Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
---|---|
Accession | NC_008600 |
Length | 5,257,091 |
Click here to switch to the map view.
The map label for this gene is wcaA [C]
Identifier: 118476783
GI number: 118476783
Start: 1218997
End: 1219986
Strand: Reverse
Name: wcaA [C]
Synonym: BALH_1066
Alternate gene names: 118476783
Gene position: 1219986-1218997 (Counterclockwise)
Preceding gene: 118476784
Following gene: 118476782
Centisome position: 23.21
GC content: 35.86
Gene sequence:
>990_bases ATGAATATACAAGTTATCAAGATATTGTTATTACAAAAAAAAGAGTCTGAAAGGAAGTTACGTATGACGAGCGAAAAGGA TCTACCGCTTGTTTCCATTCTTATTCCCACTTATAATCGGCCTCATTATTTCAAAATCGCTCTAGAAAGTGCTTTAGCAC AAACTTACTCAAATATTGAAATCATCATCGGTGATGATAGTACAAATGATGAGACAGAAACTTTAATACATGAACAGTAT TTACCACATTATAAAAACGTCACCTACATTCGAAACACCCCTCCCCTAGGACAATTTCACAATGACCTTATGCTCCTAGA GAAATCGAATGGTGAGTATATAAATTTTCTAATGGACGATGATGTATTTTATAAACATAAAATACAAAAAATGATGGACT ATTTTGAGCAAGATACCAATAAAGCTCTGGCTCTTGTTACTTCTTACCGAGTACGTATTGATGATCACGGCGACTTAATA GGCGATGCCCATCCAACACAAAGGTTATATAGCGAAGATACCCCATTAAACGGAATGTTTTTAGGCGACTGGATGCTAAA GGAGGGCCACAACATTATCGGTGAACCTACAACTACTTTGTTCCGAAAAGAATTGCTTACTGAACCTTTTGGCACACTTA AAGAGCGACAGTATTCTTGTAGTGTTGATATGGCCTCATGGATTTCTTTACTTTCTAAAGGAGATGCAGTATACATTTCC GAGCCCTTAAGTCAATTTCGATATCACGCTGGACAACAAATACACAATAAGCTCCTTCAAGGGTGTGAAGATTTCACACA CCTCGTCATAACGGCAAAAGAATATGGATTTTTACAAAATACTACAGACTATAGAACAGCCCTACTTAGTGCTTACAAAT GGTGTAAAAGTTCCTTAAAATACTACCTTCATCAACTAGATATTTTTCCTGACGCACATGTACGTCTTTCCCATTGTTTG GTTATAATTATTAAAGAGTTAAACAATTAA
Upstream 100 bases:
>100_bases TTTGCAGTTGCTTATCCCGAAACAAATATTTATTCTCTATTAAATAAATACGGCTTAGAAGCAATAAATAAACCATATTA CGGTTTATGGTGCGGTAGAC
Downstream 100 bases:
>100_bases ACTACTCTGCAAAATCAAAAATGTATGGACTATTTGTGAATTATTCGTATAGTTCATACATTTTTTCTCATACTATAAAA TCCATTACTATAAAGAGCAG
Product: glycosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MNIQVIKILLLQKKESERKLRMTSEKDLPLVSILIPTYNRPHYFKIALESALAQTYSNIEIIIGDDSTNDETETLIHEQY LPHYKNVTYIRNTPPLGQFHNDLMLLEKSNGEYINFLMDDDVFYKHKIQKMMDYFEQDTNKALALVTSYRVRIDDHGDLI GDAHPTQRLYSEDTPLNGMFLGDWMLKEGHNIIGEPTTTLFRKELLTEPFGTLKERQYSCSVDMASWISLLSKGDAVYIS EPLSQFRYHAGQQIHNKLLQGCEDFTHLVITAKEYGFLQNTTDYRTALLSAYKWCKSSLKYYLHQLDIFPDAHVRLSHCL VIIIKELNN
Sequences:
>Translated_329_residues MNIQVIKILLLQKKESERKLRMTSEKDLPLVSILIPTYNRPHYFKIALESALAQTYSNIEIIIGDDSTNDETETLIHEQY LPHYKNVTYIRNTPPLGQFHNDLMLLEKSNGEYINFLMDDDVFYKHKIQKMMDYFEQDTNKALALVTSYRVRIDDHGDLI GDAHPTQRLYSEDTPLNGMFLGDWMLKEGHNIIGEPTTTLFRKELLTEPFGTLKERQYSCSVDMASWISLLSKGDAVYIS EPLSQFRYHAGQQIHNKLLQGCEDFTHLVITAKEYGFLQNTTDYRTALLSAYKWCKSSLKYYLHQLDIFPDAHVRLSHCL VIIIKELNN >Mature_329_residues MNIQVIKILLLQKKESERKLRMTSEKDLPLVSILIPTYNRPHYFKIALESALAQTYSNIEIIIGDDSTNDETETLIHEQY LPHYKNVTYIRNTPPLGQFHNDLMLLEKSNGEYINFLMDDDVFYKHKIQKMMDYFEQDTNKALALVTSYRVRIDDHGDLI GDAHPTQRLYSEDTPLNGMFLGDWMLKEGHNIIGEPTTTLFRKELLTEPFGTLKERQYSCSVDMASWISLLSKGDAVYIS EPLSQFRYHAGQQIHNKLLQGCEDFTHLVITAKEYGFLQNTTDYRTALLSAYKWCKSSLKYYLHQLDIFPDAHVRLSHCL VIIIKELNN
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 38281; Mature: 38281
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIQVIKILLLQKKESERKLRMTSEKDLPLVSILIPTYNRPHYFKIALESALAQTYSNIE CCCEEEEEEEHHCCCCHHHHCCCCCCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHCCEE IIIGDDSTNDETETLIHEQYLPHYKNVTYIRNTPPLGQFHNDLMLLEKSNGEYINFLMDD EEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCEEEEEECC DVFYKHKIQKMMDYFEQDTNKALALVTSYRVRIDDHGDLIGDAHPTQRLYSEDTPLNGMF CHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCEE LGDWMLKEGHNIIGEPTTTLFRKELLTEPFGTLKERQYSCSVDMASWISLLSKGDAVYIS EECHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEH EPLSQFRYHAGQQIHNKLLQGCEDFTHLVITAKEYGFLQNTTDYRTALLSAYKWCKSSLK HHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHH YYLHQLDIFPDAHVRLSHCLVIIIKELNN HHHHHHHCCCCCHHHHHHHHHHHEEHHCC >Mature Secondary Structure MNIQVIKILLLQKKESERKLRMTSEKDLPLVSILIPTYNRPHYFKIALESALAQTYSNIE CCCEEEEEEEHHCCCCHHHHCCCCCCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHCCEE IIIGDDSTNDETETLIHEQYLPHYKNVTYIRNTPPLGQFHNDLMLLEKSNGEYINFLMDD EEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCEEEEEECC DVFYKHKIQKMMDYFEQDTNKALALVTSYRVRIDDHGDLIGDAHPTQRLYSEDTPLNGMF CHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCEE LGDWMLKEGHNIIGEPTTTLFRKELLTEPFGTLKERQYSCSVDMASWISLLSKGDAVYIS EECHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEH EPLSQFRYHAGQQIHNKLLQGCEDFTHLVITAKEYGFLQNTTDYRTALLSAYKWCKSSLK HHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHH YYLHQLDIFPDAHVRLSHCLVIIIKELNN HHHHHHHCCCCCHHHHHHHHHHHEEHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA