Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
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Accession | NC_008600 |
Length | 5,257,091 |
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The map label for this gene is 118476588
Identifier: 118476588
GI number: 118476588
Start: 992450
End: 993034
Strand: Reverse
Name: 118476588
Synonym: BALH_0863
Alternate gene names: NA
Gene position: 993034-992450 (Counterclockwise)
Preceding gene: 118476589
Following gene: 118476587
Centisome position: 18.89
GC content: 31.62
Gene sequence:
>585_bases ATGACAAAGGTAAAATTAATGAATCAAAAACGTGTGATTGAAGTAGCTGCAACATTATTTTTAGAAAAAGGGTTTGCTTA TACAAGTATGGATGAATTAGTACGTGTAAGCAAAGTTTCAAAGTCGAATGTGTATTATCACTTTTCTAATAAGGAACAAT TATTAGAAGGAGTCGTTGATTATTGGATTGAAATGTATCAATCTGCAATTGATGACGTACTTTCTCAGAACCAATTTTTA GTTGAAGATCGTATTCAACTGTTTTTAAAGCAATTATCACAAGGAGTTCAGTCGAGAGAGTATAAAGGGAGCTGTCCATT TATTACTCTTTATATTCAAAGTCCTACACAGGCCACGCAAATAAAAGAAAAAATAGGTCTTTTTTTTACAGGATTACAAG AGAAAGTTTCTCTATTACTTAAACAAGGGGTAGAGAATGGAGAATTCAGAAATACGATTCATATTGATGAGGTTGCATCA CTTTTTATTACAAATCTTGAAGGAGCGTTATTTATTTCAGAAACATTGAAGGATGCAACTGTAATCACGAAAACAGCAGA TCACTTTTTAAAATTGCTTCGATAA
Upstream 100 bases:
>100_bases TGCAGTAAAATCAATGTTGGTGGAAATTTTTTAATCAAATTTTTTTTAAAATTAACATAAATACTTGCAATATTTAAATT AGTACTATATAGTTCTAATT
Downstream 100 bases:
>100_bases AAGAAGCATTTTTTTTACATCAAATTAGTACTAAGTAGTACTAAAAGGGGGATTTTATATGAGAACAGTATTTTTAACTG GTGGAACAGGCTTTATTGGA
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR Family Receptor Protein; Transcriptional Regulator Of TetR Family Protein; Regulatory Protein TetR
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MTKVKLMNQKRVIEVAATLFLEKGFAYTSMDELVRVSKVSKSNVYYHFSNKEQLLEGVVDYWIEMYQSAIDDVLSQNQFL VEDRIQLFLKQLSQGVQSREYKGSCPFITLYIQSPTQATQIKEKIGLFFTGLQEKVSLLLKQGVENGEFRNTIHIDEVAS LFITNLEGALFISETLKDATVITKTADHFLKLLR
Sequences:
>Translated_194_residues MTKVKLMNQKRVIEVAATLFLEKGFAYTSMDELVRVSKVSKSNVYYHFSNKEQLLEGVVDYWIEMYQSAIDDVLSQNQFL VEDRIQLFLKQLSQGVQSREYKGSCPFITLYIQSPTQATQIKEKIGLFFTGLQEKVSLLLKQGVENGEFRNTIHIDEVAS LFITNLEGALFISETLKDATVITKTADHFLKLLR >Mature_193_residues TKVKLMNQKRVIEVAATLFLEKGFAYTSMDELVRVSKVSKSNVYYHFSNKEQLLEGVVDYWIEMYQSAIDDVLSQNQFLV EDRIQLFLKQLSQGVQSREYKGSCPFITLYIQSPTQATQIKEKIGLFFTGLQEKVSLLLKQGVENGEFRNTIHIDEVASL FITNLEGALFISETLKDATVITKTADHFLKLLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22244; Mature: 22113
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKVKLMNQKRVIEVAATLFLEKGFAYTSMDELVRVSKVSKSNVYYHFSNKEQLLEGVVD CCCCHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH YWIEMYQSAIDDVLSQNQFLVEDRIQLFLKQLSQGVQSREYKGSCPFITLYIQSPTQATQ HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHH IKEKIGLFFTGLQEKVSLLLKQGVENGEFRNTIHIDEVASLFITNLEGALFISETLKDAT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHH VITKTADHFLKLLR HHHHHHHHHHHHHC >Mature Secondary Structure TKVKLMNQKRVIEVAATLFLEKGFAYTSMDELVRVSKVSKSNVYYHFSNKEQLLEGVVD CCCHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH YWIEMYQSAIDDVLSQNQFLVEDRIQLFLKQLSQGVQSREYKGSCPFITLYIQSPTQATQ HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHH IKEKIGLFFTGLQEKVSLLLKQGVENGEFRNTIHIDEVASLFITNLEGALFISETLKDAT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHH VITKTADHFLKLLR HHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA