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The map label for this gene is yhdL [H]

Identifier: 118476706

GI number: 118476706

Start: 1131159

End: 1132286

Strand: Reverse

Name: yhdL [H]

Synonym: BALH_0985

Alternate gene names: 118476706

Gene position: 1132286-1131159 (Counterclockwise)

Preceding gene: 118476708

Following gene: 118476704

Centisome position: 21.54

GC content: 35.99

Gene sequence:

>1128_bases
GTGATACGGATGGGTTGTACAGAATTTAAAAAACTATGGGAGAAATACGAAAACGGAACACTCACGCATAATGAACAAGA
ACTGTTAGAAAATCATATTGAGACATGTGAAGAATGTGAAGCTTACTTAGATGAGTTGCTTTCGAAGAGTGAACCAATAA
AGAAAAAACTACCACCACAAAAGCTGAAAGTCCCGTTTTGGAAAATAAAATGGAAACAACGTTGGCAAACCGTTAGTTTT
GTCCTTGCCGTTTGTATTGCAATCTATTTTGTCGATCATTTTTCATCTTCTCTTTACTTCTATAATATGAAAAAGTTAGC
CGAAGTAAATGAGATTCCAGCACTCGCACTAGAAGCAACAATTCCAAATAGTCGTTCCACTGGAGGCAGTACAAAAATCA
AACCCTTTTTCCGTACAGAAAATGAAATGAATTTATATAAAACGGTCGGCAAAAAAGAAATTCAATTCGGTACAGTTACA
ACAAAAAGCTTCTTATCTTCTGTAACCGTTACAAATAAATCTTGGGCAAACAAATTGAATCGCTCAAATCTTTATTTTGT
TCATCCAAAAATAAAACAAGGTGATCACTTAAAAGAATCATCTAAAAAAGTTTGGGATACACTTGCAAAAGTACATGATG
GAACCGTTGTAGAAGTAGCAATATCTTTTGACAAACCTTACACTTTACAAGAGTTAGAATCCATTCTATATAGCGCATTT
GAAGCACAAGAAATGCCGCCAACTCCTTTATGGTACGCTTTAGACACAGGGCAAGAAAGAATAGATGAAGAAGATTTCAC
TCTACATGGCGGAGAGGTTATCGGATTTTCAGAACATATAAACCTCCCTGATAGTGAAGCAGAACGACCGAAGACAAAAG
AAGATGAAGTAATCGAAATGATGCGCATTCTTTCTACACATAAAGAAACTGTAAGTAAAACTACTCGGACTCCTGAAAAA
GAACTAAACTTAGATAAACGCTATGAGTATGTAAAAGAGAACGGCGTAAAAGTATACGGGATCGTCATTACCGGACCGTC
CAAAGAGTTATTAAAATTACAAAACTCACCTCACGTTCGTTATGCGACTCTTGGAGATATTGAGGTTTGGAATTGGTTTG
ATCAGTGA

Upstream 100 bases:

>100_bases
GATTCTCTTATAAGGAAATAGCAGTGATGACTGGTCTCTCACTAGCAAAAGTGAAAATTGAATTACACCGTGGTCGAAAA
GAAATGAAAAGCATAAAGGA

Downstream 100 bases:

>100_bases
TGAGAAAAGTAGAGCATCTAGGAGTGATGCTCTACTTTTTAATCTGAAATCACTTTCACATACATCCCTCTCACCGCTTT
TTCATAAGCAATCTCACTCA

Product: sigma-M negative effector

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MIRMGCTEFKKLWEKYENGTLTHNEQELLENHIETCEECEAYLDELLSKSEPIKKKLPPQKLKVPFWKIKWKQRWQTVSF
VLAVCIAIYFVDHFSSSLYFYNMKKLAEVNEIPALALEATIPNSRSTGGSTKIKPFFRTENEMNLYKTVGKKEIQFGTVT
TKSFLSSVTVTNKSWANKLNRSNLYFVHPKIKQGDHLKESSKKVWDTLAKVHDGTVVEVAISFDKPYTLQELESILYSAF
EAQEMPPTPLWYALDTGQERIDEEDFTLHGGEVIGFSEHINLPDSEAERPKTKEDEVIEMMRILSTHKETVSKTTRTPEK
ELNLDKRYEYVKENGVKVYGIVITGPSKELLKLQNSPHVRYATLGDIEVWNWFDQ

Sequences:

>Translated_375_residues
MIRMGCTEFKKLWEKYENGTLTHNEQELLENHIETCEECEAYLDELLSKSEPIKKKLPPQKLKVPFWKIKWKQRWQTVSF
VLAVCIAIYFVDHFSSSLYFYNMKKLAEVNEIPALALEATIPNSRSTGGSTKIKPFFRTENEMNLYKTVGKKEIQFGTVT
TKSFLSSVTVTNKSWANKLNRSNLYFVHPKIKQGDHLKESSKKVWDTLAKVHDGTVVEVAISFDKPYTLQELESILYSAF
EAQEMPPTPLWYALDTGQERIDEEDFTLHGGEVIGFSEHINLPDSEAERPKTKEDEVIEMMRILSTHKETVSKTTRTPEK
ELNLDKRYEYVKENGVKVYGIVITGPSKELLKLQNSPHVRYATLGDIEVWNWFDQ
>Mature_375_residues
MIRMGCTEFKKLWEKYENGTLTHNEQELLENHIETCEECEAYLDELLSKSEPIKKKLPPQKLKVPFWKIKWKQRWQTVSF
VLAVCIAIYFVDHFSSSLYFYNMKKLAEVNEIPALALEATIPNSRSTGGSTKIKPFFRTENEMNLYKTVGKKEIQFGTVT
TKSFLSSVTVTNKSWANKLNRSNLYFVHPKIKQGDHLKESSKKVWDTLAKVHDGTVVEVAISFDKPYTLQELESILYSAF
EAQEMPPTPLWYALDTGQERIDEEDFTLHGGEVIGFSEHINLPDSEAERPKTKEDEVIEMMRILSTHKETVSKTTRTPEK
ELNLDKRYEYVKENGVKVYGIVITGPSKELLKLQNSPHVRYATLGDIEVWNWFDQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43448; Mature: 43448

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRMGCTEFKKLWEKYENGTLTHNEQELLENHIETCEECEAYLDELLSKSEPIKKKLPPQ
CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCH
KLKVPFWKIKWKQRWQTVSFVLAVCIAIYFVDHFSSSLYFYNMKKLAEVNEIPALALEAT
HHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCEEEEEE
IPNSRSTGGSTKIKPFFRTENEMNLYKTVGKKEIQFGTVTTKSFLSSVTVTNKSWANKLN
CCCCCCCCCCCCCCEEECCCCCCHHHHHCCCCCEEEECCHHHHHHHHHHCCCHHHHHHCC
RSNLYFVHPKIKQGDHLKESSKKVWDTLAKVHDGTVVEVAISFDKPYTLQELESILYSAF
CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHH
EAQEMPPTPLWYALDTGQERIDEEDFTLHGGEVIGFSEHINLPDSEAERPKTKEDEVIEM
HHCCCCCCCEEEEECCCHHHCCCCCCEEECCEEEEECCCCCCCCCCCCCCCCCHHHHHHH
MRILSTHKETVSKTTRTPEKELNLDKRYEYVKENGVKVYGIVITGPSKELLKLQNSPHVR
HHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHCCCCCEE
YATLGDIEVWNWFDQ
EEEECCEEECCCCCC
>Mature Secondary Structure
MIRMGCTEFKKLWEKYENGTLTHNEQELLENHIETCEECEAYLDELLSKSEPIKKKLPPQ
CCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCH
KLKVPFWKIKWKQRWQTVSFVLAVCIAIYFVDHFSSSLYFYNMKKLAEVNEIPALALEAT
HHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCEEEEEE
IPNSRSTGGSTKIKPFFRTENEMNLYKTVGKKEIQFGTVTTKSFLSSVTVTNKSWANKLN
CCCCCCCCCCCCCCEEECCCCCCHHHHHCCCCCEEEECCHHHHHHHHHHCCCHHHHHHCC
RSNLYFVHPKIKQGDHLKESSKKVWDTLAKVHDGTVVEVAISFDKPYTLQELESILYSAF
CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHH
EAQEMPPTPLWYALDTGQERIDEEDFTLHGGEVIGFSEHINLPDSEAERPKTKEDEVIEM
HHCCCCCCCEEEEECCCHHHCCCCCCEEECCEEEEECCCCCCCCCCCCCCCCCHHHHHHH
MRILSTHKETVSKTTRTPEKELNLDKRYEYVKENGVKVYGIVITGPSKELLKLQNSPHVR
HHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHCCCCCEE
YATLGDIEVWNWFDQ
EEEECCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377; 10216858 [H]