Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
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Accession | NC_008600 |
Length | 5,257,091 |
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The map label for this gene is yheD [H]
Identifier: 118476510
GI number: 118476510
Start: 889173
End: 890654
Strand: Reverse
Name: yheD [H]
Synonym: BALH_0778
Alternate gene names: 118476510
Gene position: 890654-889173 (Counterclockwise)
Preceding gene: 118476511
Following gene: 118476509
Centisome position: 16.94
GC content: 36.1
Gene sequence:
>1482_bases ATGAAAGGGGGTAAACCCATTTTGAAAGAGCATATATATACATTAAACATTTCAGATGAACATCCAAATAGTATTACTTT ACCTTATATTTTTTCCATTACACCACCAATTACATCCCTTTCCTTTGGTCTACGCCATGTTGCAAGTGAAGATGTAAAAA TTCATTATTCCTTTACTCGCGAAATCATAATTGGAAAACAAATTGCTGAAAAACTTTTACTGCCTCATTCCACTACTATC CATGCATTCACACAAAATGAAACCATTATTTTCGGACCATTAATCGGGATTTTCACAACTGGTTTTAACGATGACTCTTC TAATCCTTTAGGAAGCCGTTCCACTTCTCTTGGCGAATTACTAACGCCGCCATTCAGCTTACGACCATTTGTATTCGTTT TTGGTGTGCAACATATAGACTGGGAAGATGAAACAATTGAAGGCTATTTCTTTCAAGAGAAACAATGGATAAAGAAAAAA GTTCCTTTACCGAATGTCATTTACGACCGATTACCTAATCGAAAAGCCGAAAATTATAAACCAATCGTAAGAGCAAAAAG AAGGTTAGAGCATGACTATGCGATTCCATGGTTTAATCCAGGTTTTTTTAATAAGTGGGAAGTACATCAACTTCTTATGA AAGACGAATCAATCATGCCGTTATTACCAAACACAGAAACATTTCAGCACTTCGAACAAGTGGAACGGTTTCTCGGAACG TATAAATCGATTTACATGAAACCGATTCACGGCAGCTTCGGTAGAAATATTCATCAACTATTTTATTCTCAAGCAGAGAA TTGCTACTACTGTCGTTATCGCGAAAATGAAGAAAATAAACTAAGAAAGTACCAATCATTAGAAACGCTTCTGAACCATG TGTTAAAAGGACATGATTTAAAAAAATTTATCGTCCAACAAGGTATTTCCTTACTTCGCTTCGATGGGCAACCTGTTGAT TTTCGCATTCATACAAATAAAAATCATTTCGGCCAATGGATGGTCAGTGCAATCGTGGCAAAAATTGCTGGCAAAGGTAG CTTAACAACGCATGTAAATAGCGGTGGCGATACAAAATTGCTGCAAGAACTTTTTCCTGATTCAACGAAACAAATTCAAA TTGAAAATAAATTAAAACATACAGCCTTACAAATTAGTTACGCGCTCGATGAACAAGTAACCGGAAATATTGGAGAAATC GGTTTTGATATCGGTTTAGACACGCAGGAAAACCCATGGCTCTTTGAAGCAAACTCTAAACCAGGGCGAACTGTGTTCCA AGATGCCAAGTTAAAAGAACAAAGTGAACTAACGCGCCAATTATTTTACGAATATGCCATCTACTTAACTGAACATTCTT TGCGCGATACAAAAGAAAAAATGTCTCAAATAAAATCAGAGAATTCCTCAAACAACGAGCATATTCCGTCTCCTATGATT CACTCACGAATACAAAAACAAAAACTTCCACCTCATTCATAA
Upstream 100 bases:
>100_bases TCAACACGATTCCCCCGTACGAACATTACATTCGTCATAGTGATTCATTAGCCGAAAAAATATATCACGGACCATTAAAA TTCAGTCGCTTTACACCATA
Downstream 100 bases:
>100_bases GGTGGAAGTTTTCTATTTACACAAGTTTTACTACAACCTCTGTTTCCACGTTACATACTCCGCAATAAAAAATATGATTG CAATATTCATTTGAATTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 493; Mature: 493
Protein sequence:
>493_residues MKGGKPILKEHIYTLNISDEHPNSITLPYIFSITPPITSLSFGLRHVASEDVKIHYSFTREIIIGKQIAEKLLLPHSTTI HAFTQNETIIFGPLIGIFTTGFNDDSSNPLGSRSTSLGELLTPPFSLRPFVFVFGVQHIDWEDETIEGYFFQEKQWIKKK VPLPNVIYDRLPNRKAENYKPIVRAKRRLEHDYAIPWFNPGFFNKWEVHQLLMKDESIMPLLPNTETFQHFEQVERFLGT YKSIYMKPIHGSFGRNIHQLFYSQAENCYYCRYRENEENKLRKYQSLETLLNHVLKGHDLKKFIVQQGISLLRFDGQPVD FRIHTNKNHFGQWMVSAIVAKIAGKGSLTTHVNSGGDTKLLQELFPDSTKQIQIENKLKHTALQISYALDEQVTGNIGEI GFDIGLDTQENPWLFEANSKPGRTVFQDAKLKEQSELTRQLFYEYAIYLTEHSLRDTKEKMSQIKSENSSNNEHIPSPMI HSRIQKQKLPPHS
Sequences:
>Translated_493_residues MKGGKPILKEHIYTLNISDEHPNSITLPYIFSITPPITSLSFGLRHVASEDVKIHYSFTREIIIGKQIAEKLLLPHSTTI HAFTQNETIIFGPLIGIFTTGFNDDSSNPLGSRSTSLGELLTPPFSLRPFVFVFGVQHIDWEDETIEGYFFQEKQWIKKK VPLPNVIYDRLPNRKAENYKPIVRAKRRLEHDYAIPWFNPGFFNKWEVHQLLMKDESIMPLLPNTETFQHFEQVERFLGT YKSIYMKPIHGSFGRNIHQLFYSQAENCYYCRYRENEENKLRKYQSLETLLNHVLKGHDLKKFIVQQGISLLRFDGQPVD FRIHTNKNHFGQWMVSAIVAKIAGKGSLTTHVNSGGDTKLLQELFPDSTKQIQIENKLKHTALQISYALDEQVTGNIGEI GFDIGLDTQENPWLFEANSKPGRTVFQDAKLKEQSELTRQLFYEYAIYLTEHSLRDTKEKMSQIKSENSSNNEHIPSPMI HSRIQKQKLPPHS >Mature_493_residues MKGGKPILKEHIYTLNISDEHPNSITLPYIFSITPPITSLSFGLRHVASEDVKIHYSFTREIIIGKQIAEKLLLPHSTTI HAFTQNETIIFGPLIGIFTTGFNDDSSNPLGSRSTSLGELLTPPFSLRPFVFVFGVQHIDWEDETIEGYFFQEKQWIKKK VPLPNVIYDRLPNRKAENYKPIVRAKRRLEHDYAIPWFNPGFFNKWEVHQLLMKDESIMPLLPNTETFQHFEQVERFLGT YKSIYMKPIHGSFGRNIHQLFYSQAENCYYCRYRENEENKLRKYQSLETLLNHVLKGHDLKKFIVQQGISLLRFDGQPVD FRIHTNKNHFGQWMVSAIVAKIAGKGSLTTHVNSGGDTKLLQELFPDSTKQIQIENKLKHTALQISYALDEQVTGNIGEI GFDIGLDTQENPWLFEANSKPGRTVFQDAKLKEQSELTRQLFYEYAIYLTEHSLRDTKEKMSQIKSENSSNNEHIPSPMI HSRIQKQKLPPHS
Specific function: Involved in sporulation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Forespore outer membrane; Peripheral membrane protein. Spore wall, spore coat. Note=Forms two rings around the forespore that are offset from its midpoint, before it eventually redistributes to form a shell around the developing spore [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the yheC/yheD family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013816 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57077; Mature: 57077
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGGKPILKEHIYTLNISDEHPNSITLPYIFSITPPITSLSFGLRHVASEDVKIHYSFTR CCCCCCCHHCCEEEEEECCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEEHH EIIIGKQIAEKLLLPHSTTIHAFTQNETIIFGPLIGIFTTGFNDDSSNPLGSRSTSLGEL HHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECHHHHHCCCCCCCCCCCCCCCCCCHHHH LTPPFSLRPFVFVFGVQHIDWEDETIEGYFFQEKQWIKKKVPLPNVIYDRLPNRKAENYK CCCCCCCCCEEEEEECEECCCCCCCCCCEEEHHHHHHHHCCCCCHHHHHHCCCCCCCCCC PIVRAKRRLEHDYAIPWFNPGFFNKWEVHQLLMKDESIMPLLPNTETFQHFEQVERFLGT HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH YKSIYMKPIHGSFGRNIHQLFYSQAENCYYCRYRENEENKLRKYQSLETLLNHVLKGHDL HHHHEEECCCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCH KKFIVQQGISLLRFDGQPVDFRIHTNKNHFGQWMVSAIVAKIAGKGSLTTHVNSGGDTKL HHHHHHCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHH LQELFPDSTKQIQIENKLKHTALQISYALDEQVTGNIGEIGFDIGLDTQENPWLFEANSK HHHHCCCCCCEEEEHHHHHHHHEEEEEHHCCCCCCCCCCEEEEECCCCCCCCEEEECCCC PGRTVFQDAKLKEQSELTRQLFYEYAIYLTEHSLRDTKEKMSQIKSENSSNNEHIPSPMI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH HSRIQKQKLPPHS HHHHHHCCCCCCC >Mature Secondary Structure MKGGKPILKEHIYTLNISDEHPNSITLPYIFSITPPITSLSFGLRHVASEDVKIHYSFTR CCCCCCCHHCCEEEEEECCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEEHH EIIIGKQIAEKLLLPHSTTIHAFTQNETIIFGPLIGIFTTGFNDDSSNPLGSRSTSLGEL HHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECHHHHHCCCCCCCCCCCCCCCCCCHHHH LTPPFSLRPFVFVFGVQHIDWEDETIEGYFFQEKQWIKKKVPLPNVIYDRLPNRKAENYK CCCCCCCCCEEEEEECEECCCCCCCCCCEEEHHHHHHHHCCCCCHHHHHHCCCCCCCCCC PIVRAKRRLEHDYAIPWFNPGFFNKWEVHQLLMKDESIMPLLPNTETFQHFEQVERFLGT HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH YKSIYMKPIHGSFGRNIHQLFYSQAENCYYCRYRENEENKLRKYQSLETLLNHVLKGHDL HHHHEEECCCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCH KKFIVQQGISLLRFDGQPVDFRIHTNKNHFGQWMVSAIVAKIAGKGSLTTHVNSGGDTKL HHHHHHCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHH LQELFPDSTKQIQIENKLKHTALQISYALDEQVTGNIGEIGFDIGLDTQENPWLFEANSK HHHHCCCCCCEEEEHHHHHHHHEEEEEHHCCCCCCCCCCEEEEECCCCCCCCEEEECCCC PGRTVFQDAKLKEQSELTRQLFYEYAIYLTEHSLRDTKEKMSQIKSENSSNNEHIPSPMI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH HSRIQKQKLPPHS HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]