Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
---|---|
Accession | NC_008600 |
Length | 5,257,091 |
Click here to switch to the map view.
The map label for this gene is yfmQ [H]
Identifier: 118477223
GI number: 118477223
Start: 1675059
End: 1675481
Strand: Reverse
Name: yfmQ [H]
Synonym: BALH_1529
Alternate gene names: 118477223
Gene position: 1675481-1675059 (Counterclockwise)
Preceding gene: 118477230
Following gene: 118477217
Centisome position: 31.87
GC content: 32.86
Gene sequence:
>423_bases ATGACGACTTGGTTTATTGTAATGTTAGTTGTATTTGGAGCATTTAAAATTATCGTTTCTAGCCTTCCCAACTCTGTTAT TGAATCCATTATTAGTAAGTACGAAACACATCCACAGCTTGAAGAAGCGAATGCGACTGTTACAATCAATGGAAATAACG TAGAAGGCGAAAAGAAATCCAAAATTATTCATGATTTTAACGAAGGTTTATTTTTAGATCGCTATTATGCACCACCACAC AATGAGGGCACGCCTTTAATTATCAATGCAAAACGTGGCAAAAAAGATTTTATCTTTTATATTTATAGTCATGAAGAGCA TGTTGATGTTGTAAAGCAACATAAAAAGAAGGTAGTTGCTTATAGTTTACGCTCTAAAAACCTTCAAAATAATGATATGT TCGTGTCAGCTGATTTAGCTTAA
Upstream 100 bases:
>100_bases ATACAAATGGCATATTTTTCACAAATTATACAAAACTTCACCTTATGTACTATTACCATATGAGTTATATTATTTAATAG GAAAAAGGGGATGATATAGT
Downstream 100 bases:
>100_bases TACTCATATATTAGAAAAAGGAATCCATATATGTAAGGATTCCTTTTTACTATTCACTGAAAACTAAGCTCTGTTTTCAA ACTATCTTTCGGTAACAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MTTWFIVMLVVFGAFKIIVSSLPNSVIESIISKYETHPQLEEANATVTINGNNVEGEKKSKIIHDFNEGLFLDRYYAPPH NEGTPLIINAKRGKKDFIFYIYSHEEHVDVVKQHKKKVVAYSLRSKNLQNNDMFVSADLA
Sequences:
>Translated_140_residues MTTWFIVMLVVFGAFKIIVSSLPNSVIESIISKYETHPQLEEANATVTINGNNVEGEKKSKIIHDFNEGLFLDRYYAPPH NEGTPLIINAKRGKKDFIFYIYSHEEHVDVVKQHKKKVVAYSLRSKNLQNNDMFVSADLA >Mature_139_residues TTWFIVMLVVFGAFKIIVSSLPNSVIESIISKYETHPQLEEANATVTINGNNVEGEKKSKIIHDFNEGLFLDRYYAPPHN EGTPLIINAKRGKKDFIFYIYSHEEHVDVVKQHKKKVVAYSLRSKNLQNNDMFVSADLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019723 [H]
Pfam domain/function: PF10787 YfmQ [H]
EC number: NA
Molecular weight: Translated: 15986; Mature: 15854
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTWFIVMLVVFGAFKIIVSSLPNSVIESIISKYETHPQLEEANATVTINGNNVEGEKKS CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHH KIIHDFNEGLFLDRYYAPPHNEGTPLIINAKRGKKDFIFYIYSHEEHVDVVKQHKKKVVA HHHHHCCCCEEEEEEECCCCCCCCCEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHH YSLRSKNLQNNDMFVSADLA HHHHCCCCCCCCEEEEEECC >Mature Secondary Structure TTWFIVMLVVFGAFKIIVSSLPNSVIESIISKYETHPQLEEANATVTINGNNVEGEKKS HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHH KIIHDFNEGLFLDRYYAPPHNEGTPLIINAKRGKKDFIFYIYSHEEHVDVVKQHKKKVVA HHHHHCCCCEEEEEEECCCCCCCCCEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHH YSLRSKNLQNNDMFVSADLA HHHHCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9141694; 9384377 [H]