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The map label for this gene is yobV [H]

Identifier: 118476687

GI number: 118476687

Start: 1112642

End: 1113583

Strand: Reverse

Name: yobV [H]

Synonym: BALH_0965

Alternate gene names: 118476687

Gene position: 1113583-1112642 (Counterclockwise)

Preceding gene: 118476701

Following gene: 118476686

Centisome position: 21.18

GC content: 36.94

Gene sequence:

>942_bases
ATGAATCGGACGGATCGTTTACTAGCTATATTAATTGAATTACAAAGAAGACAAACTGTTACAGCACAAAGCTTAGCGGA
AAAATTTGAGACAAGTATAAGAACGATTTATCGAGACATGGATGCACTTAGTGAATCTGGCGTCCCACTTTTCGCCATGC
CCGGCCACGGCTACTCATTAATGGATGGTTATTTCTTACCACCCATTCAACTTACGCCTGAAGAGGCTGTTACTCTTTTA
TTAGGCGGTGATTATATCGAGAAAACTTTCACTTCTTCTTTTTCTGTACATGCACGATCAGCAAAAGAGAAACTTGAGGT
TATCCTCCCTGCTGACCAACAAAAGAAAGCCCAGGAATTACGAGGAACTTTTCGTTTCCTTTCTCCTATATTTTCACATC
AGCAATCTGAACAAGAAAAGCTGGAAAATCAAATTCTCCTATTGCAAGAAGCTATTCAAAAAGAACAGGCTATCTCTTTT
TCTTATCTGAAACCGAGAGAAACTACAAAAATAAAACGGACCGTTCATCCTTACGGCTTAGTCAATATTTCAGGAATTTG
GTACATCGTTGCCCATTGTTTACTTCGAAAAAAAATACGTAATTTCCGTTTAGATCGAATGGATGGACTACAACAAGAAC
AAGAATTCTTTATAAAACCCGAAGACTTTTCTTTGCAAGAATATCAGCCTGAAAGCAACCGTACTGTGATGATTCATTTA
TTATTCCCATCCCATATTGCACATAAAATTATTGAATCACGATACTTCTTTATAGATTCATACGAACATAGAAATGATGG
TTTTCACGTCTTTTTGAAATCAAGAAACATAGATGAAGTGTTTCAATGGGTATTGAGCTGGGGAAGCCAAGTGCAAGTAC
TTGAGCCAAACGTTCTATCTGAAAAAATCCGTGATGAAGCAAAGAAAATGTTACAACTTTAA

Upstream 100 bases:

>100_bases
ATATTATACATAGGGAAAAGTATGTTAATGGGAGGGAAATTTATATTAGTTTTAGAAGTTTACAGGAGGCATATTTATTA
AGGATAAAAGGAGATATTTC

Downstream 100 bases:

>100_bases
TTTTTGCATTTCACTACTGACATAATGTTGTCAGCATTACTTCTTTATAGTAGGTAGTAACAAATACATTTTCATAAAAA
GGAGTTAGTGATATGAAGAA

Product: DeoR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MNRTDRLLAILIELQRRQTVTAQSLAEKFETSIRTIYRDMDALSESGVPLFAMPGHGYSLMDGYFLPPIQLTPEEAVTLL
LGGDYIEKTFTSSFSVHARSAKEKLEVILPADQQKKAQELRGTFRFLSPIFSHQQSEQEKLENQILLLQEAIQKEQAISF
SYLKPRETTKIKRTVHPYGLVNISGIWYIVAHCLLRKKIRNFRLDRMDGLQQEQEFFIKPEDFSLQEYQPESNRTVMIHL
LFPSHIAHKIIESRYFFIDSYEHRNDGFHVFLKSRNIDEVFQWVLSWGSQVQVLEPNVLSEKIRDEAKKMLQL

Sequences:

>Translated_313_residues
MNRTDRLLAILIELQRRQTVTAQSLAEKFETSIRTIYRDMDALSESGVPLFAMPGHGYSLMDGYFLPPIQLTPEEAVTLL
LGGDYIEKTFTSSFSVHARSAKEKLEVILPADQQKKAQELRGTFRFLSPIFSHQQSEQEKLENQILLLQEAIQKEQAISF
SYLKPRETTKIKRTVHPYGLVNISGIWYIVAHCLLRKKIRNFRLDRMDGLQQEQEFFIKPEDFSLQEYQPESNRTVMIHL
LFPSHIAHKIIESRYFFIDSYEHRNDGFHVFLKSRNIDEVFQWVLSWGSQVQVLEPNVLSEKIRDEAKKMLQL
>Mature_313_residues
MNRTDRLLAILIELQRRQTVTAQSLAEKFETSIRTIYRDMDALSESGVPLFAMPGHGYSLMDGYFLPPIQLTPEEAVTLL
LGGDYIEKTFTSSFSVHARSAKEKLEVILPADQQKKAQELRGTFRFLSPIFSHQQSEQEKLENQILLLQEAIQKEQAISF
SYLKPRETTKIKRTVHPYGLVNISGIWYIVAHCLLRKKIRNFRLDRMDGLQQEQEFFIKPEDFSLQEYQPESNRTVMIHL
LFPSHIAHKIIESRYFFIDSYEHRNDGFHVFLKSRNIDEVFQWVLSWGSQVQVLEPNVLSEKIRDEAKKMLQL

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 36595; Mature: 36595

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRTDRLLAILIELQRRQTVTAQSLAEKFETSIRTIYRDMDALSESGVPLFAMPGHGYSL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHH
MDGYFLPPIQLTPEEAVTLLLGGDYIEKTFTSSFSVHARSAKEKLEVILPADQQKKAQEL
CCCEECCCCEECHHHHEEEEECCHHHHHHHHCCHHHHHHHHHHHEEEEECCCHHHHHHHH
RGTFRFLSPIFSHQQSEQEKLENQILLLQEAIQKEQAISFSYLKPRETTKIKRTVHPYGL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHCCCCCE
VNISGIWYIVAHCLLRKKIRNFRLDRMDGLQQEQEFFIKPEDFSLQEYQPESNRTVMIHL
EEHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHEECCCCCCHHCCCCCCCCEEEEEE
LFPSHIAHKIIESRYFFIDSYEHRNDGFHVFLKSRNIDEVFQWVLSWGSQVQVLEPNVLS
ECHHHHHHHHHHHHEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEEECCHHHH
EKIRDEAKKMLQL
HHHHHHHHHHHCC
>Mature Secondary Structure
MNRTDRLLAILIELQRRQTVTAQSLAEKFETSIRTIYRDMDALSESGVPLFAMPGHGYSL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHH
MDGYFLPPIQLTPEEAVTLLLGGDYIEKTFTSSFSVHARSAKEKLEVILPADQQKKAQEL
CCCEECCCCEECHHHHEEEEECCHHHHHHHHCCHHHHHHHHHHHEEEEECCCHHHHHHHH
RGTFRFLSPIFSHQQSEQEKLENQILLLQEAIQKEQAISFSYLKPRETTKIKRTVHPYGL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHCCCCCE
VNISGIWYIVAHCLLRKKIRNFRLDRMDGLQQEQEFFIKPEDFSLQEYQPESNRTVMIHL
EEHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHEECCCCCCHHCCCCCCCCEEEEEE
LFPSHIAHKIIESRYFFIDSYEHRNDGFHVFLKSRNIDEVFQWVLSWGSQVQVLEPNVLS
ECHHHHHHHHHHHHEEEEECCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEEEECCHHHH
EKIRDEAKKMLQL
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]