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The map label for this gene is yndE [H]

Identifier: 118476433

GI number: 118476433

Start: 805573

End: 806682

Strand: Reverse

Name: yndE [H]

Synonym: BALH_0696

Alternate gene names: 118476433

Gene position: 806682-805573 (Counterclockwise)

Preceding gene: 118476434

Following gene: 118476432

Centisome position: 15.34

GC content: 30.72

Gene sequence:

>1110_bases
ATGAATACAATGAATAAATCAAAGACAGTCTCTCCATACTTTGCCTTTATATTATTACATTCACTTCAAATTGGAATAGG
AGTTCTTGGGTATCAACGTGTAATTTTAAAAAACGCTGGTTATGATGCATGGATTTCTCTTATTATTGCAGGGATTGCAA
CCCATATTGTGCTATTTTGTATGTTAAAAATGTTAGAAAAAGATGGAGATTTAATTAGCATTCATACAACAAGTTTTGGA
AAATGGTTTGGCTCTATATTTTCTGTCATTTTCACTCTTTATTGCTTATTATTTTGCCTTACTGTTCTTCGTACATATAT
GGAAGTGATACAAGTTTGGATCTTCCCTACCATTAAGTTATGGAAACTTACCCTTATGTTTTTATTAGTCACTTACTACA
TTATAAAAGGTGGCTTCCGTTCTGTGACAGGGATATGTTTTTGGGGTATTGTACTTCCTATTTTCGTTGTATTCTTTTTA
GTCTATCCAATGAAATACGCTCATTTCCGTAATATTTTACCTATTTTTACACATTCACCTTTTGACATGCTTATATCTGC
AAAACAATCTGCATTAGAGTTTCTCGGCTTTGAAACAATCCTTATCTTCTATCCATTTATTGAAAAAGGTAAGTCTTTAA
AAAGATGGGCTCATGCAGGAATTTTTTTTAGCACTTTGATTTATGTAGTTTTAGCTATTGTATCTTTTATGTATTATAGT
GAAGGACAATTAAATCATACTATTTGGCCTACTTTAACGATGTTAAAAATAATTAAAGTTCCTTTCATTCAACGGTTTGA
ATATATTATTATTTTTGTTTGGTTTCTGATTATTTTGCCAAACCTTTGTTTAACTATTTGGTCATCATGCCAAACGATGA
AGCGTTCATTTCGTATTTCATTTAAATTTACATTACCGTTTTTCATTTTCATCGTTTTTACAGCTTCTTTATTCTTTAAA
AACCGTGAAAGTATCAACACATTAAACACAGTCCTATCTCAAGCTGGCTTATATATTGTATACGCTTATATCCCGATTTT
ATTTGTATTCCATTCACTACGATGGCATTTCAAAAATCGGTCAAAAAAATCTTCACCCGACACACCATAA

Upstream 100 bases:

>100_bases
AAACAAATTCGAAATATGTATAAAAACGTCGCCGTAGATATAAATTTAGATCTTAATATTGTACAATCTGGAATCGGGGA
ATAGTGAGGTGAAATAAGCA

Downstream 100 bases:

>100_bases
TCTCTGATACAATTTGATTAATACATTTGTAAAGGGGACAAGCGTATGAAGAAATATGTATTTTCTTTACTTGCAGTACT
GAGTTTAATTCTTGCTGGAT

Product: GerB family spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MNTMNKSKTVSPYFAFILLHSLQIGIGVLGYQRVILKNAGYDAWISLIIAGIATHIVLFCMLKMLEKDGDLISIHTTSFG
KWFGSIFSVIFTLYCLLFCLTVLRTYMEVIQVWIFPTIKLWKLTLMFLLVTYYIIKGGFRSVTGICFWGIVLPIFVVFFL
VYPMKYAHFRNILPIFTHSPFDMLISAKQSALEFLGFETILIFYPFIEKGKSLKRWAHAGIFFSTLIYVVLAIVSFMYYS
EGQLNHTIWPTLTMLKIIKVPFIQRFEYIIIFVWFLIILPNLCLTIWSSCQTMKRSFRISFKFTLPFFIFIVFTASLFFK
NRESINTLNTVLSQAGLYIVYAYIPILFVFHSLRWHFKNRSKKSSPDTP

Sequences:

>Translated_369_residues
MNTMNKSKTVSPYFAFILLHSLQIGIGVLGYQRVILKNAGYDAWISLIIAGIATHIVLFCMLKMLEKDGDLISIHTTSFG
KWFGSIFSVIFTLYCLLFCLTVLRTYMEVIQVWIFPTIKLWKLTLMFLLVTYYIIKGGFRSVTGICFWGIVLPIFVVFFL
VYPMKYAHFRNILPIFTHSPFDMLISAKQSALEFLGFETILIFYPFIEKGKSLKRWAHAGIFFSTLIYVVLAIVSFMYYS
EGQLNHTIWPTLTMLKIIKVPFIQRFEYIIIFVWFLIILPNLCLTIWSSCQTMKRSFRISFKFTLPFFIFIVFTASLFFK
NRESINTLNTVLSQAGLYIVYAYIPILFVFHSLRWHFKNRSKKSSPDTP
>Mature_369_residues
MNTMNKSKTVSPYFAFILLHSLQIGIGVLGYQRVILKNAGYDAWISLIIAGIATHIVLFCMLKMLEKDGDLISIHTTSFG
KWFGSIFSVIFTLYCLLFCLTVLRTYMEVIQVWIFPTIKLWKLTLMFLLVTYYIIKGGFRSVTGICFWGIVLPIFVVFFL
VYPMKYAHFRNILPIFTHSPFDMLISAKQSALEFLGFETILIFYPFIEKGKSLKRWAHAGIFFSTLIYVVLAIVSFMYYS
EGQLNHTIWPTLTMLKIIKVPFIQRFEYIIIFVWFLIILPNLCLTIWSSCQTMKRSFRISFKFTLPFFIFIVFTASLFFK
NRESINTLNTVLSQAGLYIVYAYIPILFVFHSLRWHFKNRSKKSSPDTP

Specific function: Involved in the germinative response to L-alanine. Could be an amino acid transporter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293
- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 43078; Mature: 43078

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCC
>Mature Secondary Structure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CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]