Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
---|---|
Accession | NC_008600 |
Length | 5,257,091 |
Click here to switch to the map view.
The map label for this gene is ybaR [H]
Identifier: 118476339
GI number: 118476339
Start: 690777
End: 692228
Strand: Direct
Name: ybaR [H]
Synonym: BALH_0595
Alternate gene names: 118476339
Gene position: 690777-692228 (Clockwise)
Preceding gene: 118476338
Following gene: 118476340
Centisome position: 13.14
GC content: 36.85
Gene sequence:
>1452_bases TTGTTTCAGACGATAAAAAATGACTGGTTTTCCAATGTAAAAGGGGACGTGTTATCAGGGGTTGTCGTTGCTTTAGCATT AATTCCGGAAGCGATCGCTTTCTCCGTTATTGCAGGCGTGGATCCGACCGTTGGGTTATACGCAGCCTTTTGTATTGCAG TTACCATTTCATTTGTTGGCGGAAGAACTGGGATGATTTCAGCTGCAACAGGTGCAATGGCATTATTAATGGTAACGCTC GTTAAAGATCACGGTTTACAATATTTATTTGCTACAACAATATTAACAGGTATTGTCCAAATTATTTTTGGCGTATTCAA ACTGAGCTCATTTATGAAGTTTGTTCCGAAATCAGTTATGAGTGGATTTTTAAATGCACTTGGGATTTTAGTTTTTACAG CACAATTGCCACAGTTTAAAAATGCAACTTGGCAAATGTACGCGCTTGTCGCATTAGGACTTGCAATTATATATTTATTT CCACGTATTACGACGGCTGTACCGTCCACACTTATTGCAATTATCATCGTGACAAGTATTGCACTTATGAGTGGATTACA ATTAAAAACAGTAGGGGATATGGGAAGCCTGCCGAAAGAATTACCGTTCTTTAGTATTCCAGACGTGCCTTTTACACTTG AGACATTAGGGATTATTTTACCGTACGCAGTTATGCTTGCAATTATCGGTTTATTAGAGTCATTATTAACAGCTTCAGTT TTAGATGATATGACGCATACGGAAAGTAATAAACATAAGGAAGCACGCGGTCAAGGTATTGCAAACATTGTCGCTGGTTT CTTCGGAGGTATGGCAGGATGTGCAATGATTGGCCAATCTGTTATTAATATTAAATCAGGTGGACGAGGTCGCTTATCGA CGTTTGTAGCGGGCGGATTTTTAATCGTATTACTATTCGTTTTAGGTGATTATGTGGTTCATATTCCGATGGCAGCTTTA GTTGCAGTTATGATTATGGTTTCAATCGGAACATTTGATTGGAACTCTGTAGCAACGATTCATAAAGTACCAAAAGGGAA TGCATTTGTTATGATCGTAACAGTAGTGGTCGTTCTTATTACTCACAATTTAGGATTAGGTGTAGTCATTGGGACAGTAA TTAGTGCCGTGTTATTTGCATTCAATATGGCAAAGATTCACGTGAAACATTTATATATTGAAAATAAGAAAATATACGAA ATTCACGGTCAACTTTTCTTTGCATCTACGGCAGATTTTATAAATAACTTTTCATTCAATGAAGATGTAAAAGAAATTGA AATGAATTTTACCCACGCACACGTATGGGACGATTCAGCAGTGGCATCAATTGATAAAGTTATCATGAAGTATGAACAAA GTGGTGTGAAAGTAAGTATAACAGGATTAAATGAATGTAGCGCAAAACTTGTTACAAATTTAGCTACGTATAATAAAAGA ATTGCTAGTTAG
Upstream 100 bases:
>100_bases AGCACAAAATCCTCTACTCGTTATATAATAACCTTCGTGCAGTCGGCCTTGATTTTCTTACGGAGAAAATCAAATGATAA AAGAGTAGAGGAGTGGTACT
Downstream 100 bases:
>100_bases AAGCCTCCTTTTTAGGGGGCTTTATTATATAATACGGGTAGGATAACGAAAAGGGGATTCAGCATATGTATAAACAAATT ATATTAGCATGTGATGGTTC
Product: sulfate transporter
Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 483; Mature: 483
Protein sequence:
>483_residues MFQTIKNDWFSNVKGDVLSGVVVALALIPEAIAFSVIAGVDPTVGLYAAFCIAVTISFVGGRTGMISAATGAMALLMVTL VKDHGLQYLFATTILTGIVQIIFGVFKLSSFMKFVPKSVMSGFLNALGILVFTAQLPQFKNATWQMYALVALGLAIIYLF PRITTAVPSTLIAIIIVTSIALMSGLQLKTVGDMGSLPKELPFFSIPDVPFTLETLGIILPYAVMLAIIGLLESLLTASV LDDMTHTESNKHKEARGQGIANIVAGFFGGMAGCAMIGQSVINIKSGGRGRLSTFVAGGFLIVLLFVLGDYVVHIPMAAL VAVMIMVSIGTFDWNSVATIHKVPKGNAFVMIVTVVVVLITHNLGLGVVIGTVISAVLFAFNMAKIHVKHLYIENKKIYE IHGQLFFASTADFINNFSFNEDVKEIEMNFTHAHVWDDSAVASIDKVIMKYEQSGVKVSITGLNECSAKLVTNLATYNKR IAS
Sequences:
>Translated_483_residues MFQTIKNDWFSNVKGDVLSGVVVALALIPEAIAFSVIAGVDPTVGLYAAFCIAVTISFVGGRTGMISAATGAMALLMVTL VKDHGLQYLFATTILTGIVQIIFGVFKLSSFMKFVPKSVMSGFLNALGILVFTAQLPQFKNATWQMYALVALGLAIIYLF PRITTAVPSTLIAIIIVTSIALMSGLQLKTVGDMGSLPKELPFFSIPDVPFTLETLGIILPYAVMLAIIGLLESLLTASV LDDMTHTESNKHKEARGQGIANIVAGFFGGMAGCAMIGQSVINIKSGGRGRLSTFVAGGFLIVLLFVLGDYVVHIPMAAL VAVMIMVSIGTFDWNSVATIHKVPKGNAFVMIVTVVVVLITHNLGLGVVIGTVISAVLFAFNMAKIHVKHLYIENKKIYE IHGQLFFASTADFINNFSFNEDVKEIEMNFTHAHVWDDSAVASIDKVIMKYEQSGVKVSITGLNECSAKLVTNLATYNKR IAS >Mature_483_residues MFQTIKNDWFSNVKGDVLSGVVVALALIPEAIAFSVIAGVDPTVGLYAAFCIAVTISFVGGRTGMISAATGAMALLMVTL VKDHGLQYLFATTILTGIVQIIFGVFKLSSFMKFVPKSVMSGFLNALGILVFTAQLPQFKNATWQMYALVALGLAIIYLF PRITTAVPSTLIAIIIVTSIALMSGLQLKTVGDMGSLPKELPFFSIPDVPFTLETLGIILPYAVMLAIIGLLESLLTASV LDDMTHTESNKHKEARGQGIANIVAGFFGGMAGCAMIGQSVINIKSGGRGRLSTFVAGGFLIVLLFVLGDYVVHIPMAAL VAVMIMVSIGTFDWNSVATIHKVPKGNAFVMIVTVVVVLITHNLGLGVVIGTVISAVLFAFNMAKIHVKHLYIENKKIYE IHGQLFFASTADFINNFSFNEDVKEIEMNFTHAHVWDDSAVASIDKVIMKYEQSGVKVSITGLNECSAKLVTNLATYNKR IAS
Specific function: Possible Sulfate Transporter. [C]
COG id: COG0659
COG function: function code P; Sulfate permease and related transporters (MFS superfamily)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 STAS domain [H]
Homologues:
Organism=Homo sapiens, GI16418457, Length=386, Percent_Identity=23.0569948186528, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI301601599, Length=386, Percent_Identity=23.0569948186528, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI94721259, Length=466, Percent_Identity=20.3862660944206, Blast_Score=66, Evalue=6e-11, Organism=Homo sapiens, GI94721253, Length=466, Percent_Identity=20.3862660944206, Blast_Score=66, Evalue=7e-11, Organism=Homo sapiens, GI94721255, Length=466, Percent_Identity=20.3862660944206, Blast_Score=66, Evalue=7e-11, Organism=Homo sapiens, GI94721257, Length=466, Percent_Identity=20.3862660944206, Blast_Score=66, Evalue=9e-11, Organism=Escherichia coli, GI87081859, Length=493, Percent_Identity=26.7748478701826, Blast_Score=137, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17566848, Length=557, Percent_Identity=23.3393177737882, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24649801, Length=508, Percent_Identity=21.0629921259843, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI24651449, Length=520, Percent_Identity=23.2692307692308, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI21358229, Length=138, Percent_Identity=34.7826086956522, Blast_Score=76, Evalue=5e-14, Organism=Drosophila melanogaster, GI85815873, Length=428, Percent_Identity=23.8317757009346, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI19922482, Length=433, Percent_Identity=23.5565819861432, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI24647160, Length=122, Percent_Identity=29.5081967213115, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI21355087, Length=122, Percent_Identity=29.5081967213115, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018045 - InterPro: IPR002645 - InterPro: IPR001902 - InterPro: IPR011547 [H]
Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]
EC number: NA
Molecular weight: Translated: 51805; Mature: 51805
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQTIKNDWFSNVKGDVLSGVVVALALIPEAIAFSVIAGVDPTVGLYAAFCIAVTISFVG CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC GRTGMISAATGAMALLMVTLVKDHGLQYLFATTILTGIVQIIFGVFKLSSFMKFVPKSVM CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGFLNALGILVFTAQLPQFKNATWQMYALVALGLAIIYLFPRITTAVPSTLIAIIIVTSI HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALMSGLQLKTVGDMGSLPKELPFFSIPDVPFTLETLGIILPYAVMLAIIGLLESLLTASV HHHCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDDMTHTESNKHKEARGQGIANIVAGFFGGMAGCAMIGQSVINIKSGGRGRLSTFVAGGF HHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHH LIVLLFVLGDYVVHIPMAALVAVMIMVSIGTFDWNSVATIHKVPKGNAFVMIVTVVVVLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEECCCCCEEHHHHHHHHHHH THNLGLGVVIGTVISAVLFAFNMAKIHVKHLYIENKKIYEIHGQLFFASTADFINNFSFN HCCCCHHHHHHHHHHHHHHHHHHHHHEEEHEEECCCEEEEEECCEEEEEHHHHHHCCCCC EDVKEIEMNFTHAHVWDDSAVASIDKVIMKYEQSGVKVSITGLNECSAKLVTNLATYNKR CCHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHH IAS HCC >Mature Secondary Structure MFQTIKNDWFSNVKGDVLSGVVVALALIPEAIAFSVIAGVDPTVGLYAAFCIAVTISFVG CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC GRTGMISAATGAMALLMVTLVKDHGLQYLFATTILTGIVQIIFGVFKLSSFMKFVPKSVM CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGFLNALGILVFTAQLPQFKNATWQMYALVALGLAIIYLFPRITTAVPSTLIAIIIVTSI HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALMSGLQLKTVGDMGSLPKELPFFSIPDVPFTLETLGIILPYAVMLAIIGLLESLLTASV HHHCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDDMTHTESNKHKEARGQGIANIVAGFFGGMAGCAMIGQSVINIKSGGRGRLSTFVAGGF HHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHH LIVLLFVLGDYVVHIPMAALVAVMIMVSIGTFDWNSVATIHKVPKGNAFVMIVTVVVVLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEECCCCCEEHHHHHHHHHHH THNLGLGVVIGTVISAVLFAFNMAKIHVKHLYIENKKIYEIHGQLFFASTADFINNFSFN HCCCCHHHHHHHHHHHHHHHHHHHHHEEEHEEECCCEEEEEECCEEEEEHHHHHHCCCCC EDVKEIEMNFTHAHVWDDSAVASIDKVIMKYEQSGVKVSITGLNECSAKLVTNLATYNKR CCHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHH IAS HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]
Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9274029; 9384377 [H]