAAACGCTTCTCTTTCAATCATAACAACTGAT
GAATCTAACGATAAAAAAATTAGTGAGTTTTTAAAAGGTGAACTGGAAAAAAACTTACCTGGATTAAAAATCACATTACA
GCCTCTTCCAGTAAAAGCGTTTTTAGATCGTGAAGAAAATGGTGACTACGAAATCTCACTTTCTACATGGGGGCCAGATT
ATCCTGATCCTACAACATTCTTAAATATGTTTGTCACTGACGGACCGTTTAATAAGATGAGTTATTCAAACAAACAATAC
GACGAATTAATTGAGAAAACGAGCTCTACTTTAGCAACTGATTTACCAGCACGTTGGAAAGCGTTCCAAGATGCAGAAAA
AATATTACTCGAAGATGATGCAGCTATCGCTCCAATCTTCCAATCAGGACTTGTATATTTAGAACGTCCAACAGTAAAAG
GTGTTGTTATTCGTCCATTTGCAGGAATTTATTCTTATAAGTGGGCTTCTATTACAGAATAA

Upstream 100 bases:

>100_bases
TTTCCAGAAATATCACTTTTTAAATAATATATTTTTTCTATACGTTTTATCGGATTTAGTTATAGAAATTTTCTATATTT
TCTTTTATACTAAGGCAGAG

Downstream 100 bases:

>100_bases
GAAAAAGGCGATCCTAACATATATTAGGATCGCCTTTTTTATTAAATTGCAAAACGTTTATACTTTTCGTAATCACTCGT
TTTACATTCTACTTCTAGTT

Product: oligopeptide transporter, periplasmic-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:

>553_residues
MKGRMTTMRKKTKGIVALSITLSMFLTACGQKQEATTTGEKKKESSKQVLNIVETGEISTLDSSIATDGFSYAALNNVME
GLYMPGPDNKPVPAAAESYKLSEDGKTYTFTLHDSKWSNGDPVTAHDFEYAWKRAINPETASEYAHIMFDIKNAEKINKK
ELPIDSFGVKAIDNKTLEVQLEHPVPYFLGLMGFATFYPQNQKVVEAQGKNYGLEAANVVYNGPFQLSEWKHDTSYKMTK
NPNYWDNKNVKLNEINVNIVKDTSTAVNLFESKQVDRITINSEFVDKYQKDPSLKKMERPSVTFFRFSQKNPLLANKNAR
KAISLAFDKQGIATTILNNGSIPANAFVPKGFVKGPDNKDFRSTSHVKVETNVKEAKKLWETAKKETNLQNASLSIITTD
ESNDKKISEFLKGELEKNLPGLKITLQPLPVKAFLDREENGDYEISLSTWGPDYPDPTTFLNMFVTDGPFNKMSYSNKQY
DELIEKTSSTLATDLPARWKAFQDAEKILLEDDAAIAPIFQSGLVYLERPTVKGVVIRPFAGIYSYKWASITE

Sequences:

>Translated_553_residues
MKGRMTTMRKKTKGIVALSITLSMFLTACGQKQEATTTGEKKKESSKQVLNIVETGEISTLDSSIATDGFSYAALNNVME
GLYMPGPDNKPVPAAAESYKLSEDGKTYTFTLHDSKWSNGDPVTAHDFEYAWKRAINPETASEYAHIMFDIKNAEKINKK
ELPIDSFGVKAIDNKTLEVQLEHPVPYFLGLMGFATFYPQNQKVVEAQGKNYGLEAANVVYNGPFQLSEWKHDTSYKMTK
NPNYWDNKNVKLNEINVNIVKDTSTAVNLFESKQVDRITINSEFVDKYQKDPSLKKMERPSVTFFRFSQKNPLLANKNAR
KAISLAFDKQGIATTILNNGSIPANAFVPKGFVKGPDNKDFRSTSHVKVETNVKEAKKLWETAKKETNLQNASLSIITTD
ESNDKKISEFLKGELEKNLPGLKITLQPLPVKAFLDREENGDYEISLSTWGPDYPDPTTFLNMFVTDGPFNKMSYSNKQY
DELIEKTSSTLATDLPARWKAFQDAEKILLEDDAAIAPIFQSGLVYLERPTVKGVVIRPFAGIYSYKWASITE
>Mature_553_residues
MKGRMTTMRKKTKGIVALSITLSMFLTACGQKQEATTTGEKKKESSKQVLNIVETGEISTLDSSIATDGFSYAALNNVME
GLYMPGPDNKPVPAAAESYKLSEDGKTYTFTLHDSKWSNGDPVTAHDFEYAWKRAINPETASEYAHIMFDIKNAEKINKK
ELPIDSFGVKAIDNKTLEVQLEHPVPYFLGLMGFATFYPQNQKVVEAQGKNYGLEAANVVYNGPFQLSEWKHDTSYKMTK
NPNYWDNKNVKLNEINVNIVKDTSTAVNLFESKQVDRITINSEFVDKYQKDPSLKKMERPSVTFFRFSQKNPLLANKNAR
KAISLAFDKQGIATTILNNGSIPANAFVPKGFVKGPDNKDFRSTSHVKVETNVKEAKKLWETAKKETNLQNASLSIITTD
ESNDKKISEFLKGELEKNLPGLKITLQPLPVKAFLDREENGDYEISLSTWGPDYPDPTTFLNMFVTDGPFNKMSYSNKQY
DELIEKTSSTLATDLPARWKAFQDAEKILLEDDAAIAPIFQSGLVYLERPTVKGVVIRPFAGIYSYKWASITE

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the binding of dipeptides with high affinity. Is expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1789397, Length=499, Percent_Identity=28.4569138276553, Blast_Score=202, Evalue=3e-53,
Organism=Escherichia coli, GI1787495, Length=474, Percent_Identity=29.1139240506329, Blast_Score=193, Evalue=2e-50,
Organism=Escherichia coli, GI87081878, Length=531, Percent_Identity=28.060263653484, Blast_Score=182, Evalue=4e-47,
Organism=Escherichia coli, GI1787762, Length=456, Percent_Identity=26.3157894736842, Blast_Score=116, Evalue=5e-27,
Organism=Escherichia coli, GI1789966, Length=469, Percent_Identity=22.6012793176972, Blast_Score=82, Evalue=9e-17,
Organism=Escherichia coli, GI1787551, Length=530, Percent_Identity=21.5094339622642, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787052, Length=552, Percent_Identity=23.1884057971014, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1789887, Length=509, Percent_Identity=24.1650294695481, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 62104; Mature: 62104

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGRMTTMRKKTKGIVALSITLSMFLTACGQKQEATTTGEKKKESSKQVLNIVETGEIST
CCCCHHHHHHHHCCEEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEE
LDSSIATDGFSYAALNNVMEGLYMPGPDNKPVPAAAESYKLSEDGKTYTFTLHDSKWSNG
CCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHCEEECCCCCEEEEEEECCCCCCC
DPVTAHDFEYAWKRAINPETASEYAHIMFDIKNAEKINKKELPIDSFGVKAIDNKTLEVQ
CCCEECCHHHHHHHCCCCCHHHCEEEEEEEECCCHHCCHHCCCCCCCCCEEECCCEEEEE
LEHPVPYFLGLMGFATFYPQNQKVVEAQGKNYGLEAANVVYNGPFQLSEWKHDTSYKMTK
ECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCEECCCCCCCCCEEECC
NPNYWDNKNVKLNEINVNIVKDTSTAVNLFESKQVDRITINSEFVDKYQKDPSLKKMERP
CCCCCCCCCEEEEEEEEEEEECCCHHHHHHHCCCCCEEEECHHHHHHHHCCCCHHHHCCC
SVTFFRFSQKNPLLANKNARKAISLAFDKQGIATTILNNGSIPANAFVPKGFVKGPDNKD
CEEEEEECCCCCCEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
FRSTSHVKVETNVKEAKKLWETAKKETNLQNASLSIITTDESNDKKISEFLKGELEKNLP
CCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC
GLKITLQPLPVKAFLDREENGDYEISLSTWGPDYPDPTTFLNMFVTDGPFNKMSYSNKQY
CEEEEEECCCEEEEECCCCCCCEEEEEECCCCCCCCHHHEEEEEEECCCCCCCCCCCHHH
DELIEKTSSTLATDLPARWKAFQDAEKILLEDDAAIAPIFQSGLVYLERPTVKGVVIRPF
HHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCCHHHHHCCEEEEECCCCCCEEEECC
AGIYSYKWASITE
CCHHEECCCCCCC
>Mature Secondary Structure
MKGRMTTMRKKTKGIVALSITLSMFLTACGQKQEATTTGEKKKESSKQVLNIVETGEIST
CCCCHHHHHHHHCCEEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEE
LDSSIATDGFSYAALNNVMEGLYMPGPDNKPVPAAAESYKLSEDGKTYTFTLHDSKWSNG
CCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHCEEECCCCCEEEEEEECCCCCCC
DPVTAHDFEYAWKRAINPETASEYAHIMFDIKNAEKINKKELPIDSFGVKAIDNKTLEVQ
CCCEECCHHHHHHHCCCCCHHHCEEEEEEEECCCHHCCHHCCCCCCCCCEEECCCEEEEE
LEHPVPYFLGLMGFATFYPQNQKVVEAQGKNYGLEAANVVYNGPFQLSEWKHDTSYKMTK
ECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCEECCCCCCCCCEEECC
NPNYWDNKNVKLNEINVNIVKDTSTAVNLFESKQVDRITINSEFVDKYQKDPSLKKMERP
CCCCCCCCCEEEEEEEEEEEECCCHHHHHHHCCCCCEEEECHHHHHHHHCCCCHHHHCCC
SVTFFRFSQKNPLLANKNARKAISLAFDKQGIATTILNNGSIPANAFVPKGFVKGPDNKD
CEEEEEECCCCCCEECCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
FRSTSHVKVETNVKEAKKLWETAKKETNLQNASLSIITTDESNDKKISEFLKGELEKNLP
CCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCC
GLKITLQPLPVKAFLDREENGDYEISLSTWGPDYPDPTTFLNMFVTDGPFNKMSYSNKQY
CEEEEEECCCEEEEECCCCCCCEEEEEECCCCCCCCHHHEEEEEEECCCCCCCCCCCHHH
DELIEKTSSTLATDLPARWKAFQDAEKILLEDDAAIAPIFQSGLVYLERPTVKGVVIRPF
HHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCCHHHHHCCEEEEECCCCCCEEEECC
AGIYSYKWASITE
CCHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377 [H]