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The map label for this gene is yfkM [H]

Identifier: 118476497

GI number: 118476497

Start: 872630

End: 873145

Strand: Reverse

Name: yfkM [H]

Synonym: BALH_0765

Alternate gene names: 118476497

Gene position: 873145-872630 (Counterclockwise)

Preceding gene: 118476498

Following gene: 118476496

Centisome position: 16.61

GC content: 37.98

Gene sequence:

>516_bases
ATGAGTAAAAAAATTGCTATTTTAATAACGGATTATTTCGAGGACACAGAATACACAGAGCCAGCAGAAGCTTTTAAACA
AAAGGGATATGAATTAACAACTATTGAAGCAGAAAAAGGTAAAACGGTACACGGTAAACAAGGAAAAAGTGAAATTGTAA
TTGATAAAGGTATCGATGATGTTTCTCCAGAAAACTTTGACGCACTCTTCATACCAGGCGGATTTTCTCCAGATATACTT
CGTGCGGATGAGCGTTTCGTTCACTTTAGTAAAGCATTTATGGATGCGGAAAAACCTGTTTTCGCTATTTGTCACGGACC
TCAGCTACTCATCACTGCACAAACACTTGAAGGACGTGATGTCACTGGATATAAATCTATTGAAGTCGATTTAAAAAACG
CCGGCGGAAACTTTCACGATAAAGAAGTAGTTGTATGCCAAAATCAGCTAGTAACAAGTAGACAACCGGAAGACATCCCG
GCGTTTATTGAAGAATCGTTACGTATATTGAGATAG

Upstream 100 bases:

>100_bases
GAATTTACAACTTAGCAAACACTTCAATTGAATCATTTATAGAAGGCATTGCCCAAGGACGATTTTGGAATCGATAATAT
AATGTAAGGAGCGGATTAGA

Downstream 100 bases:

>100_bases
TTATTAGAGGTTAATCAAAGTAGCTATTTAGCTACTTTGATTAACCTTTTTATTTGTATGAAAAACAAAAAAGAATCTTA
TTTTTAATGATCTTTTCATA

Product: protease I, ThiJ/PfpI family protein

Products: NA

Alternate protein names: GSP18 [H]

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MSKKIAILITDYFEDTEYTEPAEAFKQKGYELTTIEAEKGKTVHGKQGKSEIVIDKGIDDVSPENFDALFIPGGFSPDIL
RADERFVHFSKAFMDAEKPVFAICHGPQLLITAQTLEGRDVTGYKSIEVDLKNAGGNFHDKEVVVCQNQLVTSRQPEDIP
AFIEESLRILR

Sequences:

>Translated_171_residues
MSKKIAILITDYFEDTEYTEPAEAFKQKGYELTTIEAEKGKTVHGKQGKSEIVIDKGIDDVSPENFDALFIPGGFSPDIL
RADERFVHFSKAFMDAEKPVFAICHGPQLLITAQTLEGRDVTGYKSIEVDLKNAGGNFHDKEVVVCQNQLVTSRQPEDIP
AFIEESLRILR
>Mature_170_residues
SKKIAILITDYFEDTEYTEPAEAFKQKGYELTTIEAEKGKTVHGKQGKSEIVIDKGIDDVSPENFDALFIPGGFSPDILR
ADERFVHFSKAFMDAEKPVFAICHGPQLLITAQTLEGRDVTGYKSIEVDLKNAGGNFHDKEVVVCQNQLVTSRQPEDIPA
FIEESLRILR

Specific function: Functions in the protection against aldehyde-stress, possibly by degrading damaged proteins [H]

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain [H]

Homologues:

Organism=Escherichia coli, GI87082219, Length=170, Percent_Identity=59.4117647058824, Blast_Score=220, Evalue=5e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: 3.4.-.-

Molecular weight: Translated: 19138; Mature: 19007

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKIAILITDYFEDTEYTEPAEAFKQKGYELTTIEAEKGKTVHGKQGKSEIVIDKGIDD
CCCEEEEEEEECCCCCCCCCHHHHHHHCCCEEEEEECCCCCEECCCCCCCEEEEECCCCC
VSPENFDALFIPGGFSPDILRADERFVHFSKAFMDAEKPVFAICHGPQLLITAQTLEGRD
CCCCCCCEEEECCCCCHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCEEEEEEEECCCCC
VTGYKSIEVDLKNAGGNFHDKEVVVCQNQLVTSRQPEDIPAFIEESLRILR
CCCEEEEEEEEECCCCCCCCCEEEEECCCHHCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SKKIAILITDYFEDTEYTEPAEAFKQKGYELTTIEAEKGKTVHGKQGKSEIVIDKGIDD
CCEEEEEEEECCCCCCCCCHHHHHHHCCCEEEEEECCCCCEECCCCCCCEEEEECCCCC
VSPENFDALFIPGGFSPDILRADERFVHFSKAFMDAEKPVFAICHGPQLLITAQTLEGRD
CCCCCCCEEEECCCCCHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCEEEEEEEECCCCC
VTGYKSIEVDLKNAGGNFHDKEVVVCQNQLVTSRQPEDIPAFIEESLRILR
CCCEEEEEEEEECCCCCCCCCEEEEECCCHHCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377; 9298659 [H]